Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N21
(907 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 36 0.034
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.24
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 0.25
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 33 0.32
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 33 0.32
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.32
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 32 0.55
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.3
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.3
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 30 2.2
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 30 3.0
SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 3.9
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 29 6.8
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 7.2
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 28 9.0
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 28 9.0
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 36.3 bits (80), Expect = 0.034
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPP+ P GG PPPPP P
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPP 377
Score = 34.7 bits (76), Expect = 0.10
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PP PPPPP+ P PPPPP
Sbjct: 298 PPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPP 330
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP + PPPP P PPPPP ++P
Sbjct: 299 PPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRP 338
Score = 30.7 bits (66), Expect = 1.7
Identities = 27/106 (25%), Positives = 30/106 (28%), Gaps = 1/106 (0%)
Frame = +3
Query: 450 PXGGGGGGXXPXKKXPPPPXXGGGXXXXXXXXXXXXXXXXXXXXXXXXXXLPP-GGXXXF 626
P G P + PPPP G P G
Sbjct: 290 PPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPP 349
Query: 627 SXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
S PP PPPPP P GG PPPPP + +P
Sbjct: 350 SMGMAPPPVGGAAPPPPP-----PPPVGG-----PPPPPPPIEGRP 385
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP P G PPPPP P
Sbjct: 369 PPVGGPPPPPPPIEGRPPSSLGNP---PPPPPPGRGAPPP 405
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP P G PPPPP + P
Sbjct: 368 PPPVGGPPPPPPPIEGRPPSSLG----NPPPPPPPGRGAP 403
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 520 PPPXXGGGGXFXXGKXPPPPPP 455
PPP G G PPPPPP
Sbjct: 377 PPPPIEGRPPSSLGNPPPPPPP 398
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPP 740
PPGG S PP PPPPP + GG PPPP
Sbjct: 936 PPGG----SAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPP 977
Score = 32.3 bits (70), Expect = 0.55
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PPGG + PP PPP P GG PPPPP
Sbjct: 947 PPGG----NAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPP 989
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +3
Query: 645 PPQKXXXPPPPP---NXXXTPKXXGGXFXXXPPPP 740
PP PPPPP N P GG PPPP
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPP 948
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +2
Query: 578 GGEXXXXPPPGGEXXVLPXXXGX--PPKXXFXPXPAQXPXNXKAXRGXLXXXPPPPPXR 748
G PPPGG P G PP P P P A PPPPP R
Sbjct: 939 GSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAP-PLPPPPGGSAPPPPPPPPPPPPPMR 996
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPPQKXXXP-PPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PPGG S PP P PPPP P PPPPP P
Sbjct: 914 PPGG----SVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAP 964
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449
PPP GG G PP PPP G
Sbjct: 955 PPPPPGGSAPPPGGGAPPLPPPPG 978
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 4/28 (14%)
Frame = -1
Query: 520 PPPXXGGGGXFXX----GKXPPPPPPXG 449
PPP GG G PPPPPP G
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPG 960
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 33.5 bits (73), Expect = 0.24
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PP PPPPP P GG PPPPP
Sbjct: 307 PPPPGGAPPPPPPPPPPPPGDGG--APPPPPPP 337
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PPGG + PP PPPP P GG PPPPP
Sbjct: 667 PPGGQAGGAPPPPPPPLPGGAAPPPP-----PPIGGG---APPPPPP 705
Score = 27.9 bits (59), Expect(2) = 0.25
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 520 PPPXXGGGGXFXXGKXPPPPPP 455
PPP GG G PPPPPP
Sbjct: 664 PPPPPGGQAG---GAPPPPPPP 682
Score = 24.2 bits (50), Expect(2) = 0.25
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1
Query: 340 PXFXGGGXPXXXXFFXXGGPXPPPRG 263
P GG P G P PPP G
Sbjct: 681 PPLPGGAAPPPPPPIGGGAPPPPPPG 706
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 639 GXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXK 755
G PQ PPPPP P G PPPPP K
Sbjct: 362 GRAPQPLGGPPPPPPGRRPP---SGKINPPPPPPPAMDK 397
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXP-----PPPPXXXKKKP 764
PP K PPPP P GG P PPPP K P
Sbjct: 133 PPPKNS-SPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPP 176
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 2/56 (3%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPP--QKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP G PP P PPP P G PPPP P
Sbjct: 218 PPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPP 273
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 639 GXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXK 755
