Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N22
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 19/73 (26%), Positives = 21/73 (28%)
 Frame = -3

Query: 437 PPPXPEKKXKXKGGXKXXXPXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPPPXGXFPXXG 258
           PPP P              P      + P  P  P +  F       G P      P   
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFP-----AGFPNLPNAQPPPA 584

Query: 257 PXXPPPKGGXPXP 219
           P  PPP G  P P
Sbjct: 585 PPPPPPMGPPPSP 597



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = -3

Query: 560 PPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPP 429
           P    P   G  G     GP    P P  GG  L+      PPP
Sbjct: 508 PNDGPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPP 551


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 20/92 (21%), Positives = 24/92 (26%)
 Frame = -3

Query: 560 PPXPKPXAPGXXGGXXXXGPKXKXPXPXGGGVFLSGXXXPXPPPXPEKKXKXKGGXKXXX 381
           PP P+   P    G    G   +   P  GG++      P P           G      
Sbjct: 186 PPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQ 245

Query: 380 PXXKGAQQXPXXPXFPXKXXFXPXXXXGGAPP 285
           P    AQ     P         P    GG  P
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRP 277



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
 Frame = -3

Query: 563 PPPXPKPXAPGXX-----GGXXXXGPKXKXPXPXGGG 468
           PPP  +P AP        GG    G K     P GGG
Sbjct: 495 PPPGGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNGGG 531


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 535  GAXGFGXGGGXXPPPRGXFC 594
            G+ G G GGG    P G  C
Sbjct: 1035 GSVGGGGGGGGSDEPNGMLC 1054


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,005
Number of Sequences: 2352
Number of extensions: 6403
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)