Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O10
(885 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g51300.2 68418.m06360 splicing factor-related contains simila... 33 0.25
At5g51300.1 68418.m06359 splicing factor-related contains simila... 33 0.25
At2g28240.1 68415.m03428 hydroxyproline-rich glycoprotein family... 31 0.77
At1g07730.2 68414.m00834 disease resistance-responsive family pr... 31 1.0
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.8
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.8
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 30 2.3
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 30 2.3
At2g16050.1 68415.m01840 DC1 domain-containing protein contains ... 30 2.3
At1g26150.1 68414.m03192 protein kinase family protein similar t... 30 2.3
At5g55520.1 68418.m06915 expressed protein weak similarity to ph... 29 3.1
At5g37010.1 68418.m04438 expressed protein 29 3.1
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 29 4.1
At4g15070.1 68417.m02315 DC1 domain-containing protein contains ... 29 4.1
At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family... 29 4.1
At1g66440.1 68414.m07548 DC1 domain-containing protein contains ... 29 4.1
At1g67870.1 68414.m07750 glycine-rich protein contains non-conse... 29 5.4
At4g02540.1 68417.m00347 DC1 domain-containing protein contains ... 28 7.2
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 28 7.2
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 7.2
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 7.2
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 28 7.2
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 7.2
At2g36270.1 68415.m04452 bZIP transcription factor family protei... 28 7.2
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 28 7.2
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 28 7.2
At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp... 28 7.2
At5g49580.1 68418.m06136 DNAJ heat shock N-terminal domain-conta... 28 9.5
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ... 28 9.5
At3g02100.1 68416.m00176 UDP-glucoronosyl/UDP-glucosyl transfera... 28 9.5
At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family... 28 9.5
>At5g51300.2 68418.m06360 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 614 RVCHTRXAQSAPYPVAQN---APYPTTQGAPYPTTHGAPYP-VHHGVGGYSMAP 763
R R A +P P+A AP P TQG P YP + GGYS AP
Sbjct: 549 RTLAVRIAGKSPPPIAPPGPPAPQPPTQGYPPSNQPPGAYPSQQYATGGYSTAP 602
>At5g51300.1 68418.m06359 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 614 RVCHTRXAQSAPYPVAQN---APYPTTQGAPYPTTHGAPYP-VHHGVGGYSMAP 763
R R A +P P+A AP P TQG P YP + GGYS AP
Sbjct: 549 RTLAVRIAGKSPPPIAPPGPPAPQPPTQGYPPSNQPPGAYPSQQYATGGYSTAP 602
>At2g28240.1 68415.m03428 hydroxyproline-rich glycoprotein family
protein
Length = 660
Score = 31.5 bits (68), Expect = 0.77
Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
Frame = +2
Query: 503 TRQLRVRHT-RQLRGAPYPTTQGCAIPDNSGVYHTQLLRVCHTRXA---QSAPYPVAQNA 670
T + R H R P P +Q A N+ + T R T A QS P Q
Sbjct: 527 TTEARPLHQPRSKTPQPKPVSQPPAKQSNTEINSTPHPRPSVTSKAISLQSPPCNTPQPR 586
Query: 671 PYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQT*MWRTSTXAPNLAAXPPXXSR 838
P P + A P HG+ +MAP L+ S+ APN AA P R
Sbjct: 587 PPPLISNHTPTSYQPASAPPVHGIARRTMAPHLR------SSRAPNSAAAPSTYPR 636
>At1g07730.2 68414.m00834 disease resistance-responsive family
protein contains Pfam PF03018: Plant disease resistance
response protein
Length = 389
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 472 NAPYPTQGVPYPATQ-GAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYPXCSECA 648
+ P PT G AT GA + G S+PDN+ V + G P A++V + A
