Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N22
(904 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 36 0.059
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 36 0.059
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 34 0.14
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 34 0.14
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 33 0.42
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 33 0.42
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 32 0.73
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 31 0.96
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 2.9
SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 5.1
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 29 5.1
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 29 6.8
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 28 9.0
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 28 9.0
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 35.5 bits (78), Expect = 0.059
Identities = 34/122 (27%), Positives = 38/122 (31%), Gaps = 6/122 (4%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGP-----KXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKG 399
P P P APG G GP + P GG + P P P + G
Sbjct: 464 PGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPG 523
Query: 398 GXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXP-X 222
P G P P P GAP P G GP PP + G P
Sbjct: 524 --INGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGN 581
Query: 221 PG 216
PG
Sbjct: 582 PG 583
Score = 34.7 bits (76), Expect = 0.10
Identities = 34/122 (27%), Positives = 37/122 (30%), Gaps = 6/122 (4%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKX-----PXPXGGGVFLSGXXXPXPPPXPEKKXKXKG 399
P P P APG G GP P GG + P P P + G
Sbjct: 379 PGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPG 438
Query: 398 GXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXP-X 222
P G P P P GAP P G GP PP + G P
Sbjct: 439 --INGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGN 496
Query: 221 PG 216
PG
Sbjct: 497 PG 498
Score = 33.1 bits (72), Expect = 0.32
Identities = 34/122 (27%), Positives = 35/122 (28%), Gaps = 6/122 (4%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKX-----PXPXGGGVFLSGXXXPXPPPXPEKKXKXKG 399
P P P APG G GP P GG + P P P G
Sbjct: 209 PGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGLPGPNG 268
Query: 398 GXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXP-X 222
P G P P P GAP P G GP PP G P
Sbjct: 269 --ILGPPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGN 326
Query: 221 PG 216
PG
Sbjct: 327 PG 328
Score = 31.1 bits (67), Expect = 1.3
Identities = 36/117 (30%), Positives = 37/117 (31%), Gaps = 1/117 (0%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXX 384
PP P PG GG G P G L G P PP P G
Sbjct: 147 PPGDVGP--PGNPGGPGLQGNHGN-PAGIQGPNGLPGPNGPLGPPGPPGDMGPPG----- 198
Query: 383 XPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXP-XPG 216
P +G Q P P P GAP P G GP PP G P PG
Sbjct: 199 LPGPQGPQMPPGPPGLP------------GAPGPKGPPGTNGPLGPPGDVGPPGNPG 243
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 35.5 bits (78), Expect = 0.059
Identities = 24/73 (32%), Positives = 28/73 (38%)
Frame = -3
Query: 437 PPPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXG 258
PPP P + G P + +Q+ P P P G APPP G
Sbjct: 315 PPPPPARM----GTAPPPPPPSRSSQRPP-----PPSRGAPPPPSMGMAPPPVGG-AAPP 364
Query: 257 PXXPPPKGGXPXP 219
P PPP GG P P
Sbjct: 365 PPPPPPVGGPPPP 377
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/120 (24%), Positives = 33/120 (27%), Gaps = 4/120 (3%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXX 384
PPP + AP P + P + G P PPP +
