BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O10
(885 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative transcri... 28 0.43
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 26 1.8
EF426186-1|ABO26429.1| 133|Anopheles gambiae unknown protein. 25 3.1
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 4.1
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 24 5.4
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 7.1
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 23 9.4
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 23 9.4
AJ000502-1|CAA04136.1| 299|Anopheles gambiae iron regulatory pr... 23 9.4
>AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative
transcription factor protein.
Length = 319
Score = 27.9 bits (59), Expect = 0.43
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 402 NILLLSTAPERGTRVDTAHKRRRQCALPDSGCAIPGNSGCAIPDNS 539
N L T+P T H +++Q D GC+ G++G +P ++
Sbjct: 4 NERLNGTSPTTKKESSTDHHQQQQQQHEDMGCSSAGSTGTTLPTDA 49
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 25.8 bits (54), Expect = 1.8
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Frame = +2
Query: 581 DNSGVYHTQLL--RVCHTRXAQSAPYPVAQNAPYPTTQGAPYPTTHGAP----YPVHHG- 739
DN Y+ + + + H A +A Y + AP P T G P P P P G
Sbjct: 32 DNVKFYYQKWMEEQAQHLIDATTAAYKAGKIAPNPFTAGPPKPNISIPPPTMNMPPRPGM 91
Query: 740 VGGYSMAPPL 769
+ G APPL
Sbjct: 92 IPGMPGAPPL 101
>EF426186-1|ABO26429.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 516 GCAIPDNSGVLHTRQLRGAPYPT-TQGSTIPSCSECAIPGLLRVRHI 653
G +I + GVL T GA YPT T P C + RV HI
Sbjct: 39 GHSIGTSLGVLRTFYQLGARYPTLTHTCNTPWADCCKVDEPGRVPHI 85
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PYPTQGVPYPATQGAPYPTT 537
P P Q P PAT AP TT
Sbjct: 938 PNPVQASPSPATAPAPAKTT 957
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 24.2 bits (50), Expect = 5.4
Identities = 9/36 (25%), Positives = 15/36 (41%)
Frame = -1
Query: 534 CRVWRTLSCRVWHTLSRVRRIDDDVCGRYQHACLSP 427
CRVWR + H L + + + C++P
Sbjct: 103 CRVWRWPDLQSHHELKPIETCQYPFSAKQKEVCINP 138
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.8 bits (49), Expect = 7.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 762 PPCRPECGEPAPRHRTSQPXPXXXAGGTQ 848
P G P P HR QP A TQ
Sbjct: 910 PGAAAATGPPPPTHRLEQPPQVVAAAPTQ 938
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 23.4 bits (48), Expect = 9.4
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Frame = +2
Query: 542 GAPYPTTQGCAIPDNSGVYHTQL--LRVCHTRXAQSAPYPVAQNA---PYPTTQGAPYPT 706
G P P A+P VY Q L+V + + Y V P P T PYP
Sbjct: 175 GVPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPI 234
Query: 707 THGAPYPV 730
P+PV
Sbjct: 235 EVEKPFPV 242
Score = 23.4 bits (48), Expect = 9.4
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +2
Query: 647 PYPVAQNAPYPTTQGAPYPTTHGAPYPV 730
PYP+ P+P + PYPV
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 23.4 bits (48), Expect = 9.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 635 AQSAPYPVA--QNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQT*MW 784
A SA +A +++P PT PYP +G ++ + +S+ P + +W
Sbjct: 42 ATSAELEIAWRESSP-PTLVAGPYPEPNGTAESMYQTMDFFSILPLWRLIVW 92
>AJ000502-1|CAA04136.1| 299|Anopheles gambiae iron regulatory
protein protein.
Length = 299
Score = 23.4 bits (48), Expect = 9.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 586 VVGYG-APLSCRVWSTPELSGMAHPELPGMAHPESGKAH*R 467
+VG G PL E G+ EL +A PES K H R
Sbjct: 218 LVGMGIVPLQYLAGQNAESLGLTGQELFSIAIPESCKPHER 258
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 902,859
Number of Sequences: 2352
Number of extensions: 19698
Number of successful extensions: 37
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -