Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_O04
         (1053 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U08281-1|AAA87058.1|  158|Drosophila melanogaster ejaculatory bu...    36   0.093
AY113640-1|AAM29645.1|  126|Drosophila melanogaster RH74005p pro...    36   0.093
AJ973478-1|CAJ01525.1|  126|Drosophila melanogaster hypothetical...    36   0.093
AE013599-3776|AAF47140.2|  126|Drosophila melanogaster CG11390-P...    36   0.093

>U08281-1|AAA87058.1|  158|Drosophila melanogaster ejaculatory bulb
           specific proteinIII protein.
          Length = 158

 Score = 35.9 bits (79), Expect = 0.093
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQ 343
           Y N DV+ I+ SDRL  G Y            +     K+L D + T C  C+EKQ
Sbjct: 20  YDNIDVDEILKSDRLF-GNYFKCLVDNGKCTPEGRELKKSLPDALKTECSKCSEKQ 74


>AY113640-1|AAM29645.1|  126|Drosophila melanogaster RH74005p
           protein.
          Length = 126

 Score = 35.9 bits (79), Expect = 0.093
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQ 343
           Y N DV+ I+ SDRL  G Y            +     K+L D + T C  C+EKQ
Sbjct: 25  YDNIDVDEILKSDRLF-GNYFKCLVDNGKCTPEGRELKKSLPDALKTECSKCSEKQ 79


>AJ973478-1|CAJ01525.1|  126|Drosophila melanogaster hypothetical
           protein protein.
          Length = 126

 Score = 35.9 bits (79), Expect = 0.093
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQ 343
           Y N DV+ I+ SDRL  G Y            +     K+L D + T C  C+EKQ
Sbjct: 25  YDNIDVDEILKSDRLF-GNYFKCLVDNGKCTPEGRELKKSLPDALKTECSKCSEKQ 79


>AE013599-3776|AAF47140.2|  126|Drosophila melanogaster CG11390-PA
           protein.
          Length = 126

 Score = 35.9 bits (79), Expect = 0.093
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQ 343
           Y N DV+ I+ SDRL  G Y            +     K+L D + T C  C+EKQ
Sbjct: 25  YDNIDVDEILKSDRLF-GNYFKCLVDNGKCTPEGRELKKSLPDALKTECSKCSEKQ 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,898,671
Number of Sequences: 53049
Number of extensions: 308399
Number of successful extensions: 287
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5392504656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)