BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_N21 (907 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.023 U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.023 AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.023 Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 35 0.092 AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.37 AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.37 AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.37 Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.49 U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.49 AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.49 Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 0.67 Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.5 U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.5 U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.5 Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.0 Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.0 AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 30 2.0 AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.0 Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.6 Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.6 V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.6 J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.6 AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.6 AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 30 2.6 Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 3.5 AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.6 AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.6 AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 4.6 AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.0 >U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect protein 1, isoformb protein. Length = 1437 Score = 36.7 bits (81), Expect = 0.023 Identities = 19/47 (40%), Positives = 19/47 (40%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPGG S PP PPPP P G F PPPPP Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPPGGFKGGPPPPP 788 Score = 35.9 bits (79), Expect = 0.040 Identities = 18/54 (33%), Positives = 19/54 (35%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PPGG + PP PP P GG PPPPP K P Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784 Score = 33.5 bits (73), Expect = 0.21 Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%) Frame = +3 Query: 600 LPP--GGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 LPP GG G PP PPPPP P G PPPPP P Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG---PPPPPPPPGGCPPPP 772 Score = 33.5 bits (73), Expect = 0.21 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP GG G PPPPPP G Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 18/48 (37%) Frame = +2 Query: 599 PPPGGEXXVLPXXXGXPPKXXFXPXPAQXPXNXKAXRGXLXXXPPPPP 742 PPPGG LP G PP P P G PPPPP Sbjct: 746 PPPGG----LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789 Score = 31.9 bits (69), Expect = 0.65 Identities = 14/30 (46%), Positives = 14/30 (46%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXGXKXXXG 431 PPP GG G PPPPPP G G Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISG 756 Score = 31.5 bits (68), Expect = 0.86 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP GG G PPPPPP G Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG 766 Score = 30.7 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 16/48 (33%) Frame = +2 Query: 599 PPPGGEXXVLPXXXGXPPKXXFXPXPAQXPXNXKAXRGXLXXXPPPPP 742 PPPGG + PP P P G PPPPP Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777 Score = 30.3 bits (65), Expect = 2.0 Identities = 15/35 (42%), Positives = 15/35 (42%) Frame = +3 Query: 639 GXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G PP PPPPP P G PPPPP Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGG----PPPPPPP 748 Score = 29.1 bits (62), Expect = 4.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP G F G PPPPPP G Sbjct: 770 PPPPPPPPGGFKGG--PPPPPPPG 791 >U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect protein 1, isoforma protein. Length = 1435 Score = 36.7 bits (81), Expect = 0.023 Identities = 19/47 (40%), Positives = 19/47 (40%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPGG S PP PPPP P G F PPPPP Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPPGGFKGGPPPPP 788 Score = 35.9 bits (79), Expect = 0.040 Identities = 18/54 (33%), Positives = 19/54 (35%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PPGG + PP PP P GG PPPPP K P Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784 Score = 33.5 bits (73), Expect = 0.21 Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%) Frame = +3 Query: 600 LPP--GGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 LPP GG G PP PPPPP P G PPPPP P Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG---PPPPPPPPGGCPPPP 772 Score = 33.5 bits (73), Expect = 0.21 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP GG G PPPPPP G Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 18/48 (37%) Frame = +2 Query: 599 PPPGGEXXVLPXXXGXPPKXXFXPXPAQXPXNXKAXRGXLXXXPPPPP 742 PPPGG LP G PP P P G PPPPP Sbjct: 746 PPPGG----LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789 Score = 31.9 bits (69), Expect = 0.65 Identities = 14/30 (46%), Positives = 14/30 (46%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXGXKXXXG 431 PPP GG G PPPPPP G G Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISG 756 Score = 31.5 bits (68), Expect = 0.86 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP GG G PPPPPP G Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG 766 Score = 30.7 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 16/48 (33%) Frame = +2 Query: 599 PPPGGEXXVLPXXXGXPPKXXFXPXPAQXPXNXKAXRGXLXXXPPPPP 742 PPPGG + PP P P G PPPPP Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777 Score = 30.3 bits (65), Expect = 2.0 Identities = 15/35 (42%), Positives = 15/35 (42%) Frame = +3 Query: 639 GXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G PP PPPPP P G PPPPP Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGG----PPPPPPP 748 Score = 29.1 bits (62), Expect = 4.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP G F G PPPPPP G Sbjct: 770 PPPPPPPPGGFKGG--PPPPPPPG 791 >AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. Length = 1018 Score = 36.7 bits (81), Expect = 0.023 Identities = 19/47 (40%), Positives = 19/47 (40%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPGG S PP PPPP P G F PPPPP Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPPGGFKGGPPPPP 371 Score = 35.9 bits (79), Expect = 0.040 Identities = 18/54 (33%), Positives = 19/54 (35%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PPGG + PP PP P GG PPPPP K P Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367 Score = 33.5 bits (73), Expect = 0.21 Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%) Frame = +3 Query: 600 LPP--GGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 LPP GG G PP PPPPP P G PPPPP P Sbjct: 302 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG---PPPPPPPPGGCPPPP 355 Score = 33.5 bits (73), Expect = 0.21 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP GG G PPPPPP G Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGG 350 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 18/48 (37%) Frame = +2 Query: 599 PPPGGEXXVLPXXXGXPPKXXFXPXPAQXPXNXKAXRGXLXXXPPPPP 742 PPPGG LP G PP P P G PPPPP Sbjct: 329 PPPGG----LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372 Score = 31.9 bits (69), Expect = 0.65 Identities = 14/30 (46%), Positives = 14/30 (46%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXGXKXXXG 431 PPP GG G PPPPPP G G Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISG 339 Score = 31.5 bits (68), Expect = 0.86 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP GG G PPPPPP G Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPG 349 Score = 30.7 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 16/48 (33%) Frame = +2 Query: 599 PPPGGEXXVLPXXXGXPPKXXFXPXPAQXPXNXKAXRGXLXXXPPPPP 742 PPPGG + PP P P G PPPPP Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360 Score = 30.3 bits (65), Expect = 2.0 Identities = 15/35 (42%), Positives = 15/35 (42%) Frame = +3 Query: 639 GXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G PP PPPPP P G PPPPP Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGG----PPPPPPP 331 Score = 29.1 bits (62), Expect = 4.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP G F G PPPPPP G Sbjct: 353 PPPPPPPPGGFKGG--PPPPPPPG 374 >Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical protein ZC168.5 protein. Length = 172 Score = 34.7 bits (76), Expect = 0.092 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +3 Query: 648 PQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PQ+ PPPPP P GG + PPPPP Sbjct: 33 PQQCCCPPPPP-----PPPCGGGYEAPPPPPP 59 >AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform b protein. Length = 518 Score = 32.7 bits (71), Expect = 0.37 Identities = 17/54 (31%), Positives = 18/54 (33%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PP G + PP PPPP P G PPPPP P Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG----SPPPPPAGGSPPP 291 Score = 30.7 bits (66), Expect = 1.5 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP G G PPPPPP G Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRG 305 Score = 29.9 bits (64), Expect = 2.6 Identities = 14/46 (30%), Positives = 15/46 (32%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPP 740 PP G PP PPPP +P PPPP Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303 Score = 28.7 bits (61), Expect = 6.0 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PPPPP +P G PPPPP P Sbjct: 237 PPPPPPPKGSPPLAGS---GSPPPPPAAGSPPP 266 Score = 28.7 bits (61), Expect = 6.0 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPP 455 PPP GG PPPPPP Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPP 302 Score = 28.7 bits (61), Expect = 6.0 Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGG----XFXXXPPPPPXXXKKKP 764 PP G G PP