Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O12
(932 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g77390.1 68414.m09012 cyclin, putative similar to mitotic cyc... 34 0.16
At1g19870.1 68414.m02492 calmodulin-binding family protein conta... 34 0.16
At5g07820.1 68418.m00896 expressed protein 33 0.27
At3g61780.1 68416.m06931 expressed protein ; expression supporte... 33 0.36
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 32 0.63
At3g58110.1 68416.m06480 expressed protein 31 1.1
At1g48610.1 68414.m05437 AT hook motif-containing protein contai... 31 1.4
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 30 1.9
At1g30860.1 68414.m03774 expressed protein 30 1.9
At4g33700.1 68417.m04786 CBS domain-containing protein contains ... 30 2.5
At3g18100.2 68416.m02302 myb family transcription factor (MYB4R1... 30 2.5
At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1... 30 2.5
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 3.3
At3g09670.1 68416.m01146 PWWP domain-containing protein 29 3.3
At3g02990.1 68416.m00294 heat shock factor protein 2 (HSF2) / he... 29 3.3
At5g04990.1 68418.m00528 sad1/unc-84 protein-related contains we... 29 4.4
At4g00020.1 68417.m00002 BRCA2 repeat-containing protein low sim... 29 4.4
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR... 29 5.8
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 29 5.8
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 29 5.8
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 29 5.8
At3g26070.1 68416.m03246 plastid-lipid associated protein PAP / ... 29 5.8
At1g35340.3 68414.m04382 ATP-dependent protease La (LON) domain-... 29 5.8
At1g35340.2 68414.m04381 ATP-dependent protease La (LON) domain-... 29 5.8
At1g35340.1 68414.m04380 ATP-dependent protease La (LON) domain-... 29 5.8
At1g27500.1 68414.m03352 kinesin light chain-related low similar... 29 5.8
At5g62650.1 68418.m07863 expressed protein 28 7.7
At5g51660.1 68418.m06405 cleavage and polyadenylation specificit... 28 7.7
At3g52890.2 68416.m05829 protein kinase (KIPK) identical to prot... 28 7.7
At3g52890.1 68416.m05828 protein kinase (KIPK) identical to prot... 28 7.7
At3g49800.1 68416.m05445 BSD domain-containing protein contains ... 28 7.7
At2g41960.1 68415.m05191 expressed protein 28 7.7
At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger) fa... 28 7.7
>At1g77390.1 68414.m09012 cyclin, putative similar to mitotic cyclin
a2-type [Glycine max] GI:857397; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 442
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 314 SHKDSLKIPNKRKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKML 493
S ++ + PN K + L+DV +RA GDITN N S P + ++K
Sbjct: 9 SQENPIPRPNLAKTRTSLRDVGNRRAPLGDITNQKNGSRNPSPSSTLVNCSNKIGQSKKA 68
Query: 494 P 496
P
Sbjct: 69 P 69
>At1g19870.1 68414.m02492 calmodulin-binding family protein contains
Pfam profile: PF00612 IQ calmodulin-binding motif
Length = 794
Score = 33.9 bits (74), Expect = 0.16
Identities = 41/186 (22%), Positives = 72/186 (38%)
Frame = +2
Query: 281 TTRSKQLASLKSHKDSLKIPNKRKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMP 460
