Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O10
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 38 0.013
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.029
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 33 0.36
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 31 0.83
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 31 0.83
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 30 1.9
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 30 1.9
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 30 1.9
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 30 1.9
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 30 2.5
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 30 2.5
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 4.4
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 4.4
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 7.7
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +2
Query: 638 QSAPYPVAQNAP-YPTTQ----GAPYPTTHGAPYPVHHGVGGYSMAPPLQT*MWRTSTXA 802
Q PYP P YP + G YP GAPYP G GGY AP + S
Sbjct: 38 QQQPYPGGGGQPPYPGSNSNQGGGGYPGQGGAPYP--GGSGGYPQAPQYGFSGGQGSAPQ 95
Query: 803 PNLAAXPP 826
PN PP
Sbjct: 96 PNQGGYPP 103
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +2
Query: 638 QSAPYPVAQNAP-YPTTQ----GAPYPTTHGAPYPVHHGVGGYSMAPPLQT*MWRTSTXA 802
Q PYP P YP + G YP GAPYP G GGY AP + S
Sbjct: 80 QQQPYPGGGGQPPYPGSNSNQGGGGYPGQGGAPYP--GGSGGYPQAPQYGFSGGQGSAPQ 137
Query: 803 PNLAAXPP 826
PN PP
Sbjct: 138 PNQGGYPP 145
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 475 APYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYP 630
APYP Q VP PA APYP ++P + + +P P PYP
Sbjct: 55 APYPQQAVPAPAPPPAPYPQH---AVPAPAPPLASYPQNAVPVPAPPPAPYP 103
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 475 APYPTQGVPYPATQGAPYP 531
APYP VP PA APYP
Sbjct: 100 APYPQHAVPAPAPPPAPYP 118
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/78 (34%), Positives = 33/78 (42%)
Frame = +2
Query: 638 QSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQT*MWRTSTXAPNLAA 817
Q+AP P APYP Q P P APYP H V + APPL + A + A
Sbjct: 47 QTAPPPPP--APYPQ-QAVPAPAPPPAPYP-QHAVP--APAPPLAS----YPQNAVPVPA 96
Query: 818 XPPXXSRRYTTXQPGSTP 871
PP ++ P P
Sbjct: 97 PPPAPYPQHAVPAPAPPP 114
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 33.9 bits (74), Expect = 0.16
Identities = 32/125 (25%), Positives = 41/125 (32%)
Frame = +1
Query: 451 PPTNVVVNAPYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYP 630
PP P T+ P P T+ P PTT+ P + T P PV P P
Sbjct: 176 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNP 235
Query: 631 XCSECAISGCSECAIPNNAGCTIPDNARCALPSPSWCRRILDGSPPADLNVANQHXGTEP 810
E + E P A P +PSP PPA+ V + P
Sbjct: 236 PAPENTTAKV-ETTKPTKAAPPAPTPVPNPVPSPP--------PPPANTTVTEEKTTVPP 286
Query: 811 RSRAP 825
+ P
Sbjct: 287 ATDEP 291
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 638 QSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQT*MWRTSTXAP 805
++ P P + P PTT+ P PTT P P + APP T +T AP
Sbjct: 173 EAPPPPTTKAPPPPTTKAPPPPTTKAPPPPT-------TKAPPPPTTNKEVTTVAP 221
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 644 APYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYS 754
AP P + AP P + AP P AP GGYS
Sbjct: 194 APEPAPEAAPAPAPEAAPVPAQDAAPAAPAADAGGYS 230
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +2
Query: 644 APYPVAQNAPYPTT----QGAPYPTTHGAPYPVHHGVGGYS 754
AP P A AP PT + AP P AP G GGYS
Sbjct: 113 APAPEAAPAPEPTPAPAPEAAPAPAPDAAPTAPAAGAGGYS 153
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 647 PYPVAQNAPYPTTQGA-PYPTTHGAPYPVHHGVGGYSMAPPL 769
P P +A P Q P P H P P H G+ APP+
Sbjct: 361 PNPPVNHAIAPVAQHPQPMPIPHQVPSPAHGAAHGHPQAPPM 402
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 635 AQSAPYPVAQNAPYPTTQGAPYPTTHGAPYP 727
A ++ P A NAP PT Q P P AP P
Sbjct: 80 APASAAPAAPNAPTPTAQQQPSPKASAAPIP 110
