Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O11
(882 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 89 6e-18
SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10) 50 3e-06
SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24) 41 0.001
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 41 0.001
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 41 0.002
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 40 0.002
SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42) 40 0.002
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 40 0.004
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_43456| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 39 0.006
SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06) 38 0.008
SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34) 38 0.014
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 37 0.019
SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20) 36 0.033
SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22) 36 0.043
SB_42279| Best HMM Match : WD40 (HMM E-Value=2.2e-10) 36 0.043
SB_50716| Best HMM Match : WD40 (HMM E-Value=0) 35 0.076
SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 35 0.10
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22) 33 0.23
SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11) 33 0.31
SB_38341| Best HMM Match : TFIID_90kDa (HMM E-Value=4.6e-19) 33 0.31
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 33 0.40
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 33 0.40
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 33 0.40
SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 32 0.53
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 32 0.53
SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16) 32 0.53
SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42) 32 0.53
SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28) 32 0.71
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18) 32 0.71
SB_56394| Best HMM Match : WD40 (HMM E-Value=6.2e-10) 31 0.93
SB_52292| Best HMM Match : WD40 (HMM E-Value=1.6e-09) 31 0.93
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_38974| Best HMM Match : WD40 (HMM E-Value=1.1e-19) 31 1.6
SB_35708| Best HMM Match : WD40 (HMM E-Value=1.2) 31 1.6
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 30 2.2
SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14) 30 2.2
SB_19792| Best HMM Match : SspH (HMM E-Value=6.6) 30 2.2
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18) 30 2.9
SB_9467| Best HMM Match : PAN (HMM E-Value=3e-05) 30 2.9
SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45) 29 3.8
SB_35567| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_50270| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_42943| Best HMM Match : WD40 (HMM E-Value=0) 29 5.0
SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.0
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21) 29 5.0
SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07) 29 6.6
SB_8327| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10) 29 6.6
SB_1661| Best HMM Match : WD40 (HMM E-Value=5e-13) 29 6.6
SB_39595| Best HMM Match : WD40 (HMM E-Value=1.10001e-40) 28 8.7
SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30) 28 8.7
SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08) 28 8.7
SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_46201| Best HMM Match : WD40 (HMM E-Value=0) 28 8.7
SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_3333| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 88.6 bits (210), Expect = 6e-18
Identities = 45/72 (62%), Positives = 48/72 (66%)
Frame = +3
Query: 666 GGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCALWDXXTG 845
GGLDNICSIYSLKTR G VRVSRELPGH+ DD I+TSSGDMTCALWD T
Sbjct: 53 GGLDNICSIYSLKTREGNVRVSRELPGHT---------DDCQIITSSGDMTCALWDIETA 103
Query: 846 HXCGXFXGXPGD 881
+ G GD
Sbjct: 104 QTISTYSGHTGD 115
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/62 (61%), Positives = 50/62 (80%)
Frame = +2
Query: 323 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 502
M+EL+ LRQE+E LK IRDARK A DT+LAQ ++N++ +GRIQMRTRRTLRG L I +
Sbjct: 1 MSELEQLRQESEALKCQIRDARKIAADTTLAQVSANIDQVGRIQMRTRRTLRGGLDNICS 60
Query: 503 MH 508
++
Sbjct: 61 IY 62
>SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10)