G PQ PPPPP P G PPPPP K
Sbjct: 274 GRAPQPLGGPPPPPPGRRPP---SGKINPPPPPPPAMDK 309
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXP-----PPPPXXXKKKP 764
PP K PPPP P GG P PPPP K P
Sbjct: 45 PPPKNS-SPPPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPP 88
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 2/56 (3%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPP--QKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP G PP P PPP P G PPPP P
Sbjct: 130 PPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPP 185
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.32
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PPQ PPPPP P PPPPP P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 31.5 bits (68), Expect = 0.97
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP +P PPPPP P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 31.5 bits (68), Expect = 0.97
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP P PPPPP P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP P PPPPP P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP P PPPPP P
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP P PPPPP P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PP PPPPP P PPPPP
Sbjct: 400 PPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
P PPPPP+ P+ PPPPP P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPPP+ P PPPPP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPP----PPSPPPPPQPPPPPP 400
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPP P P PPPPP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP PPPP P PPPPP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +3
Query: 627 SXXXGXPP-----QKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
S G PP Q PPPPP TP PPPPP P
Sbjct: 263 SSSKGHPPIPSASQNATPPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPP 313
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPP 743
PPPPP P PPPPP
Sbjct: 302 PPPPPTDFAPPPPPPEPTSELPPPPP 327
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.9 bits (69), Expect = 0.73
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP + PP PPPPP P PPPPP P
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPP 407
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PP PPPPP P PPPPP
Sbjct: 377 PPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PP PPPPP P PPPPP
Sbjct: 378 PPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPP 410
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PP P PPP TP PPPPP P
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPP 387
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PP PPPPP P F PPP P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKPXXW 773
PP G P PPPP P G PPPPP KP W
Sbjct: 718 PPPGCAGLPPPPPSPQPGCAGLPPPP-----PPPPPGCAGLPPPPPPIDVPMKPLFW 769
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 648 PQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
P PPPP P GG PPPPP
Sbjct: 276 PTSQPPPPPPLTGGMLPPPFGGHPAAAPPPPP 307
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449
PPP F G PPPPPP G
Sbjct: 196 PPPPPPPPPGFPGGAPPPPPPPFG 219
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
PPPPP P PPPPP ++ P
Sbjct: 555 PPPPPGVDIPPPLPPSEDPKPPPPPPEPPEECP 587
>SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +3
Query: 639 GXPPQKXXXPPPPP-NXXXTPKXXGGXFXXXPPPP 740
G PP PPPP N P G + PPPP
Sbjct: 358 GQPPPGTYYPPPPQGNYNQYPVPGGQNYAGAPPPP 392
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 624 FSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
FS PP PPPPP+ P PPPPP
Sbjct: 1150 FSVRDQIPPPPPPPPPPPPSSPSPPPP-----PPPPPPPP 1184
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 517 PPXXGGGGXFXXGKXPPPPPPXG 449
PP GGG F PPPPPP G
Sbjct: 653 PPPPPGGGMF---PPPPPPPPGG 672
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
PP PP PP P G PP PP
Sbjct: 183 PPGVLAPPPAPPGVLPPPPAPPGALIPPPPAPP 215
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 23.8 bits (49), Expect(2) = 7.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -1
Query: 514 PXXGGGGXFXXGKXPPPPPP 455
P G G PPPPPP
Sbjct: 607 PSDGSQGSHGQKDPPPPPPP 626
Score = 23.0 bits (47), Expect(2) = 7.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 478 KXPPPPPPXGXK 443
K PPPPPP K
Sbjct: 618 KDPPPPPPPRNK 629
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKK 758
PP K P PPN P G PPPPP K
Sbjct: 782 PPTKPATPRVPPNIPSRPP---GARPTPPPPPPGKPTK 816
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +3
Query: 600 LPPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764
+PP G F PP PP PP P+ PP PP +P
Sbjct: 1241 MPPDGPPKFMGLPPPPPGMRPMPPQPPFMPPPPRMQ----PPGPPGPPGPPGPQP 1291
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 600 LPPGGXXXFSXXXGXPPQKXXXPPPPPN 683
+PP G G PP PPPPP+
Sbjct: 274 MPPPGMPPPMPPGGMPPNMEQPPPPPPS 301
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 648 PQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743
P PPPPP P PPPPP
Sbjct: 190 PWTSVPPPPPPGPGGIPPPPPPIRGGVPPPPP 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.152 0.537
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,365,320
Number of Sequences: 59808
Number of extensions: 279301
Number of successful extensions: 1576
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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