Sbjct: 288 PPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARM-GTAPPPPPPSRSSQRPPPPSRGAP 346
Query: 383 XPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXG----PXXPPPKGGXPXPG 216
P G P P P PPP P P PPP G P PG
Sbjct: 347 PPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPG 406
Score = 28.3 bits (60), Expect = 9.0
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXX 384
PPP AP GG P P P GG P PPP P +
Sbjct: 346 PPPPSMGMAPPPVGGA---APPPPPPPPVGG---------PPPPPPPIEGRPPSSLGNPP 393
Query: 383 XPXXKGAQQXPXXPXFPXK 327
P G P P P +
Sbjct: 394 PPPPPGRGAPPPGPMIPGR 412
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 35.1 bits (77), Expect = 0.078
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXX 384
PPP P P G P P GG P PPP P GG
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNA-------PPPPPPPGGSAPPPGGGAPP 972
Query: 383 XPXXKGAQQXPXXPXFP 333
P G P P P
Sbjct: 973 LPPPPGGSAPPPPPPPP 989
Score = 31.9 bits (69), Expect = 0.73
Identities = 26/76 (34%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Frame = -3
Query: 455 GXXXPXPPPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPP--- 285
G P PPP P GG P G P P P P GGAPP
Sbjct: 927 GGNAPLPPPPP-------GGSAPSQPPPPGGNAPPPPP--PPGGSAPPPG--GGAPPLPP 975
Query: 284 -PXGXFPXXGPXXPPP 240
P G P P PPP
Sbjct: 976 PPGGSAPPPPPPPPPP 991
Score = 31.5 bits (68), Expect = 0.96
Identities = 25/86 (29%), Positives = 25/86 (29%), Gaps = 7/86 (8%)
Frame = -3
Query: 455 GXXXPXPPPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXG 276
G P PPP P GG P G P P G APPP G
Sbjct: 916 GGSVPPPPPPP-------GGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGG 968
Query: 275 XFPXX-------GPXXPPPKGGXPXP 219
P P PPP P P
Sbjct: 969 GAPPLPPPPGGSAPPPPPPPPPPPPP 994
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = -3
Query: 434 PPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAP---PPXGXFPX 264
P E + GG + G P P P G AP PP G
Sbjct: 894 PRRNESPSQTPGGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGG--- 950
Query: 263 XGPXXPPPKGG-XPXPG 216
P PPP GG P PG
Sbjct: 951 NAPPPPPPPGGSAPPPG 967
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 34.7 bits (76), Expect = 0.10
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = -3
Query: 458 SGXXXPXPPPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPX 279
SG PPP P P P P P P G PPP
Sbjct: 339 SGGGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPP 398
Query: 278 GXFPXXG-PXXPPPKGGXPXPG 216
P G P PPP G P G
Sbjct: 399 P--PTNGPPPPPPPTNGPPSEG 418
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/117 (24%), Positives = 33/117 (28%), Gaps = 3/117 (2%)
Frame = -3
Query: 560 PPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXXX 381
PP + AP P GG + PPP P K G K
Sbjct: 125 PPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTF 184
Query: 380 PXXKGAQQXPXXPXFPXKXXF--XPXXXXGGAPPPXGXFPXXGPXXPPPKG-GXPXP 219
+ + P P P G PPP G P PPP G P P
Sbjct: 185 GNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLP 241
Score = 31.5 bits (68), Expect = 0.96
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 9/104 (8%)
Frame = -3
Query: 503 PKXKXPXPXGG----GVFLSGXXXPXPPPXPEK----KXKXKGGXKXXXPXXKGAQQXPX 348
P K P P G G + P PPP + P +G Q
Sbjct: 170 PMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSL 229
Query: 347 XPXFPXKXXFXPXXXXG-GAPPPXGXFPXXGPXXPPPKGGXPXP 219
P P G PPP P G PPPK P P
Sbjct: 230 APPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPP 273
Score = 29.9 bits (64), Expect = 2.9
Identities = 31/126 (24%), Positives = 35/126 (27%), Gaps = 11/126 (8%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKXPXPX-----GGGVFLSGXXXPXPPPX----PEKKX 411
PPP P G P + P G + S P PPP P
Sbjct: 263 PPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPP 322