Length = 345
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 SLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQ--DGKLIVWDSHT 580
++ + LE + M+ RR L+GH K+ +M W D R+LVS+SQ D ++WD T
Sbjct: 199 TVKDVSRKLESLQGCHMKVRRILKGHQGKVLSMDWSGDCRHLVSSSQGCDRAALIWDIRT 258
Query: 581 TNKVHAIPLRSS 616
V++ S+
Sbjct: 259 GRIVNSFASHSA 270
>SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24)
Length = 208
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 604
+LRGH+ +Y + W +D R + S S D L VWD T ++ +P
Sbjct: 96 SLRGHVNCVYQIAWSADCRLICSGSADSTLKVWDMKTKKLLYDLP 140
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 452 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK 589
Q T L+GH++K+ A+ + + S+ L+S +DG ++VWD K
Sbjct: 119 QQGTAFELQGHISKVQALCFAAHSKKLISCGEDGAIMVWDMRIKRK 164
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 645 SGSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFL-DDNXILTSSGDMTC 821
S V+CG DN ++ ++ + +S GH ++CC F DD+ I++ S D T
Sbjct: 522 SSKVVSCG-TDNHVKVWDSQSGRQLLSIS----GHGDVVNCCAFSHDDSRIISCSADQTV 576
Query: 822 ALWDXXTGHXCGXFXG 869
+WD +G F G
Sbjct: 577 KIWDASSGEGVLCFVG 592
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 479 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
GH ++++ + D VS S D + VWDS T H + V C ++P G
Sbjct: 592 GHTQEVFSCSFSPDDTKAVSCSADRTVKVWDSKTGVCYHVYMAHTDIVRWCCFSPDG 648
Score = 36.7 bits (81), Expect = 0.025
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 311 RVLIMNELDS-LRQEAETLKNAIRDARKAACDTSLAQA--TSNLEPIGRIQMRTRRTLRG 481
R+LI D L E E + + I + ++A + + + R TL G
Sbjct: 823 RLLIFQGQDGVLTAEGEAMDSKIHSVTFSPRGEAIAVGCESGTISVFNLQEARVMYTLAG 882
Query: 482 HLAKIY-AMHWGSDSRNLVSASQDGKLIVWDSHTTN-KVHAIPLRSSWVMTC 631
H K+ M + +D+R +++AS DG L VWD+ T N + + +V+TC
Sbjct: 883 HTNKLRRCMFFNNDTR-ILTASLDGSLKVWDAKTGNLEFTCCHSSTDYVLTC 933
Score = 36.3 bits (80), Expect = 0.033
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYA 640
T + H +Y + SDS +VS D + VWDS + ++ +I V CA++
Sbjct: 505 TAKVHCGAVYCCKFSSDSSKVVSCGTDNHVKVWDSQSGRQLLSISGHGDVVNCCAFS 561
Score = 36.3 bits (80), Expect = 0.033
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLD-DNXILTSSGDMTCA 824
G +A G S+++L+ RV L GH+ L C F + D ILT+S D +
Sbjct: 854 GEAIAVGCESGTISVFNLQE----ARVMYTLAGHTNKLRRCMFFNNDTRILTASLDGSLK 909
Query: 825 LWDXXTGH 848
+WD TG+
Sbjct: 910 VWDAKTGN 917
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/58 (20%), Positives = 27/58 (46%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 643
++ GH + + D ++S S D + +WD+ + V + V +C+++P
Sbjct: 547 SISGHGDVVNCCAFSHDDSRIISCSADQTVKIWDASSGEGVLCFVGHTQEVFSCSFSP 604
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 744 GHSGYLSCCRFL-DDNXILTSSGDMTCALWDXXTG 845
GH+ + C F DD ++ S D T +WD TG
Sbjct: 592 GHTQEVFSCSFSPDDTKAVSCSADRTVKVWDSKTG 626
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXGL 652
L GH + + +S+ L+S S D I+WD V + S V CA+ P GL
Sbjct: 94 LEGHTGAVRVCRFSPNSQFLISGSADETFIIWDVLLKKPVRCVDKLESSVTACAFTPDGL 153
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTS-SGDMTCA 824
G+ +A D+ +++L+T L GH+G + CRF ++ L S S D T
Sbjct: 68 GTLMATASTDSTLMLWNLETG----ECLAVLEGHTGAVRVCRFSPNSQFLISGSADETFI 123
Query: 825 LWD 833
+WD
Sbjct: 124 IWD 126
>SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)
Length = 198
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXGL 652
L GH + + +S+ L+S S D I+WD V + S V CA+ P GL
Sbjct: 94 LEGHTGAVRVCRFSPNSQFLISGSADETFIIWDVLLKKPVRCVDKLESSVTACAFTPDGL 153
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTS-SGDMTCA 824
G+ +A D+ +++L+T L GH+G + CRF ++ L S S D T
Sbjct: 68 GTLMATASTDSTLMLWNLETG----ECLAVLEGHTGAVRVCRFSPNSQFLISGSADETFI 123
Query: 825 LWD 833
+WD
Sbjct: 124 IWD 126
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 476 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXGLL 655
+ H A + ++ + D ++L++AS D L VW H ++++ +WV ++P G L
Sbjct: 25 KAHTATVRSVDFSGDGQSLLTASDDKSLKVWTVHRQKFLYSLNAHMNWVRCAKFSPDGRL 84
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
+L H+ + + D R +VS S D + +WD + + VH +V + + P G
Sbjct: 65 SLNAHMNWVRCAKFSPDGRLIVSGSDDKTIKLWDRTSKDCVHTFYDPGGFVNSVEFHPSG 124
>SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLD-DNXILTSSGDMTCA 824
G ++A +DN I+ L + R L GH+ ++ FL N +LTSS D T +
Sbjct: 257 GDFLASCSMDNTSKIWDLNSE----RCRYTLRGHADSVNSIVFLPYSNTLLTSSADKTLS 312
Query: 825 LWDXXTG 845
LWD TG
Sbjct: 313 LWDARTG 319