+T S + +L S D L K DSP T K + D+T A S + + ++
Sbjct: 476 STGSNKAMTLSSKDDVLGEEGKTDIDSPDTTNTIKDHSLEDVTPA-ELSGSECGTELSVT 534
Query: 461 VKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVATR 640
T+E K + + L T KT Q + + + DA +D PK+
Sbjct: 535 SSLDTLEKKSDAEGAEPRVEAKLLEDDTFKTDQAELIEIDVKDATSMGTVED-PKEKVEN 593
Query: 641 AQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQIS 820
A++ + E E +S K R++ P Y + ++P +T+ + S
Sbjct: 594 AKDEV----EISATHHEPVISTPDSKKRRAEDESGPQAYALSEGALTPMTITESQATPAS 649
Query: 821 EKLNKV 838
+ + V
Sbjct: 650 QASSSV 655
>At5g07820.1 68418.m00896 expressed protein
Length = 561
Score = 33.1 bits (72), Expect = 0.27
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 6/219 (2%)
Frame = +2
Query: 221 LATKPLGVNENLN---GMLSHGITTRSKQLASL-KSHKDSLKIPNKRKADSPLKDVTAKR 388
L KP V + N G L G T R K L ++ K K SL+ + A +K
Sbjct: 96 LVIKPWKVAKKKNVDSGDLGKGETLR-KSLGNVSKPDKSSLQAAKREAAGEVVKSCDGLH 154
Query: 389 AAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQR 568
+ + KS +P VKK + + KS L+ K K K+ +
Sbjct: 155 -----VKKSETKSTSPSVSPVVRTVKKTNLVVNKASRISQNKSPKEDLS-KNLKNKEKGK 208
Query: 569 VAN--NAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSG 742
+ D ++K T K+V+ ++N ++D LK + + DV
Sbjct: 209 IVEPVRCDDVLEK--TDLEVKKVSRISEN----KSSKEDTLKNKEKAKIDEPVRCDDVLE 262
Query: 743 EPSLYMTALENISPSEVTKEEYKQISEKLNKVNLDDTSR 859
+ SL + IS ++ +KEE + + K N+D+ R
Sbjct: 263 KTSLDAQKVSRISENKNSKEERLKNLKNKEKTNIDEPVR 301
>At3g61780.1 68416.m06931 expressed protein ; expression supported
by MPSS
Length = 1121
Score = 32.7 bits (71), Expect = 0.36
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Frame = +2
Query: 419 NKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAV- 595
N A DK+K V ++ + K Q S + T + ++ R A + +
Sbjct: 440 NHEMAASDKEKVSNVVPPVPTDGVIQSSDVSKDQLSMMKNSTGRKSRVIRSVKEAKEFLS 499
Query: 596 ----QKHFTKDPPKQVATRA----------QNGILKNFERKDKLKEQNLS-NGSVKSARS 730
+K T++P + +A + + G+ + E DK K + NG++KSA
Sbjct: 500 RRSGEKELTQEPSQMIAQDSVEIFSKQSDEERGVARKHELVDKNKILGAAVNGTLKSALE 559
Query: 731 DVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKV 838
S EP L + + K +Y+++SE N V
Sbjct: 560 STSSEP------LGKDADCQPQKNDYQKLSEPGNAV 589
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 31.9 bits (69), Expect = 0.63
Identities = 24/116 (20%), Positives = 46/116 (39%)
Frame = +2
Query: 410 NAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAID 589
N NKS +++D + + K+ K ++S T K + K+ + +
Sbjct: 294 NQANKS--EEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEE 351
Query: 590 AVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLY 757
++ +D K+ + +K E K+K+KE+ + G K PS Y
Sbjct: 352 KEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESAEGKKKEVVKGKKESPSAY 407
>At3g58110.1 68416.m06480 expressed protein
Length = 784
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 7/135 (5%)
Frame = +2
Query: 503 KSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKH----FTKDPPKQVATRAQNGILKNFE 670
+S+ +Q +N SKT +Q + + Q+ + + ++ T G K +
Sbjct: 603 QSVINQQYLMNELQSKTAMIQELERTKFEEQQRKDIMIYKLESELRMMTSVVEGYRKALK 662
Query: 671 RKDKLKEQNLSNGSVKSARS---DVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVN 841
