Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_O04
         (1053 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    39   9e-05
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    39   9e-05
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    39   9e-05
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    30   0.030
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    30   0.030
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    29   0.053
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    29   0.053
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.0  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 38.7 bits (86), Expect = 9e-05
 Identities = 22/74 (29%), Positives = 37/74 (50%)
 Frame = +2

Query: 137 LLAA*SCQLXSQ*YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIAT 316
           L+AA   +  +  + N +V+ I+ SDRLLN  Y      +     +     + L D +AT
Sbjct: 16  LVAARPDESYTSKFDNINVDEILHSDRLLNN-YFKCLMDEGRCTAEGNELKRVLPDALAT 74

Query: 317 NCXXCTEKQNVTVR 358
           +C  CT+KQ   ++
Sbjct: 75  DCKKCTDKQREVIK 88


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 38.7 bits (86), Expect = 9e-05
 Identities = 22/74 (29%), Positives = 37/74 (50%)
 Frame = +2

Query: 137 LLAA*SCQLXSQ*YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIAT 316
           L+AA   +  +  + N +V+ I+ SDRLLN  Y      +     +     + L D +AT
Sbjct: 16  LVAARPDESYTSKFDNINVDEILHSDRLLNN-YFKCLMDEGRCTAEGNELKRVLPDALAT 74

Query: 317 NCXXCTEKQNVTVR 358
           +C  CT+KQ   ++
Sbjct: 75  DCKKCTDKQREVIK 88


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 38.7 bits (86), Expect = 9e-05
 Identities = 22/74 (29%), Positives = 37/74 (50%)
 Frame = +2

Query: 137 LLAA*SCQLXSQ*YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIAT 316
           L+AA   +  +  + N +V+ I+ SDRLLN  Y      +     +     + L D +AT
Sbjct: 16  LVAARPDESYTSKFDNINVDEILHSDRLLNN-YFKCLMDEGRCTAEGNELKRVLPDALAT 74

Query: 317 NCXXCTEKQNVTVR 358
           +C  CT+KQ   ++
Sbjct: 75  DCKKCTDKQREVIK 88


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 30.3 bits (65), Expect = 0.030
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQ 343
           Y N D++ ++ ++RLLN  Y      +           + L D +   C  C+EKQ
Sbjct: 28  YDNVDIDVVLNTERLLNA-YVNCLLDQGPCTPDAAELKRNLPDALENECSPCSEKQ 82


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 30.3 bits (65), Expect = 0.030
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQ 343
           Y N D++ ++ ++RLLN  Y      +           + L D +   C  C+EKQ
Sbjct: 28  YDNVDIDVVLNTERLLNA-YVNCLLDQGPCTPDAAELKRNLPDALENECSPCSEKQ 82


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 29.5 bits (63), Expect = 0.053
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQNVT 352
           Y + D++ I+ + R+L   Y      +     +     K L D ++T C  C EKQ  T
Sbjct: 25  YDDMDIDRILQNGRILTN-YIKCMLDEGPCTNEGRELKKILPDALSTGCNKCNEKQKHT 82


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 29.5 bits (63), Expect = 0.053
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 176 YXNFDVEPIVTSDRLLNGLYXPVXXTKAXVRLKPPTSXKALXDTIATNCXXCTEKQNVT 352
           Y + D++ I+ + R+L   Y      +     +     K L D ++T C  C EKQ  T
Sbjct: 25  YDDMDIDRILQNGRILTN-YIKCMLDEGPCTNEGRELKKILPDALSTGCNKCNEKQKHT 82


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 448  IPTPFLLXTLNIYSIPXXRYYAT 516
            +P+PF+    N+ +I   +Y+AT
Sbjct: 1170 MPSPFMAGAPNVPTILPEQYFAT 1192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,757
Number of Sequences: 438
Number of extensions: 2039
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35065791
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)