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 458 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 592
R R TLRGH + ++ + S L+++S D L +WD+ T + V
Sbjct: 278 RCRYTLRGHADSVNSIVFLPYSNTLLTSSADKTLSLWDARTGDTV 322
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 425 SNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 604
+N++ +++ + TL+GH + I+A+ D +VSAS+D L VW + + +
Sbjct: 442 NNIKVWDLVRLECQATLKGHTSLIWAIAVSRDDSVIVSASKDDLLKVWRTESWVCTQTLI 501
Query: 605 LRSSWVMTCAYAPXG 649
SSW+ A G
Sbjct: 502 GHSSWISCVAMTTDG 516
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCAL 827
G V G D++ ++ K+ ++ E GH G ++ + +++ S D T
Sbjct: 308 GDCVVTGCADHVARSWNAKSG----KMMLEFRGHEGAINAILVTAKDWVISGSDDSTVRA 363
Query: 828 WDXXTGHXCGXFXG 869
WD G C F G
Sbjct: 364 WDLENGESCAVFQG 377
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 458 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 571
R LRGH + A+ +D R+LVS S+D + +WD
Sbjct: 665 RDGMVLRGHDKGVTALLIMNDCRHLVSGSKDSTIRLWD 702
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 738 LPGHSGYLSCCRFL-DDNXILTSSGDMTCALWDXXTGHXC 854
L GH+ L C DD I+TS GD +W+ H C
Sbjct: 210 LHGHTQRLDCVTVTRDDKFIVTSGGDSLINIWN-TENHDC 248
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 574
+ LRGH+ +Y + W D L+S S D I+WD+
Sbjct: 174 KMLRGHIEDVYDLAWSPDGTQLLSGSVDNSAIIWDA 209
>SB_43456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDN-XILTSSGDMTCA 824
G + GG D + ++ L +R V R+ GHSG + +FL DN I+++S D
Sbjct: 93 GQLMIAGGEDGLIQLFDLNSRA----VLRQFKGHSGPVHVTKFLQDNLHIVSASDDKLVN 148
Query: 825 LWDXXT 842
WD T
Sbjct: 149 CWDIAT 154
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 735 ELPGHS-GYLSCCRFLDDNXILTSSGDMTCALWDXXTGHXCGXFXGXPG 878
EL GHS G L+ C +DD I + S D T +WD TG G G
Sbjct: 1176 ELSGHSKGVLTTCFSIDDRKIFSGSEDCTIRVWDSKTGALLAQLDGHAG 1224
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 643
R+L GH ++ ++ + + + LVS + D KL VWD + N + + + + CA+ P
Sbjct: 1258 RSLEGHEDRVTSLAFSKNGKRLVSVALDKKLKVWDVESGNLLDTLTGHDGYPVCCAWNP 1316
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 735 ELPGHSGYLSCCRFLDDNXIL-TSSGDMTCALWD 833
+L GH+G ++C R D ++ +SS D T LW+
Sbjct: 1218 QLDGHAGAVTCVRVSPDGGVIASSSADKTIRLWN 1251
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXGL 652
L GH + + + SD L S S+D + VWD K+ S + AY+ G+
Sbjct: 1454 LGGHSDWVMDVAFSSDGALLTSGSRDRTVRVWDCAAAEKLKKARFHSERCWSVAYSDDGM 1513
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 738 LPGHSGYLSCCRF--LDDNXILTSSGDMTCALWDXXT 842
L GH GY CC + +D+ + T ++ +WD T
Sbjct: 1302 LTGHDGYPVCCAWNPVDNTMVATCGDNLELLIWDLET 1338
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT 580
L GH + + D R + S S+D + VWDS T
Sbjct: 1177 LSGHSKGVLTTCFSIDDRKIFSGSEDCTIRVWDSKT 1212
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSS-WVMT 628
+ GH ++I + + D L SA+ D + VWD + + H S W +T
Sbjct: 1713 MEGHESEIRVVSFSPDDSLLASAALDQTIRVWDLSSYTQHHVFYTASGVWALT 1765
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
TLRGH +Y + D + +S S+D + +WD + +V ++ +S + A P G
Sbjct: 869 TLRGHSETVYCVCCSPDDKFAISGSEDTMVKIWDLESAKEVRSLVGHTSDIFAVAVTPDG 928
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 643
+L GH + + SD R LVSASQD L +W+ T V + S V +P
Sbjct: 827 SLDGHDGHVRGIAITSDGRRLVSASQDRTLRIWNLETFAHVSTLRGHSETVYCVCCSP 884
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 643
RT+ G I + D++ +++ DG + VWD T +++ + + V T A +P
Sbjct: 700 RTIDGRSRTILGIAVTPDTKKIITGGADGSIRVWDYETGKELNKLLDHTKLVYTLALSP 758
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPX 646
R+L GH + I+A+ D ++S+ D ++ VW + ++ ++ S V +P
Sbjct: 910 RSLVGHTSDIFAVAVTPDGSKVISSGDDTQVKVWSLESGEELASLHGHSESVRIVTVSPD 969
Query: 647 GL 652
GL
Sbjct: 970 GL 971
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 428 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 574
NL P R + +L+ H + A+ + + R LVSA+QD I WD+
Sbjct: 1070 NLAPFSR-----KLSLKEHEYPVQALAFAEEGRCLVSAAQDNCFIAWDA 1113
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 643
L H +Y + + LVS + D + +WD T + VH + +WV P
Sbjct: 744 LLDHTKLVYTLALSPHADFLVSGAFDHTVKIWDMDTLSLVHTLKGHKNWVSGVLVTP 800
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
TL+GH + + DS+ ++S+S D + +WD T V+++ V A G
Sbjct: 785 TLKGHKNWVSGVLVTPDSKRIISSSYDKTVKIWDVETCAFVNSLDGHDGHVRGIAITSDG 844
Query: 650 LLRRL 664
RRL
Sbjct: 845 --RRL 847
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 347 QEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSR 526