K ++ ++ + DV G L ++ E I + +EE ++ L K
Sbjct: 663 ITQKASREHRKRCPLRDDKQVYMDVKGSGGLVLSTTE-IEKLRLKQEEEDRMQRVLAKRQ 721
Query: 842 LDDTSRSWMXNRDPH 886
+DD +W+ + H
Sbjct: 722 IDDFEHNWLNKFEEH 736
>At1g48610.1 68414.m05437 AT hook motif-containing protein contains
Pfam profile PF02178: AT hook motif
Length = 212
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 347 RKADSPLKDVTAKRAAFGD--ITNAYNKSCAPQDKDKAMPVKKVTVETKMLPA---VKSI 511
RK P KD A + + A + P + A PV++ T + P V +
Sbjct: 118 RKRGRPKKDDVAAATVPAETVVAPAKRRGRKPTVEVAAQPVRRTRKSTSVAPVAANVGDL 177
Query: 512 KSQTSTLNGKTSKTKQLQRVANNAIDAVQK 601
K +T+ L K + + A AID VQK
Sbjct: 178 KKRTALLQKKVKEAAAKLKQAVTAIDEVQK 207
>At4g20160.1 68417.m02949 expressed protein ; expression supported by
MPSS
Length = 1188
Score = 30.3 bits (65), Expect = 1.9
Identities = 43/236 (18%), Positives = 93/236 (39%), Gaps = 4/236 (1%)
Frame = +2
Query: 197 RSVMAPTRLATKPLGVNENLNGMLSHGITTRSKQLASLKSHKDSLKIPNKRKADSPLKDV 376
RS+ K +G ++ S G TTRS ++ K +D + K K K++
Sbjct: 692 RSIDTSWITVVKVVGDRVIMDKRKSSGETTRSAEIGGGKKEEDLASVEAKSKDVIEDKNM 751
Query: 377 TAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTK 556
+ G ++ + ++ TK + + + + S +G K K
Sbjct: 752 NPQAVIHGSKERDKERNSSQNGEETLSLRNSEAKSTKEIERQEVTQEEKSVSHGSREKDK 811
Query: 557 QLQRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSAR--- 727
+ N++ +K + +T+ I +N ++ E++ S+GS +SA+
Sbjct: 812 E-----RNSLQYGEKMCFLRNSEAKSTKE---IERNKSQEVSQGEESASHGSRESAKEKN 863
Query: 728 -SDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVNLDDTSRSWMXNRDPHKL 892
S E S + + E EE K++ + N+++ S ++ + D +++
Sbjct: 864 SSQQDDETSTHRNPNDKKGIKEPEDEESKKVEREETGENVEEASVEFVNDWDGNEM 919
>At1g30860.1 68414.m03774 expressed protein
Length = 730
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 563 QRVANNAIDAVQKHFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSG 742
+++ N + VQ H K K + + + NFE +++KE+ L G + R D+S
Sbjct: 532 EKIDNLMMSRVQTHSDKHSKKWELQQEEEEEV-NFEIDEEIKEEPLRGGEEQDDRDDLSQ 590
Query: 743 EPSLYMTA 766
S +++A
Sbjct: 591 SSSSHISA 598
>At4g33700.1 68417.m04786 CBS domain-containing protein contains
Pfam profiles PF00571: CBS domain, PF01595: Domain of
unknown function
Length = 424
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 677 DKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKVNLDDTS 856
DK+ NGSVK AR DV E + T E + ++ + +++K + + S
Sbjct: 310 DKIHPLPSKNGSVKEARVDVDSEGT--PTPQERMLRTKRSLQKWKSFPNRASSFKGGSKS 367
Query: 857 RSWMXNRD 880
+ W + D
Sbjct: 368 KKWSKDND 375
>At3g18100.2 68416.m02302 myb family transcription factor (MYB4R1)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 634
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Frame = +2
Query: 659 KNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKV 838
KN + K + Q + SD+ G T E+I E+T E +Q K+N
Sbjct: 144 KNLAKGLKQEVQKILLSEAIERSSDLEGATYDIDTINESIGNLEITPEMIRQFLPKINWD 203
Query: 839 NLDDTSRS-------WMXNRDP 883
+LD RS WM + DP
Sbjct: 204 SLDIKDRSAAECEARWMSSEDP 225
>At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 847
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Frame = +2
Query: 659 KNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEEYKQISEKLNKV 838
KN + K + Q + SD+ G T E+I E+T E +Q K+N
Sbjct: 357 KNLAKGLKQEVQKILLSEAIERSSDLEGATYDIDTINESIGNLEITPEMIRQFLPKINWD 416
Query: 839 NLDDTSRS-------WMXNRDP 883
+LD RS WM + DP
Sbjct: 417 SLDIKDRSAAECEARWMSSEDP 438
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 29.5 bits (63), Expect = 3.3
Identities = 34/146 (23%), Positives = 69/146 (47%)
Frame = +2
Query: 422 KSCAPQDKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQK 601
K+ A +D+ K+++ + K + +I+S+ + + +++A AI A+Q+
Sbjct: 501 KALATASRDELRMAKELSEQAKR--GMSTIESRLVEAKKEMEAARASEKLALAAIKALQE 558
Query: 602 HFTKDPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENIS 781
+ +++ + I+ + E +L +Q L S + A + +S E +S
Sbjct: 559 TESSQRFEEI-NNSPRSIIISVEEYYELSKQALE--SEEEANTRLS----------EIVS 605
Query: 782 PSEVTKEEYKQISEKLNKVNLDDTSR 859
EV KEE +I EKL +VN + + R
Sbjct: 606 QIEVAKEEESRILEKLEEVNREMSVR 631
>At3g09670.1 68416.m01146 PWWP domain-containing protein
Length = 726
Score = 29.5 bits (63), Expect = 3.3
Identities = 29/92 (31%), Positives = 41/92 (44%)
Frame = +2
Query: 614 DPPKQVATRAQNGILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEV 793
D + V+ RAQ ++ L E GSV+SA +S P+ ++L +S E
Sbjct: 356 DALQLVSQRAQLLAFNRWKGYTDLPEFMTLQGSVESAPK-IS--PAEEQSSLVEVSDPEP 412
Query: 794 TKEEYKQISEKLNKVNLDDTSRSWMXNRDPHK 889
TK KQ+ K K NL S + DP K
Sbjct: 413 TKS--KQVYTKRRKTNLQTEQSSLVEVSDPDK 442
>At3g02990.1 68416.m00294 heat shock factor protein 2 (HSF2) / heat
shock transcription factor 2 (HSTF2) identical to heat
shock transcription factor 2 (HSF2) SP:Q96320 from
[Arabidopsis thaliana]; contains Pfam profile: PF00447
HSF-type DNA-binding domain
Length = 468
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +2
Query: 485 KMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTK--DPPKQVATRAQNG-- 652
+ LP + S + +NG + + + Q N+A + + + + + P + + NG
Sbjct: 226 RRLPVEDQMNSGSHGVNGLSRQIVRYQSSMNDATNTMLQQIQQMSNAPSHESLSSNNGSF 285
Query: 653 ILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTK 799
+L + + + SNGS + +DVS P+ + A++ P E +
Sbjct: 286 LLGDVPNSNISDNGSSSNGSPEVTLADVSSIPAGFYPAMKYHEPCETNQ 334
>At5g04990.1 68418.m00528 sad1/unc-84 protein-related contains weak
similarity to Sad1/unc-84 protein-like 1
(Swiss-Prot:O94901) [Homo sapiens]
Length = 471
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 659 KNFERKDKLKEQNLSN--GSVKSARSDVSGEPSLYMTALENISPSE-VTKEEYKQISEKL 829
K ER+ K+ Q + + +S + +++ ++ VTK+E ++I E+L
Sbjct: 181 KKMEREAKVLRQEIERKASAFQSELKKIESRTESLEKSVDEVNAKPWVTKDELERIYEEL 240
Query: 830 NKVNLDDTSRS 862
K N+DD++ S
Sbjct: 241 KKGNVDDSAFS 251
>At4g00020.1 68417.m00002 BRCA2 repeat-containing protein low
similarity to SP|P51587 Breast cancer type 2
susceptibility protein {Homo sapiens}; contains Pfam
profile PF00634: BRCA2 repeat
Length = 765
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2
Query: 347 RKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVKSIKS 517
R AD PL D+T +R D AYNK + Q K K V+V P + S K+
Sbjct: 418 RPADQPLVDITNRR----DTAYAYNKQDSTQKKRLG---KTVSVSPFKRPRISSFKT 467
>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 377 TAKRAAFGDITNAYNKSCAPQDKDKAMPVKKV--TVETKMLPAVKSIKSQTSTLNGKTSK 550
T +A F +++A++ SC +D DK++ K + +E ++LP + + S+L + +