Query: 410 KXKGGXKXXXPXXKGAQQXPXXPXF--PXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPK 237
+ P +G P P P P G AP P G P P PP
Sbjct: 323 PSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPS 382
Query: 236 GGXPXP 219
G P
Sbjct: 383 GKINPP 388
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/117 (24%), Positives = 33/117 (28%), Gaps = 3/117 (2%)
Frame = -3
Query: 560 PPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXXX 381
PP + AP P GG + PPP P K G K
Sbjct: 37 PPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTF 96
Query: 380 PXXKGAQQXPXXPXFPXKXXF--XPXXXXGGAPPPXGXFPXXGPXXPPPKG-GXPXP 219
+ + P P P G PPP G P PPP G P P
Sbjct: 97 GNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLP 153
Score = 31.5 bits (68), Expect = 0.96
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 9/104 (8%)
Frame = -3
Query: 503 PKXKXPXPXGG----GVFLSGXXXPXPPPXPEK----KXKXKGGXKXXXPXXKGAQQXPX 348
P K P P G G + P PPP + P +G Q
Sbjct: 82 PMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSL 141
Query: 347 XPXFPXKXXFXPXXXXG-GAPPPXGXFPXXGPXXPPPKGGXPXP 219
P P G PPP P G PPPK P P
Sbjct: 142 APPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPP 185
Score = 29.9 bits (64), Expect = 2.9
Identities = 31/126 (24%), Positives = 35/126 (27%), Gaps = 11/126 (8%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKXPXPX-----GGGVFLSGXXXPXPPPX----PEKKX 411
PPP P G P + P G + S P PPP P
Sbjct: 175 PPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPP 234
Query: 410 KXKGGXKXXXPXXKGAQQXPXXPXF--PXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPK 237
+ P +G P P P P G AP P G P P PP
Sbjct: 235 PSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPS 294
Query: 236 GGXPXP 219
G P
Sbjct: 295 GKINPP 300
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 33.9 bits (74), Expect = 0.18
Identities = 31/109 (28%), Positives = 34/109 (31%), Gaps = 2/109 (1%)
Frame = -3
Query: 551 PKPXAPGXXGGXXXXGP-KXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXXXPX 375
P P G G G + P P G G G P P G + P
Sbjct: 514 PPPPGAGQGWGQPPPGAGQGGGPPPPGAG---QGGGPPPPGAGQGWGQPPPGAGQGGGPP 570
Query: 374 XKGAQQX-PXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGG 231
GA Q P P + P GG PPP G G PPP G
Sbjct: 571 PPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWG--LPPPGSG 617
Score = 33.1 bits (72), Expect = 0.32
Identities = 34/115 (29%), Positives = 36/115 (31%), Gaps = 5/115 (4%)
Frame = -3
Query: 545 PXAPGXXGGXXXXGP-KXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXXXPXXK 369
P G GG G + P P G G G P P G + P
Sbjct: 494 PPGAGQGGGPPPPGAGQGGGPPPPGAG---QGWGQPPPGAGQGGGPPPPGAGQGGGPPPP 550
Query: 368 GAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKG----GXPXPG 216
GA Q P P GG PPP P G PPP G G P PG
Sbjct: 551 GAGQGWGQPP--------PGAGQGGGPPP----PGAGQGGPPPPGAGQEGPPPPG 593
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 6/71 (8%)
Frame = +1
Query: 430 GGGXGXXXPLKKTXXXXXXXXXFXGPXSXXPPXXPGAX------GFGXGGGXXPPPRGXF 591
GGG G P G PP G G G GGG PP G
Sbjct: 485 GGGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQG 544
Query: 592 CXPPXXGXXRG 624
PP G +G
Sbjct: 545 GGPPPPGAGQG 555
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 32.7 bits (71), Expect = 0.42
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 299 GGAPPPXGXFPXXGPXXPPPKGGXPXP 219
GG PP G +P G PP GG P P
Sbjct: 35 GGYPPAPGGYPPSGGYGYPPAGGYPPP 61
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = -3
Query: 314 PXXXXGGAPPPX---GXFPXXGPXXPPPKGGXPXP 219
P GG PPP G FP P PPP GG P P
Sbjct: 645 PNPFFGGIPPPPPGGGMFPP--PPPPPPGGGVPGP 677
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 31.9 bits (69), Expect = 0.73
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 368 GAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXPXP 219