Q +E+L +RDA + C SL + + L P G + +TL GH +Y + +D
Sbjct: 1017 QLSESLAGLLRDALQP-CVPSLVPSRAFLTPPGG---QLTQTLVGHSKGVYGLAVTADGS 1072
Query: 527 NLVSASQDGKLIVWDSH 577
+VS S+DG + VW ++
Sbjct: 1073 CVVSGSEDGSVKVWSAN 1089
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 732 RELPGHSGYLSCCRFLDDNXILTSSGDMTCALWD 833
RE+ H+ Y+S ++ I+TS GD +WD
Sbjct: 1314 REVLRHANYVSRVLAASNDVIVTSGGDCVIRIWD 1347
>SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06)
Length = 76
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 729 SRELPGHSGYLSCCRFLDDNXILTSSGDMTCALWDXXTGHXCGXFXGXPGD 881
S L GHS CC+F DD ++T GD +W TG G G+
Sbjct: 26 SLTLRGHSEVAYCCQF-DDEKVVTGGGDNLIMVWSAHTGECTATLSGHTGE 75
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT 580
TLRGH Y + D +V+ D ++VW +HT
Sbjct: 28 TLRGHSEVAYCCQF--DDEKVVTGGGDNLIMVWSAHT 62
>SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34)
Length = 292
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 446 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 625
R + R L GH ++ + W D ++L S D KL+VW+ + + ++ V
Sbjct: 133 RSPTQLERRLVGHRQEVCGLKWSPDHQHLASGGNDNKLLVWNLSGSTPIQQYSEHTAAVK 192
Query: 626 TCAYAPXGLLRRLRWT 673
+++P + L W+
Sbjct: 193 AISWSPHQVC-NLAWS 207
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 744 GHSGYLSCCRF-LDDNXILTSSGDMTCALWDXXTGHXCGXFXG 869
GH+ ++ CRF DD I+T+S D T LWD +G+ + G
Sbjct: 37 GHTDSVNSCRFCFDDAKIVTASHDKTIRLWDASSGNQLKVYTG 79
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 672 LDNICSIYSLKT-RXGXVRVSRELPGHSGYLS-CCRFLDDNXILTSSGDMTCALWDXXTG 845
+DN I ++T V+ L GH +S CC D++ + T S D LWD TG
Sbjct: 185 MDNTTKIVDVRTFDTSSNNVTLSLGGHINIVSTCCFSSDEHMLATGSWDKNIQLWDVATG 244
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 631
+ +RGH + + + D +V+AS D + +WD+ + N++ +S + +C
Sbjct: 33 KVMRGHTDSVNSCRFCFDDAKIVTASHDKTIRLWDASSGNQLKVYTGHTSIITSC 87
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 479 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
GH + I + H + SR L+S D LI+WD T + ++ V TC ++ G
Sbjct: 79 GHTSIITSCHPNTTSRKLISGGWDKTLIMWDVETGCALWQ-AVQEGIVTTCHFSSDG 134
>SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20)
Length = 215
Score = 36.3 bits (80), Expect = 0.033
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 747 HSGYLSCCRFLDDNXILTSSGDMTCALWD 833
HS ++C RFLD LT S D T LWD
Sbjct: 111 HSDCVNCVRFLDSRSFLTCSDDKTICLWD 139
>SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 36.3 bits (80), Expect = 0.033
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 738 LPGHSGYLSCCRFLDDNXILTSSGDMTCALWDXXT 842
L GH G +SC RF D+N +++ S D T +WD T
Sbjct: 598 LYGHKGCVSCLRF-DENTLVSGSHDSTIRVWDMRT 631
>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
Length = 453
Score = 35.9 bits (79), Expect = 0.043
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 479 GHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXGL 652
GH+ I+ + +D + L +AS DG + VWD T + VH+ P + ++AP L
Sbjct: 367 GHVETIFDCKFKADDADMLATASFDGTVKVWDVDTLSGVHSSPGNEGIIYALSWAPGDL 425
>SB_42279| Best HMM Match : WD40 (HMM E-Value=2.2e-10)
Length = 291
Score = 35.9 bits (79), Expect = 0.043
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 479 GHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXGL 652
GH+ I+ + +D + L +AS DG + VWD T + VH+ P + ++AP L
Sbjct: 205 GHVETIFDCKFKADDADMLATASFDGTVKVWDVDTLSGVHSSPGNEGIIYALSWAPGDL 263
>SB_50716| Best HMM Match : WD40 (HMM E-Value=0)
Length = 494
Score = 35.1 bits (77), Expect = 0.076
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3
Query: 657 VACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCALWDX 836
+ G DN ++ K+ V+V L GH+G + C ++ D+N I+T S D T +W+
Sbjct: 203 IVSGLRDNTIKVWDKKS-LACVKV---LTGHTGSVLCLQY-DENVIVTGSSDSTVRVWNV 257
Query: 837 XTG 845
G
Sbjct: 258 HAG 260
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCAL 827
G V C D +++ +++ + + R L GH ++ F DD I+++SGD T +
Sbjct: 281 GMMVTCSK-DRSIAVWDMQSPTD-ISLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKV 337
Query: 828 WDXXT 842
W T
Sbjct: 338 WSTST 342
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 571
R L GH + + + D++ +VS + DGK+ VWD
Sbjct: 387 RVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 419
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 464 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 601
RR L GH A + + + D + +VSAS D + VW + T V +