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 469 VNAPYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQ-LRGLPYPVAQSVPYP 630
+ APY Q PY + APY + P N V T+Q L+ + + A P P
Sbjct: 245 LRAPYALQSAPYASAASAPYGSVTPAGAPSN--VMTTQQYLQQIQHQQATGSPAP 297
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Frame = +2
Query: 647 PYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVG----GY-SMAPPLQT*MWRTSTXAPNL 811
P PV Y PY T+ P P+ G G GY APPL T + P
Sbjct: 41 PPPVGAGVGYAPPPPRPYGATYAPPPPMGIGAGVNPSGYVQQAPPLPTQGYSAYNQQP-- 98
Query: 812 AAXPPXXSRRYTTXQPGSTP 871
PP + Y T S P
Sbjct: 99 ---PPLPQQPYQTNMYPSNP 115
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 469 VNAPYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQ-LRGLPYPVAQSVPYP 630
+ APY Q PY + APY + P N V T+Q L+ + + A P P
Sbjct: 245 LRAPYALQSAPYASAASAPYGSVTPAGAPSN--VMTTQQYLQQIQHQQATGSPAP 297
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 742 RRILDGSPPADLNVANQHXGTEPRSRA 822
+RI++ SPP +L NQH GT+ + A
Sbjct: 63 QRIVEDSPPVELQSENQHLGTDMENPA 89
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +2
Query: 647 PYPVAQNA---PYPTTQG-APYPTTHGAPYPVHHGVGGYS 754
PYP +Q PYPT G APYP + PYP G GY+
Sbjct: 170 PYPSSQPTMPTPYPTGSGAAPYPPS-STPYP-SAGAMGYN 207
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 650 YPVAQNAPYPTTQGAPYPTTHGAPYP-VHHGVGGYSMAPPL 769
+P Q+AP PT Q P T+H P P + +G ++AP L
Sbjct: 166 HPAQQSAP-PTQQSRPQTTSHKPPNPEMEFDIGVKNIAPVL 205
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 650 YPVAQNAPYPTTQGAPYPTTHGAPYP-VHHGVGGYSMAPPL 769
+P Q+AP PT Q P T+H P P + +G ++AP L
Sbjct: 166 HPAQQSAP-PTQQSRPQTTSHKPPNPEMEFDIGVKNIAPVL 205
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 638 QSAPYPVAQNAPYPTTQGAPYPTTHGAPYP 727
Q AP PV QN P P Q A P AP P
Sbjct: 332 QQAP-PVQQNPPKPAVQQAQAPVVQQAPAP 360
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 647 PYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMA 760
P P A AP P + AP P P P GGY+ A
Sbjct: 40 PPPPADAAPAPAPEPAPAPAPEAVPAPA-ADAGGYAAA 76
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 635 AQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMA 760
A S PY ++P PT G +P T GAP P Y A
Sbjct: 407 ASSLPYSKVVHSPRPTLFG--FPFTGGAPKPSRQAFAAYMEA 446
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 578 PDNSGVYHTQLL-RVCHTRXAQSAPYPVA-QNAPYPTTQGAPYPTTHGAPYP 727
P+ HT +L R H P+A + P P TQG P P + P
Sbjct: 423 PNQQSQQHTPVLPRSLHNEMTSHGMRPIALPSQPLPQTQGTPQPILSASSLP 474
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 578 PDNSGVYHTQLL-RVCHTRXAQSAPYPVA-QNAPYPTTQGAPYPTTHGAPYP 727
P+ HT +L R H P+A + P P TQG P P + P
Sbjct: 421 PNQQSQQHTPVLPRSLHNEMTSHGMRPIALPSQPLPQTQGTPQPILSASSLP 472
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 572 AIPDNSGVYHTQLLRVCHT-RXAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYP 727
A P G Y + RV ++AP A+ AP P AP P AP P
Sbjct: 451 AAPAGGGSYPAKKRRVARDYAEGEAAPAAPAEPAPAPAPAPAPAPEAAPAPEP 503
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +2
Query: 653 PVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPL-QT*MWRTSTXAPNLAAXPPX 829
P + AP P G P G P GG M PPL T + S AP + A P
Sbjct: 774 PGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIPARPQV 833
Query: 830 XSRRY 844
R +
Sbjct: 834 PKRPF 838
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +2
Query: 653 PVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPL-QT*MWRTSTXAPNLAAXPPX 829
P + AP P G P G P GG M PPL T + S AP + A P
Sbjct: 774 PGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIPARPQV 833
Query: 830 XSRRY 844
R +
Sbjct: 834 PKRPF 838
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,560,440
Number of Sequences: 27780
Number of extensions: 448134
Number of successful extensions: 1630
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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