Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_O07
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0327 - 7284829-7284889,7284946-7286126 32 0.53
07_01_0080 + 587674-588510 31 1.2
07_01_0479 + 3606663-3607448 30 2.8
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 29 3.8
10_07_0170 - 13777590-13777973,13778073-13778339 29 3.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.8
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 3.8
04_01_0197 + 2323790-2324098,2324145-2324774 29 5.0
12_02_1174 - 26696869-26698191 28 8.7
11_01_0385 + 2915532-2916482 28 8.7
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 8.7
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.7
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 28 8.7
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 32.3 bits (70), Expect = 0.53
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 287 GGXPPPXXPPKXPPXXPPXXKXFFXXXGG 373
G PPP PP PP PP + ++ G
Sbjct: 50 GAHPPPPPPPPPPPPPPPRGRRYYRRVSG 78
>07_01_0080 + 587674-588510
Length = 278
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 269 PXKKXGGGXPPPXXPPKXPPXXPPXXKXF 355
P G PPP PP PP PP F
Sbjct: 95 PPPPPSSGSPPPPPPPPPPPPPPPPPPLF 123
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 230 GGGXPKKKXXFXXPXKKXGGGXPPPXXPPKXPPXXPP 340
GG ++ P G PPP PP PP PP
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPP 119
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 230 GGGXPKKKXXFXXPXKKXGGGXPPPXXPPKXPPXXPP 340
G G ++ P G PPP PP PP PP
Sbjct: 84 GDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/75 (28%), Positives = 24/75 (32%)
Frame = -3
Query: 452 PGXFKXXGXPPPGKKXXXXXKXGXGGPPPXXXKXXXFXGXKXGAXXGXPGGGGXPPPXFX 273
P + P P ++ GGPPP G PG G PPP
Sbjct: 175 PPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMR-GPPPMGPPQVRPGMPGGPPPGMR 233
Query: 272 XGXXKXFFFLGXPPP 228
G F G PPP
Sbjct: 234 PGMPPPPFRPGMPPP 248
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 296 PPPXXPPKXPPXXPP 340
PPP PPK PP PP
Sbjct: 43 PPPPPPPKPPPTVPP 57
>10_07_0170 - 13777590-13777973,13778073-13778339
Length = 216
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 348 FXXGGKXGGXXGGXXGGGXPPP 283
F GG GG GG GGG P P
Sbjct: 43 FLSGGGGGGGVGGGGGGGRPSP 64
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 269 PXKKXGGGXPPPXXPPKXPPXXPP 340
P K PPP PPK P PP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPP 340
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 296 PPPXXPPKXPPXXPPXXK 349
PPP PP+ PP PP K
Sbjct: 365 PPPPPPPRPPPPPPPIKK 382
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 296 PPPXXPPKXPPXXPPXXK 349
PPP PP PP PP K
Sbjct: 364 PPPPPPPPRPPPPPPPIK 381
>04_01_0197 + 2323790-2324098,2324145-2324774
Length = 312
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 290 GXPPPXXPPKXPPXXPP 340
G PPP PP PP PP
Sbjct: 25 GNPPPPPPPPPPPPPPP 41
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 296 PPPXXPPKXPPXXPPXXK 349
PPP PP PP PP K
Sbjct: 154 PPPPPPPPPPPPRPPSVK 171
>11_01_0385 + 2915532-2916482
Length = 316
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 242 PKKKXXFXXPXKKXGGGXPPPXXPPKXPPXXPP 340
PKK P K G PP P PP PP
Sbjct: 113 PKKHHEKAPPKSKHHGRHAPPDQPELSPPAPPP 145
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 269 PXKKXGGGXPPPXXPPKXPPXXPP 340
P PPP PP PP PP
Sbjct: 65 PHHHVSAAPPPPQTPPSPPPPPPP 88
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 296 PPPXXPPKXPPXXPPXXK 349
PPP PP PP PP K
Sbjct: 349 PPPPPPPPPPPPPPPPPK 366
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 269 PXKKXGGGXPPPXXPPKXPPXXPP 340
P PPP PP PP PP
Sbjct: 90 PASPTANASPPPSLPPPPPPLRPP 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,079,585
Number of Sequences: 37544
Number of extensions: 335535
Number of successful extensions: 2036
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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