Sbjct: 306 RRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL 349
>SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 648 GSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGD 812
G Y+ACG +D I +I+ L T ++ L GH+ + F D+ +L ++ D
Sbjct: 118 GHYIACGAIDGIINIFDLTTN----KLLHTLEGHAMPIRSLTFSPDSQLLITASD 168
Score = 31.5 bits (68), Expect = 0.93
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 592
TL GH I ++ + DS+ L++AS DG + ++D + + ++
Sbjct: 143 TLEGHAMPIRSLTFSPDSQLLITASDDGHIKMYDVYPSKQL 183
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 497 YAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
+ + + DS+ L + S GK+ + + K ++ R + M+ AY+P G
Sbjct: 68 WTVTFSPDSKILATGSHSGKVNLINLELGKKESSLDTRGKFTMSLAYSPDG 118
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 571
TL GH +++++ W +D + L + S+D KL ++D
Sbjct: 148 TLEGHNEQVFSLAWSADGKQLATFSRDKKLRIYD 181
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 458 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 595
+T + RGH + + + + +D+ +++SAS DG + +W+ +T H
Sbjct: 340 KTLKEFRGHTSFVNDVIFTADAHHIISASSDGTIKIWNIKSTECQH 385
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPX 646
+ L H +Y + + D R L S S D ++ +W + T N VH+ S + ++P
Sbjct: 327 QVLSKHHEPVYTISFSPDGRYLASGSFDKRVHIWSTQTGNLVHSFQ-GSGGIFEVQWSPR 385
Query: 647 G 649
G
Sbjct: 386 G 386
Score = 26.2 bits (55), Expect(2) = 7.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQD 550
++ RGH++++ A+ W L S S D
Sbjct: 264 KSFRGHMSEVNAIRWDPSGTLLASCSDD 291
Score = 20.6 bits (41), Expect(2) = 7.6
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +2
Query: 536 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
SAS D + +WD + + V T +++P G
Sbjct: 308 SASYDTTVRLWDVERGGCLQVLSKHHEPVYTISFSPDG 345
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1
Query: 346 PGGGNP*KRY*RCEKSGMRHVAGPGHLEPGADRSHTDAHPTNLARSS 486
PGGG P R +RHV P HL G +S+TD + NL+ S
Sbjct: 1289 PGGGRPSPRPSSPRTGHVRHVTSPRHLS-GVSKSNTDYNLHNLSTGS 1334
>SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22)
Length = 874
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXG 649
L+GH K+ + W D ++S DG + W+ + + L+S + +P G
Sbjct: 270 LKGHNGKVRQVIWSQDDSKIISCGMDGAVYEWNVYNYKREGESVLKSCSYTSVTVSPDG 328
>SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11)
Length = 256
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 571
R++RGH I+ M + D L S DG + VWD
Sbjct: 175 RSVRGHTDTIHTMSFSPDGTLLASGGMDGAVRVWD 209
>SB_38341| Best HMM Match : TFIID_90kDa (HMM E-Value=4.6e-19)
Length = 426
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQD 550
TLRGH +YA +GS+ + L+SAS+D
Sbjct: 345 TLRGHSGPVYATCFGSEGKILLSASED 371
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 601
TL GH + + M + +VS S+DG L VWD+ T N +H +
Sbjct: 394 TLYGHTSTVRCMDMHEEV--VVSGSRDGTLRVWDTTTGNCLHVL 435
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 708 RXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCALWDXXTGHXCGXFXGXPG 878
R G +R S+ L GH ++ C + +++ S D T +W +G G G
Sbjct: 304 RRGPLRPSKILKGHDDHVITCLQFSGSRVVSGSDDGTLKVWSALSGKCLRTLTGHTG 360
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 645 SGSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCA 824
SGS V G D ++S + + R L GH+G + + L + I++ S D T
Sbjct: 328 SGSRVVSGSDDGTLKVWSALSG----KCLRTLTGHTGGVWSSQ-LSGHIIVSGSTDRTLK 382
Query: 825 LWDXXTGH 848
+W+ TG+
Sbjct: 383 VWNAETGY 390
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 747 HSGYLSCCRFLDDNXILTSSGDMTCALWDXXTG 845
H ++C +F ++TSS D T +WD TG
Sbjct: 561 HQSAVTCLQF-SSKFVITSSDDGTVKIWDLQTG 592
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGK--LIVWDSHTTN 586
+TLRGH A + + W LVS S+D + + +WD+ T N
Sbjct: 149 KTLRGHGADVKCIDWHPHKSLLVSGSKDSQQPIKLWDTRTGN 190
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 571
L GH A + ++ + + R+L+S+ D +L+VWD
Sbjct: 265 LSGHKAAVQSLAFSRNGRHLISSGVDTRLLVWD 297
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 428 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 607
N P + R L GH ++A+ D++ L+S S+D + +W T + A
Sbjct: 64 NRIPFPEMTASESRRLVGHSGPVFAVSIDHDNKFLLSCSEDKTIRLWSLFTFTTLVAYRG 123
Query: 608 RSSWVMTCAYAPXG 649
+ V + P G
Sbjct: 124 HNYPVWDVQFCPRG 137
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 32.7 bits (71), Expect = 0.40
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +2
Query: 419 ATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA 598
+T + + Q R + L + YA+ DS+ S DG + VWD H V