Sbjct: 187 TLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGNDATIMKLSSLRDRLNS 246
Query: 551 TKQL 562
+ L
Sbjct: 247 KRVL 250
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 529 TKWQNFKDQTTPAGSQ*CY*CSTETFHQRPTQASGHKSSEWH 654
T WQ Q P+ S Y T F PTQ + SSE H
Sbjct: 66 TVWQLMMTQLAPSDSSGSYTRPTSKFRLDPTQFTSAASSELH 107
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 779 SPSEVTKEEYKQISEKLNKVNLDDTSRSW 865
SP EVT+EEY + L+K D+ +W
Sbjct: 351 SPKEVTEEEYTKFYHSLSKDFTDEKPMAW 379
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 779 SPSEVTKEEYKQISEKLNKVNLDDTSRSW 865
SP EVT+EEY + L+K D+ +W
Sbjct: 351 SPKEVTEEEYTKFYHSLSKDFTDEKPMAW 379
>At3g26070.1 68416.m03246 plastid-lipid associated protein PAP /
fibrillin family protein contains Pfam profile PF04755:
PAP_fibrillin
Length = 242
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 449 KAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQ 628
K +K E + A+ S T NG+ K KQL++ AI+ +++ T P Q
Sbjct: 37 KLQSTRKGDRERLRVQAIFSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQ 96
Query: 629 V 631
+
Sbjct: 97 L 97
>At1g35340.3 68414.m04382 ATP-dependent protease La (LON)
domain-containing protein contains Pfam profile PF02190:
ATP-dependent protease La (LON) domain
Length = 210
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 194 SRSVMAPTRLATKPLGVNENLNGMLSHGITTRSKQLASLKSHKDSLKIPNKRKADSPLK 370
SR + A L+ + + + +N S+ +T++ QL + +SL+I K ADSPL+
Sbjct: 60 SRFLGADPYLSGEVRPIQDRMNYESSNELTSKISQLKESIKNLNSLEIKLKAPADSPLQ 118
>At1g35340.2 68414.m04381 ATP-dependent protease La (LON)
domain-containing protein contains Pfam profile PF02190:
ATP-dependent protease La (LON) domain
Length = 210
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 194 SRSVMAPTRLATKPLGVNENLNGMLSHGITTRSKQLASLKSHKDSLKIPNKRKADSPLK 370
SR + A L+ + + + +N S+ +T++ QL + +SL+I K ADSPL+
Sbjct: 60 SRFLGADPYLSGEVRPIQDRMNYESSNELTSKISQLKESIKNLNSLEIKLKAPADSPLQ 118
>At1g35340.1 68414.m04380 ATP-dependent protease La (LON)
domain-containing protein contains Pfam profile PF02190:
ATP-dependent protease La (LON) domain
Length = 293
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 194 SRSVMAPTRLATKPLGVNENLNGMLSHGITTRSKQLASLKSHKDSLKIPNKRKADSPLK 370
SR + A L+ + + + +N S+ +T++ QL + +SL+I K ADSPL+
Sbjct: 143 SRFLGADPYLSGEVRPIQDRMNYESSNELTSKISQLKESIKNLNSLEIKLKAPADSPLQ 201
>At1g27500.1 68414.m03352 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 650
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 494 PAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQVAT 637
PAV S+ + + L +T K ++ + NA+ + H + P+++A+
Sbjct: 398 PAVGSVYIRLADLYNRTGKVREAKSYCENALRIYESHNLEISPEEIAS 445
>At5g62650.1 68418.m07863 expressed protein
Length = 529
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 653 ILKNFERKDKLKEQNLSNGSVKSARSDVSGEPSLYMTALENISPSEVTKEE 805
++ +FER+ Q S + + V + S + +E+ SPSE K +
Sbjct: 350 LVDSFERRSAFSIQRASGSATRCLGDSVEADTSASLLRVEDDSPSEAEKRQ 400
>At5g51660.1 68418.m06405 cleavage and polyadenylation specificity
factor (CPSF) A subunit C-terminal domain-containing
protein similar to SP|Q9EPU4 Cleavage and
polyadenylation specificity factor, 160 kDa subunit