Sbjct: 130 SGPLPTVGSGAAATGLGAGAGSVIGGSVPDNTLVFFMHDILGGSNPTARAVT-GVVANAA 188
Query: 649 ISGCSECAIPNNAGCTI 699
+SG A PN A +
Sbjct: 189 LSGQIPFAKPNGANLPV 205
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 623 HTRXAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQT 775
HT + P +P+T +P+T P P H GGY +PP +T
Sbjct: 96 HTPTPHTPPCNCGSPPSHPSTPS--HPSTPSHPTPSHPPSGGYYSSPPPRT 144
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 623 HTRXAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQT 775
HT + P +P+T +P+T P P H GGY +PP +T
Sbjct: 96 HTPTPHTPPCNCGSPPSHPSTPS--HPSTPSHPTPSHPPSGGYYSSPPPRT 144
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 451 PPTNVVVNAPYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYP 630
PP+ P P+Q P P ++ P PTT C+ P + PYP + PYP
Sbjct: 67 PPSPQYSPPPPPSQSSP-PRSRCPPVPTTGCCNQPPGP---PPSTMYSPPYPYFYTPPYP 122
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 478 PYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYP 630
P PT VP P +P P T S+P + T + P PV+ P P
Sbjct: 138 PTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTP 188
>At2g16050.1 68415.m01840 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 167
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 634 CSECAISGCSECAIPNNAGCTIPDNARCALPSPS 735
C+E I C+ N+ C +A CALPS S
Sbjct: 30 CNEVGIGSRYRCSGDNHGSCDFDLHAHCALPSAS 63
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.9 bits (64), Expect = 2.3
Identities = 31/108 (28%), Positives = 38/108 (35%)
Frame = +1
Query: 451 PPTNVVVNAPYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYP 630
PP N V + P + P P T+ P S P N LP P S P P
Sbjct: 110 PPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNP-PPPPESPPSLPAPDPPSNPLP 168
Query: 631 XCSECAISGCSECAIPNNAGCTIPDNARCALPSPSWCRRILDGSPPAD 774
S +P+ IP R LPSP R +PP+D
Sbjct: 169 PPKLVPPSHSPPRHLPSPPASEIPPPPR-HLPSPPASER--PSTPPSD 213
>At5g55520.1 68418.m06915 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333; expression supported
by MPSS
Length = 802
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 456 HKRRRQCALPDSGCAIPGNS-GCAIPDNSGVLHTRQLRGAP 575
HK + CAL DSG + GN ++P S +L L +P
Sbjct: 239 HKDHKDCALADSGPSAVGNGISISLPHQSRILEEPPLSESP 279
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +3
Query: 342 NNGLVKNSTRCLVNHHSPLYNILLLSTAPERGTRVDTAHKRRRQCALPDSGCAIPGNSGC 521
N GLVK S + +P+ N ++ AP R T + + +Q A+ + C I +SG
Sbjct: 342 NQGLVKESGTFVAQKLNPVMNTKTVTQAPIRRTASPSRAIKEQQEAVEE--CKIVVSSGT 399
Query: 522 AIPDNSGVLHTRQLR 566
+ V +R LR
Sbjct: 400 ELAKPQIVSRSRSLR 414
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 451 PPTNVVVNAPYPTQGVPYPATQGAPYPTTQGCSIPD 558
PP + PYP + PYP QG P + + + D
Sbjct: 246 PPPGAI-RGPYPPRFAPYPVNQGPPILSPEKLDLRD 280
>At4g15070.1 68417.m02315 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 889
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 688 GCTIPDNARCALPSPSWCRRILDGSPPADLN 780
GC+ +++CA S W + L+G P D+N
Sbjct: 602 GCSYVAHSKCATQSNVWDGKELEGEPEEDIN 632
>At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family
protein
Length = 477
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 584 NSGVYHTQLLRVCHTRXAQSAPY-PVAQNAPYPTTQGAPYPTTHGAPYPVHH 736
N G+ HT +V R + P+ P + P P+ Q + H P+ HH
Sbjct: 292 NLGLNHTVFGKVKQVRLSSILPHSPATSSTPSPSPQPETHQYPHHHPHHHHH 343
>At1g66440.1 68414.m07548 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 726
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 682 NAGCTIPDNARCALPSPSWCRRILDGSPPA 771
N+GCT +++CA S W L+G P A
Sbjct: 379 NSGCTYVAHSKCATQSNVWDGEDLEGKPEA 408
>At1g67870.1 68414.m07750 glycine-rich protein contains
non-consensus GG donor splice site at exon2; modeled to
est match.
Length = 279
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 740 HHDGLGKAHRALSGMVHPALLGMAHSEQPDMAH 642
HHD G H+ GM H + GM H M H
Sbjct: 138 HHDIHGMQHQGGHGMQHQGMHGMQHQGGHGMQH 170
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 740 HHDGLGKAHRALSGMVHPALLGMAHSEQPDMAH 642
H G G H+ + GM H GM H +M H
Sbjct: 194 HQGGHGMQHQDMHGMQHQGRHGMQHQGGHEMQH 226
>At4g02540.1 68417.m00347 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 822
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 655 GCSECAIPNNAGCTIPDNARCALPSPSWCRRILDGSPPADLN 780
GC C GC+ +++CA + W + L+G P D++
Sbjct: 478 GCYSCV---KDGCSYAAHSKCATQTNVWDGKELEGEPEEDMD 516
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 626 TRXAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPP 766
T Q++ + Q P P P P T YP G GY PP
Sbjct: 15 TGPGQNSERDINQPPPPPPQSQPPPPQTQQQTYPPVMGYPGYHQPPP 61
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Frame = +1
Query: 451 PPTNVVVNAPYPTQGVPYPATQGA---PYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSV 621
PPTN P P P P T + P P+T S P +S + + P + +
Sbjct: 18 PPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPL 77
Query: 622 PYP 630
P P
Sbjct: 78 PQP 80
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +2
Query: 644 APYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQT*MWRTSTXAPNLAAXP 823
+P P ++P P P P H P PVH S PP+ + + P + + P
Sbjct: 750 SPPPPPVHSPPPPVHSPPPPPVHSPPPPVH------SPPPPVHSPPPPVHSPPPPVHS-P 802
Query: 824 PXXSRRYTTXQPGSTP 871
P S Y+ P +P
Sbjct: 803 PPPSPIYSPPPPVFSP 818
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 451 PPTNVVVNAPYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYP 630
PP N + AP P G P GA P G + P N+ + +Q G+ P Q+ YP
Sbjct: 327 PPANNMGGAPPPNYGGGPPPQYGAVPPPQYGGAPPQNN--NYQQQGSGMQQPQYQN-NYP 383
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 647 PYPVAQNAPYPTTQGAPYPTTHGAPYP 727
PYP Q PYP APY PYP
Sbjct: 9 PYPYGQY-PYPYPYPAPYRPPSSEPYP 34
>At2g36270.1 68415.m04452 bZIP transcription factor family protein /
ABA-responsive element-binding protein, putative similar
to ABA-responsive element binding protein 1 (AREB1)
GI:9967417 from [Arabidopsis thaliana]; contains a bZIP
transcription factor basic domain signature (PDOC00036)
Length = 442
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 635 AQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPLQ 772
AQ Y V Q P+ G + Y G GGY APP+Q
Sbjct: 244 AQQQLYGVFQGTGDPSFPGQAMGVGDPSGYAKRTGGGGYQQAPPVQ 289
>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 644 APYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPP 766
AP P AP P AP P AP P + APP
Sbjct: 294 APTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPAPP 334
>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 644 APYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPP 766
AP P AP P AP P AP P + APP
Sbjct: 294 APTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPAPP 334
>At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein similar to human splicing
factor GB:CAA59494 GI:899298 from [Homo sapiens];
contains Pfam profile PF01805: Surp module
Length = 735
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 451 PPTNVVVNAPYPTQGVPYPATQGAPYP 531
PP N+ +N P P V YP GAP P
Sbjct: 548 PPQNLALNLPRPPPSVQYP---GAPRP 571
>At5g49580.1 68418.m06136 DNAJ heat shock N-terminal
domain-containing protein contains similarity to S-locus
protein 5 GI:6069485 from [Brassica rapa]; contains Pfam
profile PF00226 DnaJ domain
Length = 695
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 369 RCLVNHHSPLYNILLLSTAPERGTRVDTAHK 461
RC N H P +++ + +TA +RGT + K
Sbjct: 603 RCPANTHKPSFHVNMNATAAKRGTSGSSGQK 633
>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 418
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 635 AQSAPYPVAQNAPYPTTQGAPYPTTHGAPYP-VHHGVGGYSMAPP 766
A ++P+P ++P P+T P PT +PY H ++ APP
Sbjct: 44 ASASPFPFPNSSPAPSTFIYPPPTP--SPYTHAPHAPSPFNHAPP 86
>At3g02100.1 68416.m00176 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 464
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 466 VVNAPYPTQGVPYPATQGAPYPTTQGCSIP-DNSGVRHTRQLRGLP 600
VV PYP QG P + Y QG I N+ H R + LP
Sbjct: 14 VVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLP 59
>At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family
protein similar to proline-rich cell wall protein
[Gossypium barbadense] gi|451544|gb|AAA79364; contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 124
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = +1
Query: 469 VNAPYPTQGVPYPATQGAPYPTTQGCSIPDNSGVRHTRQLRGLPYPVAQSVPYPXCSECA 648
+ P T P P T P+P + P + Q+ LP P AQ + P +
Sbjct: 34 ITPPVTTTFPPLPTTTMPPFPPSTSLPQPTAFPPLPSSQIPSLPNP-AQPINIPNFPQIN 92
Query: 649 ISGCSECAIPNNAGCTIP 702
I +IPNN +P
Sbjct: 93 IPN-FPISIPNNFPFNLP 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,203,219
Number of Sequences: 28952
Number of extensions: 403261
Number of successful extensions: 1220
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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