Sbjct: 405 STLTIWDLASSQPRIKAELTSNAPACYALAMSPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 464
Query: 599 IPLRSSWVMTCAYAPXGLLRRLRWTG 676
+ +P G +L WTG
Sbjct: 465 FQGHTDGASCIDISPDG--TKL-WTG 487
>SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 243
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 732 RELPGHSGYLSCCRFLDDNXILTSSGDMTCALWD 833
R GH+ +SC +F DD I++ S D T +WD
Sbjct: 20 RTFEGHTQGISCVQF-DDTRIVSGSSDKTIKVWD 52
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 732 RELPGHSGYLSCCRFLDDNXILTSSGDMTCALWD 833
R GH+ +SC +F DD I++ S D T +WD
Sbjct: 647 RTFEGHTQGISCVQF-DDTRIVSGSSDKTIKVWD 679
>SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)
Length = 675
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 597 RSRCARXXXXXXXXXXSGSYVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRF 776
+ RCA+ G +A DN +Y+L+ + + + GH+ Y++ +
Sbjct: 427 KKRCAQEKISDLKYSPDGKCLAVASHDNNIYVYTLENGGKSMELCGKCEGHTSYVTHFDW 486
Query: 777 -LDDNXILTSSGDMTCALWD 833
+ + I ++SGD WD
Sbjct: 487 SVGSDFIQSTSGDYELLFWD 506
>SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)
Length = 383
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +2
Query: 467 RTLRGHLAKIY--AMHWGSDSRN--LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCA 634
RTL GH + A WG + L +AS+DG +I+W + + + + V C
Sbjct: 87 RTLVGHEKPVTNCAFMWGPSLKTPILATASEDGDVILWHYDSGKRAARLAVHCKAVTDCV 146
Query: 635 YAPXG 649
+A G
Sbjct: 147 FAKDG 151
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC-AYAP 643
RTLRGH + + + D+R + S S D + +W ++ + + + C +AP
Sbjct: 182 RTLRGHQGAVNVVAFSLDNRYIFSGSDDKSIRIWSRESSKCENTLTDSLGGEVRCLRFAP 241
Query: 644 XG 649
G
Sbjct: 242 HG 243
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 637
TL GH I + G D + L + S D + +W+ T + + V CA+
Sbjct: 46 TLEGHKKAILNVEVGPDGKTLATCSADCTVGLWNITTGELLRTLVGHEKPVTNCAF 101
>SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28)
Length = 539
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 440 IGRIQM-RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 571
I I+M R RT GH +I + + D R L+S+S D + WD
Sbjct: 437 IADIEMHRIVRTFTGHANRITDVSFSPDGRWLISSSMDSTIRTWD 481
>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
Length = 736
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTTNKV 592
R L GH ++ A+ W + LV++S DG VWD T +
Sbjct: 16 RQLVGHCGRVTALSWSPHHPDRLVTSSYDGSAQVWDVETNQPI 58
>SB_56394| Best HMM Match : WD40 (HMM E-Value=6.2e-10)
Length = 183
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 726 VSRELPGHSGYLSCCRFLDDNXILTSSG-DMTCALWDXXTG 845
+ +L GH ++CCRF ++ S G D +W G
Sbjct: 32 IRHQLSGHIADVNCCRFFPSGEVIASGGADFQIKIWSAIDG 72
>SB_52292| Best HMM Match : WD40 (HMM E-Value=1.6e-09)
Length = 743
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 482 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 607
H A I + W S LV+ +DG ++ W + ++ PL
Sbjct: 82 HKAAIKTIEWNSSGNKLVTGDEDGTVVGWKADQKGRLQQNPL 123
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 31.5 bits (68), Expect = 0.93
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 500 AMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 601
A +G + + +V+ S DG +WD +TTN + +
Sbjct: 654 ANFFGDNGQYIVAGSDDGSFFMWDRNTTNLIRVL 687
>SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 476 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 595
+GH +I A+ +D + L S +D + +WD T+ +H
Sbjct: 111 KGHKEQILALAITTDGKYLASGGKDKLIRIWDPDTSKHIH 150
>SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2032
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 657 VACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRF-LDDNXILTSSGDMTCALW 830
+ G DN ++S+K + + + HS ++C D + ++T S D TC LW
Sbjct: 1790 ITAGHWDNTIRVFSIKGK-----LQSRITAHSDTVTCLSIDRDGHHLMTGSRDTTCRLW 1843
>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSD-SRNLVSASQDGKLIVWD 571
L+GH + Y + W + + NL+SAS D + +WD
Sbjct: 239 LKGHTKEGYGLSWNPNVNGNLLSASDDHTICLWD 272
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDS 574
RTL+GH + + ++L +SAS+DG +++WD+
Sbjct: 123 RTLKGHSDFVLGVDCSGTEKDLFLSASRDGSVVLWDT 159
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT-NKVHAI 601
+L GH + + + + S +V+ SQ G L +WD K+HA+
Sbjct: 56 SLAGHTSPVECVQFNSGEDLVVAGSQSGTLKIWDLEAAKRKLHAL 100
>SB_38974| Best HMM Match : WD40 (HMM E-Value=1.1e-19)
Length = 584
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/57 (19%), Positives = 24/57 (42%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 643