GA P P P GGAPPP P P PP GG P P
Sbjct: 288 GAPVPPPPPADGSAPAPPPPPPPGGAPPP----PPPPPPPPPGDGGAPPP 333
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -3
Query: 299 GGAP---PPXGXFPXXGPXXPPPKGGXPXP 219
GGAP PP P PPP GG P P
Sbjct: 287 GGAPVPPPPPADGSAPAPPPPPPPGGAPPP 316
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 314 PXXXXGGAPPPXGXFPXXGPXXPPPKGGXPXPG 216
P G AP P P G PPP P PG
Sbjct: 294 PPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPG 326
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 368 GAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXP 225
G Q P P P G PPP G +P PPP G P
Sbjct: 444 GMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPP 491
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Frame = -3
Query: 434 PPXPEKKXKXKGGXKXXXPXXKGAQQXPXX-PXFPXKXXFXPXXXXGGAPPPXGXFPXX- 261
PP P+ + P G Q P P P P G PPP G P
Sbjct: 428 PPPPQHTGPPQPRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPF 487
Query: 260 GPXXP------PPKGGXPXP 219
GP P PP+G P P
Sbjct: 488 GPPPPFYRGPPPPRGMPPPP 507
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 31.5 bits (68), Expect = 0.96
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 290 PPPXGXFPXXGPXXPPPKGGXPXP 219
PPP FP P PPP G P P
Sbjct: 200 PPPPPGFPGGAPPPPPPPFGAPPP 223
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 314 PXXXXGGAPPPXGXFPXXGPXXPPPKGGXPXP 219
P G PPP G P P PP G P P
Sbjct: 284 PPLTGGMLPPPFGGHPAAAPPPPPLPAGVPAP 315
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.9 bits (64), Expect = 2.9
Identities = 31/116 (26%), Positives = 33/116 (28%), Gaps = 3/116 (2%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKX--KXPXPXGGGVFLSGXXX-PXPPPXPEKKXKXKGGX 393
PPP P + GPK P G+ G P PP P K G
Sbjct: 340 PPPVPSATSAPPPWATSNSGPKPLMSTPVQRPPGMRPPGAGNGPGGPPPPWSKP----GG 395
Query: 392 KXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXP 225
P G P P G PPP FP P PPP P
Sbjct: 396 ILPGPPPPGPPMLNMAPSIPPWQT-----TPGYIPPPPPGFPQFQPPPPPPPSDAP 446
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -3
Query: 299 GGAPPPXGXFPXXGPXXPP-PKGGXPXP 219
GG P P +P G PP P GG P P
Sbjct: 577 GGYPAPTPSYPQPGTYPPPHPSGGYPQP 604
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = -3
Query: 443 PXPPPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPX 264
P PPP P P A + P P P GG PPP P
Sbjct: 108 PTPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPP-----PIAPAT--GGPPPPPPIAPA 160
Query: 263 XGPXXPPP 240
G PPP
Sbjct: 161 TGGPPPPP 168
Score = 29.5 bits (63), Expect = 3.9
Identities = 34/122 (27%), Positives = 37/122 (30%), Gaps = 6/122 (4%)
Frame = -3
Query: 563 PPPXPK-PXAPGXXGGXXXX--GPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGX 393
PPP P+ P P P + P P +G P PP P G
Sbjct: 110 PPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPAT------GG 163
Query: 392 KXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPP---KGGXPX 222
P A P P P P GG PPP P P PPP P
Sbjct: 164 PPPPPPIAPAATVPA-PAVPLAAA-SPPPPSGGPPPPP---PPPPPPPPPPILELAAPPP 218
Query: 221 PG 216
PG
Sbjct: 219 PG 220
>SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 29.5 bits (63), Expect = 3.9
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 5/101 (4%)
Frame = -3
Query: 503 PKXKXPXPXGGGVFLSGXXXPXPP---PXPEKKXKXKGGXKXXXPXXKGAQQXPXXPX-F 336
P K P P GGG + P P P P + G P + P
Sbjct: 362 PAEKPPLPEGGGFIPTRRGVPNPRQGGPNPGLNNREPGRGNLGAPYQERPNPGPGLGRPN 421
Query: 335 PXKXXFXPXXXXG-GAPPPXGXFPXXGPXXPPPKGGXPXPG 216
P P G G P P P G P P G P PG
Sbjct: 422 PGFGRPNPGPNLGLGRPNPGLERPNLGLWRPNPGFGRPNPG 462
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 3.9
Identities = 27/114 (23%), Positives = 28/114 (24%)
Frame = -3