PP P GG PPPPP ++ P Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340 Score = 28.3 bits (60), Expect = 8.0 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGG----XFXXXPPPPPXXXKKKP 764 PP+ PPPPP P GG PPPPP P Sbjct: 266 PPRTGS-PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308 >AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform c protein. Length = 539 Score = 32.7 bits (71), Expect = 0.37 Identities = 17/54 (31%), Positives = 18/54 (33%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PP G + PP PPPP P G PPPPP P Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG----SPPPPPAGGSPPP 312 Score = 30.7 bits (66), Expect = 1.5 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP G G PPPPPP G Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRG 326 Score = 29.9 bits (64), Expect = 2.6 Identities = 14/46 (30%), Positives = 15/46 (32%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPP 740 PP G PP PPPP +P PPPP Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324 Score = 28.7 bits (61), Expect = 6.0 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PPPPP +P G PPPPP P Sbjct: 258 PPPPPPPKGSPPLAGS---GSPPPPPAAGSPPP 287 Score = 28.7 bits (61), Expect = 6.0 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPP 455 PPP GG PPPPPP Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPP 323 Score = 28.7 bits (61), Expect = 6.0 Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGG----XFXXXPPPPPXXXKKKP 764 PP G G PP PP P GG PPPPP ++ P Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361 Score = 28.3 bits (60), Expect = 8.0 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGG----XFXXXPPPPPXXXKKKP 764 PP+ PPPPP P GG PPPPP P Sbjct: 287 PPRTGS-PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329 >AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform a protein. Length = 524 Score = 32.7 bits (71), Expect = 0.37 Identities = 17/54 (31%), Positives = 18/54 (33%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PP G + PP PPPP P G PPPPP P Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG----SPPPPPAGGSPPP 297 Score = 30.7 bits (66), Expect = 1.5 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP G G PPPPPP G Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRG 311 Score = 29.9 bits (64), Expect = 2.6 Identities = 14/46 (30%), Positives = 15/46 (32%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPP 740 PP G PP PPPP +P PPPP Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309 Score = 28.7 bits (61), Expect = 6.0 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PPPPP +P G PPPPP P Sbjct: 243 PPPPPPPKGSPPLAGS---GSPPPPPAAGSPPP 272 Score = 28.7 bits (61), Expect = 6.0 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPP 455 PPP GG PPPPPP Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPP 308 Score = 28.7 bits (61), Expect = 6.0 Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Frame = +3 Query: 603 PPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGG----XFXXXPPPPPXXXKKKP 764 PP G G PP PP P GG PPPPP ++ P Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346 Score = 28.3 bits (60), Expect = 8.0 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGG----XFXXXPPPPPXXXKKKP 764 PP+ PPPPP P GG PPPPP P Sbjct: 272 PPRTGS-PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314 >Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein C08B11.5 protein. Length = 388 Score = 32.3 bits (70), Expect = 0.49 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP PPPPP P GG PPPPP Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGG---MPPPPPP 339 Score = 31.1 bits (67), Expect = 1.1 Identities = 13/33 (39%), Positives = 13/33 (39%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP PPPPP G PPPPP Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322 Score = 28.7 bits (61), Expect = 6.0 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPPPP+ P G PPPPP Sbjct: 364 PPPPPSRPPAPPSGHGMI--PPPPPP 387 >U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding protein protein. Length = 398 Score = 32.3 bits (70), Expect = 0.49 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP PPPPP P GG PPPPP Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGG---MPPPPPP 349 Score = 31.1 bits (67), Expect = 1.1 Identities = 13/33 (39%), Positives = 13/33 (39%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP PPPPP G PPPPP Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332 Score = 28.7 bits (61), Expect = 6.0 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPPPP+ P G PPPPP Sbjct: 374 PPPPPSRPPAPPSGHGMI--PPPPPP 397 >AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical protein T22D1.2 protein. Length = 302 Score = 32.3 bits (70), Expect = 0.49 Identities = 14/40 (35%), Positives = 15/40 (37%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PP+ PPPPP G PPPPP P Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 138 Score = 32.3 bits (70), Expect = 0.49 Identities = 14/40 (35%), Positives = 15/40 (37%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PP+ PPPPP G PPPPP P Sbjct: 130 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 169 Score = 31.9 bits (69), Expect = 0.65 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP+ PPPPP G PPPPP Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 68 Score = 31.9 bits (69), Expect = 0.65 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP+ PPPPP G PPPPP Sbjct: 161 PPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPP 193 Score = 31.9 bits (69), Expect = 0.65 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP+ PPPPP G PPPPP Sbjct: 192 PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPP 224 Score = 31.9 bits (69), Expect = 0.65 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP+ PPPPP G PPPPP Sbjct: 254 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 286 Score = 29.9 bits (64), Expect = 2.6 Identities = 24/85 (28%), Positives = 26/85 (30%) Frame = +2 Query: 488 KXPPPPXXXGXXXXXXXXXXXXXXXXSRGXGGEXXXXPPPGGEXXVLPXXXGXPPKXXFX 667 + PPPP G G G PPP P G PP Sbjct: 32 RPPPPPKGTGTPPPPPTGEPQDLS----GEGNASRRPPPP-------PKGTGTPP----- 75 Query: 668 PXPAQXPXNXKAXRGXLXXXPPPPP 742 P P P + A G PPPPP Sbjct: 76 PPPTGEPQDLSAEEGNASRRPPPPP 100 Score = 29.1 bits (62), Expect = 4.6 Identities = 13/40 (32%), Positives = 14/40 (35%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPPXXXKKKP 764 PP+ P PPP G PPPPP P Sbjct: 223 PPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 262 >Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein E02A10.2 protein. Length = 385 Score = 29.5 bits (63), Expect(2) = 0.67 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGGG 521 GGGGG PPPP GGG Sbjct: 43 GGGGGCGGGCAPPPPPPACGGG 64 Score = 29.5 bits (63), Expect = 3.5 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -1 Query: 505 GGGGXFXXGKXPPPPPP 455 GGGG G PPPPPP Sbjct: 43 GGGGGCGGGCAPPPPPP 59 Score = 29.5 bits (63), Expect = 3.5 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGGG 521 GGGGG PPPP GGG Sbjct: 100 GGGGGCGGGCAPPPPPPACGGG 121 Score = 29.5 bits (63), Expect = 3.5 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -1 Query: 505 GGGGXFXXGKXPPPPPP 455 GGGG G PPPPPP Sbjct: 100 GGGGGCGGGCAPPPPPP 116 Score = 21.0 bits (42), Expect(2) = 0.67 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = +3 Query: 450 PXGGGGGG 473 P GGGGGG Sbjct: 21 PSGGGGGG 28 >Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein F15B9.4 protein. Length = 1140 Score = 30.7 bits (66), Expect = 1.5 Identities = 14/35 (40%), Positives = 14/35 (40%) Frame = +3 Query: 639 GXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G P PPPPP P G PPPPP Sbjct: 511 GIAPMSTNAPPPPPMPGMAPLSTGA--PTPPPPPP 543 Score = 28.3 bits (60), Expect = 8.0 Identities = 11/24 (45%), Positives = 11/24 (45%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPPXG 449 PPP G PPPPPP G Sbjct: 522 PPPMPGMAPLSTGAPTPPPPPPVG 545 >U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform b protein. Length = 781 Score = 30.7 bits (66), Expect = 1.5 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPPPP P G PPPPP Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPP 657 >U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform a protein. Length = 607 Score = 30.7 bits (66), Expect = 1.5 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPPPP P G PPPPP Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPP 483 >Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein C33B4.3b protein. Length = 993 Score = 30.3 bits (65), Expect = 2.0 Identities = 14/33 (42%), Positives = 14/33 (42%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP PPPPP P G PPPPP Sbjct: 787 PPSTSSVPPPPP---PLPPISSGAPPPPPPPPP 816 >Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein C33B4.3a protein. Length = 1110 Score = 30.3 bits (65), Expect = 2.0 Identities = 14/33 (42%), Positives = 14/33 (42%) Frame = +3 Query: 645 PPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 PP PPPPP P G PPPPP Sbjct: 787 PPSTSSVPPPPP---PLPPISSGAPPPPPPPPP 816 >AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd related) protein19 protein. Length = 157 Score = 30.3 bits (65), Expect = 2.0 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGG 518 GGGGGG PPPP GG Sbjct: 34 GGGGGGGGCCAPPPPPPVCGG 54 >AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical protein D1007.7 protein. Length = 988 Score = 30.3 bits (65), Expect = 2.0 Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 4/52 (7%) Frame = +3 Query: 600 LPPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGG----XFXXXPPPPP 743 LPPG F+ PP PP PP P G F PPPP Sbjct: 694 LPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745 >Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein T24B8.4 protein. Length = 866 Score = 29.9 bits (64), Expect = 2.6 Identities = 16/48 (33%), Positives = 16/48 (33%) Frame = +3 Query: 600 LPPGGXXXFSXXXGXPPQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 LPPG PP PPPP P PPPPP Sbjct: 52 LPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99 >Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein W01B6.7 protein. Length = 301 Score = 29.9 bits (64), Expect = 2.6 Identities = 24/98 (24%), Positives = 24/98 (24%), Gaps = 2/98 (2%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGGGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGGXXXFSXX 635 GGGGGG P PP GG P Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC 150 Query: 636 XGXP--PQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G P P PP PP P G P PP Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188 >V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caenorhabditis elegansgene Col-2 coding for a collagen. ). Length = 301 Score = 29.9 bits (64), Expect = 2.6 Identities = 24/98 (24%), Positives = 24/98 (24%), Gaps = 2/98 (2%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGGGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGGXXXFSXX 635 GGGGGG P PP GG P Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC 150 Query: 636 XGXP--PQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G P P PP PP P G P PP Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188 >J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans (nematode)collagen 2 (col-2) gene, complete cds. ). Length = 301 Score = 29.9 bits (64), Expect = 2.6 Identities = 24/98 (24%), Positives = 24/98 (24%), Gaps = 2/98 (2%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGGGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGGXXXFSXX 635 GGGGGG P PP GG P Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC 150 Query: 636 XGXP--PQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G P P PP PP P G P PP Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188 >AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen structural gene, probabledorsal and ventral cuticle component, from embryo to adult,but maximal in dauer (28.0 kD) (col-2) protein. Length = 301 Score = 29.9 bits (64), Expect = 2.6 Identities = 24/98 (24%), Positives = 24/98 (24%), Gaps = 2/98 (2%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGGGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGGXXXFSXX 635 GGGGGG P PP GG P Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC 150 Query: 636 XGXP--PQKXXXPPPPPNXXXTPKXXGGXFXXXPPPPP 743 G P P PP PP P G P PP Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188 >AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical protein Y52B11A.5 protein. Length = 219 Score = 29.9 bits (64), Expect = 2.6 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -1 Query: 505 GGGGXFXXGKXPPPPPPXGXKXXXG 431 GG G + PPPPPP G K G Sbjct: 24 GGKGRPPPARPPPPPPPRGVKCPAG 48 >Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical protein T16G1.1 protein. Length = 695 Score = 29.5 bits (63), Expect = 3.5 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = -1 Query: 520 PPPXXGGGGXFXXGKXPPPPPP 455 PP G G G PPPPPP Sbjct: 520 PPSSSGSGSNRRSGPPPPPPPP 541 >AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical protein F59E12.9 protein. Length = 1621 Score = 29.1 bits (62), Expect = 4.6 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPP 743 PPPPP K G PPPPP Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPPPP 1381 Score = 28.3 bits (60), Expect = 8.0 Identities = 12/30 (40%), Positives = 12/30 (40%) Frame = +3 Query: 666 PPPPPNXXXTPKXXGGXFXXXPPPPPXXXK 755 PPPPP P PPPPP K Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSK 1367 >AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical protein Y53G8AR.9 protein. Length = 315 Score = 29.1 bits (62), Expect = 4.6 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +3 Query: 456 GGGGGGXXPXKKXPPPPXXGGG 521 G GG G + PPPP GGG Sbjct: 200 GSGGSGGGSGRFPPPPPPYGGG 221 Score = 28.3 bits (60), Expect = 8.0 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 Query: 502 GGGXFXXGKXPPPPPPXG 449 GG G+ PPPPPP G Sbjct: 202 GGSGGGSGRFPPPPPPYG 219 >AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical protein Y47D7A.13 protein. Length = 311 Score = 29.1 bits (62), Expect = 4.6 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +3 Query: 444 FXPXGGGGGGXXPXKKXPPPPXXGGG 521 F GGGGGG PPPP GGG Sbjct: 18 FNLLGGGGGGCC---APPPPPPCGGG 40 >AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical protein Y63D3A.5 protein. Length = 486 Score = 28.3 bits (60), Expect = 8.0 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 4/36 (11%) Frame = +3 Query: 645 PPQKXXXPP----PPPNXXXTPKXXGGXFXXXPPPP 740 PPQ PP PPP+ P+ GG PPPP Sbjct: 381 PPQSG--PPGAFAPPPSAFGAPQGPGGPGGYGPPPP 414 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.317 0.152 0.537 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,597,844 Number of Sequences: 27780 Number of extensions: 273095 Number of successful extensions: 2328 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 533 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1743 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2307803960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits)
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