++ + + + W D + +V+ +D + VW H + SW+ A+ P
Sbjct: 312 MKSYFGGLTCVCWSPDGKYVVTGGEDDLITVWSFHELRVIARGQGHQSWISVVAFDP 368
>SB_35708| Best HMM Match : WD40 (HMM E-Value=1.2)
Length = 179
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 568
+TL GH + + W + L ++ Q G +IVW
Sbjct: 107 QTLEGHTGAVQVVTWNEQFQKLTTSDQYGLIIVW 140
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 431 LEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 604
+ PI R Q + GH +++ +HW + + GK I H +VH IP
Sbjct: 863 VHPIHRAQRASSSHPTGHKGQVHPIHWAQRASSSHPPGTKGKFIPSTGH-KGQVHPIP 919
>SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14)
Length = 316
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +3
Query: 654 YVACGGLDNICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCALWD 833
+++ G D+ Y L+ + V + GH +S +F++ I+++S D LW+
Sbjct: 117 HLSFGSADHCVHYYDLRHAAKPINVFK---GHRKAVSYTKFINSTEIVSASTDSQLKLWN 173
Query: 834 XXTGHXCGXFXG 869
H F G
Sbjct: 174 INKPHCLRTFKG 185
>SB_19792| Best HMM Match : SspH (HMM E-Value=6.6)
Length = 244
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 311 RVLIMNELDSLRQEAETLKNAIRDARKAACDTSLAQA--TSNLEPIGRIQMRTRRTLRGH 484
R+ I + DS Q A T N + D++KA T A T+++ ++ T+
Sbjct: 14 RIYIQHVSDS--QTARTYTNHMNDSQKARIYTQHAARIYTNHVNDSQTARIYTQHVNYSQ 71
Query: 485 LAKIYAMHWGSDSRNLVSASQDGKL 559
A+IY H NLV+ SQ ++
Sbjct: 72 TARIYTQHAARIYTNLVNDSQTARI 96
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 452 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 574
Q R TLR H + + W D L S S D + +W++
Sbjct: 77 QWRCVHTLRQHSGDVLDLAWSPDDSFLASGSVDNTVTIWNA 117
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH 577
TL H ++ + W D + L S D L +WD++
Sbjct: 286 TLDKHTQEVCGLKWSPDGKYLASGGNDNLLNIWDAN 321
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 586
L GH ++ M D + +VSA+ D L +W TT+
Sbjct: 423 LTGHSCRVLHMAMSPDGQTVVSAAADETLRLWKCFTTD 460
>SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18)
Length = 1051
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 379 RCEKSGMRHVAGPGHLEPGA 438
RCE SG H A P H PGA
Sbjct: 489 RCELSGATHFAFPAHFTPGA 508
>SB_9467| Best HMM Match : PAN (HMM E-Value=3e-05)
Length = 168
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 379 RCEKSGMRHVAGPGHLEPGA 438
RCE SG H A P H PGA
Sbjct: 70 RCELSGATHFAFPAHFTPGA 89
>SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)
Length = 426
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 645 SGSYVACGGLDNICSIYSLKTRXGXVRVSREL--PGHSGYLSCCRFLDDNX-ILTSSGDM 815
SG + G D +Y K + HSG + + DD+ ILT+SGD
Sbjct: 168 SGDFFIAGSADGKLCLYDGKEGNLVAEIVDPALKKAHSGGIYGLSWSDDSKFILTASGDK 227
Query: 816 TCALWD 833
+C +W+
Sbjct: 228 SCKIWN 233
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 476 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 571
+ H IY + W DS+ +++AS D +W+
Sbjct: 202 KAHSGGIYGLSWSDDSKFILTASGDKSCKIWN 233
>SB_35567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 239 RCVACCTCAARGCRSSVPRELCV 307
RC A C C GCR + RE V
Sbjct: 42 RCTAPCVCTQEGCRKTFVREAAV 64
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRN--LVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCAYA 640
TL GH ++ + + L S + DG L +WD + + V + + V +CA++
Sbjct: 38 TLAGHTTGVWTCAFNPERTGDILCSGADDGSLKLWDIRSNSVVMSLVGGHDDRVKSCAWS 97
Query: 641 PXG 649
P G
Sbjct: 98 PNG 100
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 509 WGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 643
+ +D + L SAS D +I+ D T V+ + ++ V TCA+ P
Sbjct: 9 FNNDGKLLASASWDKFVIISDVPTGKPVNTLAGHTTGVWTCAFNP 53
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPXGL 652
L+GH + I +++ D + S S D + +WD + + AI S V + P G
Sbjct: 1143 LKGHSSHIMSVYAAKDDI-IASGSNDNTVRLWDLRSQRCIDAIATGDSCVSSVCVNPSGT 1201
Query: 653 L 655
L
Sbjct: 1202 L 1202
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 735 ELPGHSGYLSCCRFLDDNXILTSSGDMTCALWD 833
+L GHS ++ D+ I + S D T LWD
Sbjct: 1142 QLKGHSSHIMSVYAAKDDIIASGSNDNTVRLWD 1174
>SB_50270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 857
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 631
L GH I A+ G+++ NL SAS D + VW + +H + +S C
Sbjct: 207 LSGHEGSIRAL--GANTANLFSASADCTIRVWKRDSFELMHTLEQKSPISSLC 257
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 678 NICSIYSLKTRXGXVRVSRELPGHSGYLSCCRFLDDNXILTSSGDMTCALWDXXT 842
N ++ L+TR + + GH+GY+ L ++ + T S D +WD T
