Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_O08
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   7.0  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 408 TGPLRVVYVPIVLHYWHHERHLGEGGGD 325
           +G L +   P + H+ HH  H   GGG+
Sbjct: 110 SGALHLGQNPNLHHHHHHHHHGNNGGGN 137


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 372 LHYWHHERHLGEGGGDS 322
           LH+ HH  H    GG+S
Sbjct: 159 LHHHHHHHHNAPAGGES 175


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 372  LHYWHHERHLGEG 334
            LH+ HH  H GEG
Sbjct: 1318 LHHGHHHHHGGEG 1330


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,821
Number of Sequences: 2352
Number of extensions: 12587
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)