(CPSF 160 kDa subunit) {Mus musculus}; contains Pfam
profile PF03178: CPSF A subunit region
Length = 1442
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 233 PLGVNENLNGMLSHGITTRSKQLASLKSHKD-SLKIPNKRKADSPLKDVTAKRA 391
P GV +G ++H ++ + Q+ + H D + PN ++ PL +V A
Sbjct: 12 PTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNVVITAA 65
>At3g52890.2 68416.m05829 protein kinase (KIPK) identical to protein
kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 934
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 440 DKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDP 619
D++ A P VE ++ K + S S + K + T+ + ++++A+D+ QK D
Sbjct: 261 DENVASPSTHAFVEDDVIEIDKHVTSLPSHSSKKVNATELDKNISSSAVDSEQKGKLDDA 320
Query: 620 P 622
P
Sbjct: 321 P 321
>At3g52890.1 68416.m05828 protein kinase (KIPK) identical to protein
kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 934
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 440 DKDKAMPVKKVTVETKMLPAVKSIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDP 619
D++ A P VE ++ K + S S + K + T+ + ++++A+D+ QK D
Sbjct: 261 DENVASPSTHAFVEDDVIEIDKHVTSLPSHSSKKVNATELDKNISSSAVDSEQKGKLDDA 320
Query: 620 P 622
P
Sbjct: 321 P 321
>At3g49800.1 68416.m05445 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 428
Score = 28.3 bits (60), Expect = 7.7
Identities = 25/101 (24%), Positives = 41/101 (40%)
Frame = +2
Query: 326 SLKIPNKRKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAVK 505
S ++ KR D+ + ++ R A + + P K + PVK +TVET +
Sbjct: 268 SHELLRKRNKDTVVVPESSDRGADSENVEPLFQPTNPSPKSEPEPVKTITVET-----IH 322
Query: 506 SIKSQTSTLNGKTSKTKQLQRVANNAIDAVQKHFTKDPPKQ 628
S + T +TK++Q V I+ D P Q
Sbjct: 323 SAERSEFETEKHTVETKEVQVVDKPVIEERPAPAYHDKPVQ 363
>At2g41960.1 68415.m05191 expressed protein
Length = 1215
Score = 28.3 bits (60), Expect = 7.7
Identities = 47/219 (21%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Frame = +2
Query: 161 NIYNITARAVKSRSVMAPTRLATK--PLGVNENLNGML-SHGITTRSKQLASLKSHK-DS 328
N Y + + RS M +R A K P+ V + L+ + H + + + SL ++K +
Sbjct: 774 NRYTQSGYRREIRSKMNNSRNACKMDPVNVRKVLDSVEPKHSRNSSTSDVLSLTTYKAEE 833
Query: 329 LK--IPNKRKADSPLKDVTAKRAAFGDITNAYNKSCAPQDKDKAMPVKKVTVETKMLPAV 502
+K P + A +P + G N+ + DK M V +T++ L +
Sbjct: 834 IKDVSPTVKPAGTPSLCKATDKLGNGSFNNS-------TEVDKKMEVH-ITLKNDYLYSK 885
Query: 503 KSIKSQTSTLNGKTSKTKQLQ--RVANNAIDAVQK--HFTKDPPKQVATRAQNGILKNFE 670
+ S++S+ N ++ + VA+ + + D P + + +
Sbjct: 886 DPMMSRSSSSNNGNIESSSMSDSEVASQQSEGRENLVDTQNDMPDCHEKMVEKVTEMSMD 945
Query: 671 RKDKLKEQNLSNGSVKSARSDVSGEPSLYMTA-LENISP 784
+D LK +N+SN + S +SG P + + +EN+ P
Sbjct: 946 ERDVLKIKNISNLPADNGESKLSGTPFMVPSQNMENMVP 984
>At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 227
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 688 FEFVFPFKILQDAILSSCGHLLGW 617
FE F++ QD I++ CGHL W
Sbjct: 26 FECNICFELAQDPIVTLCGHLFCW 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,576,332
Number of Sequences: 28952
Number of extensions: 384500
Number of successful extensions: 1125
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2227127592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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