Sbjct: 151 NAVKVFDLETR-----MFSNMHGHTGYVLSIIALGNHQVATGSMDKQVMIWDAAT 200
>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
Length = 273
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 452 QMRTRRTLRGHLAKIYAMHWG-SDSRNLVSASQDGKLIVWD 571
Q+ R TL+GH + + S+ ++S+S+D KLIVW+
Sbjct: 41 QLSLRGTLKGHNGWVTQIATNPSNPDTILSSSRDKKLIVWE 81
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 461 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 574
T R GH + ++ + +D+R +VS ++D + +W++
Sbjct: 134 TTRRFVGHTKDVLSVAFSADNRQIVSGARDHHIKLWNT 171
>SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1020
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -1
Query: 279 RQPRAAHVQHATHRSFCQQCPFDRRSSDFRAISISPL--RLDNHFLAHF-VSFQYHHTKT 109
+Q R H Q A +S PF+ S DF + S + +L N ++ F + HH +
Sbjct: 572 KQKRPKHAQRAPMQSIQTTAPFELISLDFLHLEKSSVAEKLYNDYIMRFGFPLRIHHDQG 631
Query: 108 RIFHKFLSRNNPPLAFHTPSRS 43
+ F L ++ L+ SR+
Sbjct: 632 KEFENDLHKHLEKLSGVAHSRT 653
>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
Length = 123
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 452 QMRTRRTLRGHLAKIYAMHWG-SDSRNLVSASQDGKLIVWD 571
Q+ R TL+GH + + S+ ++S+S+D KLIVW+
Sbjct: 4 QLSLRGTLKGHNGWVTQIATNPSNPDTILSSSRDKKLIVWE 44
>SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07)
Length = 242
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 488 AKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWV 622
+K+ A WG + LV+ ++G+L WD + NK+ ++ S +
Sbjct: 13 SKVTAGLWGPLDQFLVTGHENGELCQWDVKSGNKLISVQEHSKQI 57
>SB_8327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 464 RRTLRGHLAKIYAMHWGSDSR-NLVSASQDGKLIVWD 571
+ TL+GH +++ + + + ++S S DG++I+WD
Sbjct: 55 QHTLKGHTSQVVGISADTTNELQVISCSGDGQVIMWD 91
>SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10)
Length = 193
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 509 WGSDSRNLVSASQDGKLIVWDSHTTN 586
W + RN+++ S DG + +WD N
Sbjct: 47 WNKEDRNVLATSHDGDVRIWDLRKGN 72
>SB_1661| Best HMM Match : WD40 (HMM E-Value=5e-13)
Length = 106
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 470 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT 580
TL GH A+I + + S L++ S D + VWD+ +
Sbjct: 18 TLSGHSAEIISCAFNSTGTQLLTGSFDHTVSVWDTRS 54
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 738 LPGHSGYLSCCRFLDDNX-ILTSSGDMTCALWDXXTG 845
L GHS + C F +LT S D T ++WD +G
Sbjct: 19 LSGHSAEIISCAFNSTGTQLLTGSFDHTVSVWDTRSG 55
>SB_39595| Best HMM Match : WD40 (HMM E-Value=1.10001e-40)
Length = 260
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 536 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 631
S +D L VW ++ +V +P S W +TC
Sbjct: 218 SVGEDRTLRVWKGDSSPQVITLPATSIWAVTC 249
>SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30)
Length = 351
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 379 RCEKSGMRHVAGPGHLEPGA 438
+C+ +G H A PGHL PGA
Sbjct: 97 QCQLNGDTHFAFPGHLIPGA 116
>SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08)
Length = 175
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 473 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 568
L GH A + + W D L S +G +IVW
Sbjct: 136 LLGHSAPVLDVCWNYDESLLASCDTEGTVIVW 167
>SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 732 RELPGHSGYLSCCRFLDDNXILTSSGDMTCALWDXXTGH 848
+ L GH+ ++C DN +++ + + WD TG+
Sbjct: 480 QNLSGHNTIINCLAVNSDNVLVSGGDNGSMYFWDWKTGY 518
>SB_46201| Best HMM Match : WD40 (HMM E-Value=0)
Length = 292
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 467 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 592
++L H I AM SD + +V+ S+D +WD+ T + +
Sbjct: 26 KSLEHHEGGINAMCISSDGKTIVTGSEDKTGRLWDTRTEDTI 67
>SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 408 DVSHAAFLASLIAFLRVSASWRRLSSSFMINTRVTHSSRGTD--DRQPRAAHVQHATH 241
D +HA F + + + VSAS + + I+ R+ TD RQP A Q + H
Sbjct: 143 DATHAYFASVELGSVDVSASRNKSMINVTISNRLVKVKADTDLIQRQPTAPDAQDSKH 200
>SB_3333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 494 IYAMHWGSDSRNLVSASQDGKLIVW 568
+ +M W +DS N+++A QDG+ VW
Sbjct: 2 VTSMAW-NDSTNMLAALQDGRFTVW 25
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,804,471
Number of Sequences: 59808
Number of extensions: 545863
Number of successful extensions: 3603
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 3185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3595
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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