Query: 560 PPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXXX 381
PP P P P P P P S PPP P
Sbjct: 109 PPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPP 168
Query: 380 PXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXPXP 219
P P P P + P PPP P PPP P P
Sbjct: 169 PPNAPYPPPPYPP--PPNPPYPPPPNPPYPPPPNA------PNPPPPNPPYPPP 214
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 296 GAPPPXGXFPXXGPXXPPPKGGXP 225
G P P G P GP PPP GG P
Sbjct: 410 GPPGPHG--PPFGPRGPPPHGGPP 431
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = -3
Query: 368 GAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXPXP 219
G Q P P + P PPP P P PPP+ P P
Sbjct: 659 GGQTISVNPSIPIQILPIPIQTMVPPPPPPPPPPPPPPPPPPPQPSTPPP 708
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 29.1 bits (62), Expect = 5.1
Identities = 27/113 (23%), Positives = 32/113 (28%), Gaps = 7/113 (6%)
Frame = -3
Query: 536 PGXXGGXXXXGPKXKXPXPXGGGVF-------LSGXXXPXPPPXPEKKXKXKGGXKXXXP 378
PG G GP+ + P G L G P PP + KG
Sbjct: 905 PGRDGMKGDPGPRGRDGLPGEPGARGDIGSRGLPGEDGPRGPPGIQGMKGAKGDAITGPT 964
Query: 377 XXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPPPKGGXPXP 219
G P P + G P G GP PP + G P P
Sbjct: 965 GPPGPPGLPGRPGLKGERGRDGLDGQNGLPGIPGPKGDTGPVGPPGRPGLPGP 1017
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/117 (23%), Positives = 35/117 (29%), Gaps = 2/117 (1%)
Frame = -3
Query: 560 PPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXP-EKKXKXKGGXKXX 384
PP P G G GP P + G P P P ++ + G
Sbjct: 111 PPPGHPPMGGGYPGQQPGGP----PPSYDSTMQQGGSYPPGQQPYPGQQAYPGQPGASPQ 166
Query: 383 XPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXX-GPXXPPPKGGXPXPG 216
G +P K + P G G +P G PPP GG P G
Sbjct: 167 GQPYPGQSYPQGQEPYPEKGGYPP----AGVGQHSGPYPGQPGMWGPPPMGGPPPMG 219
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 296 GAPPPXGXFPXXGPXXPPPKG-GXP 225
G PPP G P P PPP G G P
Sbjct: 213 GGPPPMGGPPGGYPPPPPPPGAGDP 237
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/85 (28%), Positives = 29/85 (34%), Gaps = 12/85 (14%)
Frame = -3
Query: 434 PPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPX--FPXKXXFXPXXXXGGAPPPX------ 279
PP P + +GG G P P +P + G APPP
Sbjct: 156 PPPPGTQPPGQGGYPGYNQPPPGHYPAPGQPGGYYPPPGGYQQPPPGGYAPPPYVPQEGG 215
Query: 278 GXFPXXGPXX----PPPKGGXPXPG 216
G P P PPP+G P PG
Sbjct: 216 GIPPQNHPLTNYPAPPPQGYAPPPG 240
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -3
Query: 314 PXXXXGGAPPPXGX-FPXXGPXXPPPKGGXPXP 219
P G PP G FP GP PPP G P
Sbjct: 225 PGGMPPGRMPPQGLPFPPPGPIPPPPGAGGMRP 257
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = -3
Query: 443 PXPPPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPX 264
P PPP P P Q P P P P PPP P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPP--PPPPPPPPPPPPPPPPPPPAPPPP 423
Query: 263 XGPXXPPP 240
P PPP
Sbjct: 424 PPPPPPPP 431
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 563 PPPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPE 420
PPP P P G + P P G S P PPP PE
Sbjct: 886 PPPPPPPVMKKPSRGGSLKESRLHPPLPSIHGSTDSLDSLPLPPPPPE 933
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -3
Query: 362 QQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXGPXXPP-PKGGXPXPG 216
+Q P P F P G P P G GP P PKG PG
Sbjct: 1649 RQQPWYPVFHYPAPPPPPPPAPGPPGPDGPMGLPGPQGPDGPKGPPGPPG 1698
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -3
Query: 314 PXXXXGGAPPPXGXFPXXG---PXXPPPKGGXPXP 219
P GGAPPP P G P PPP GG P
Sbjct: 668 PGGQAGGAPPPPPP-PLPGGAAPPPPPPIGGGAPP 701
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,181,881
Number of Sequences: 59808
Number of extensions: 203003
Number of successful extensions: 909
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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