Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N19
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical ... 99 2e-21
AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D prot... 100 3e-21
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 64 1e-10
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 64 1e-10
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 64 1e-10
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 64 1e-10
Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical pr... 59 4e-09
U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein. 59 4e-09
Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein. 52 5e-07
AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical ... 48 9e-06
AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b prot... 48 9e-06
AF026213-1|AAB71309.1| 130|Caenorhabditis elegans Hypothetical ... 36 0.039
U00055-11|AAN65307.1| 290|Caenorhabditis elegans Hypothetical p... 35 0.089
U00055-10|AAN65306.1| 181|Caenorhabditis elegans Hypothetical p... 35 0.089
U00055-9|AAL06042.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.089
U00055-8|AAL06043.1| 311|Caenorhabditis elegans Hypothetical pr... 35 0.089
AC006648-6|AAP68938.1| 123|Caenorhabditis elegans Cyclin a prot... 35 0.089
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.9
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 30 1.9
AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kin... 30 1.9
AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase p... 30 1.9
U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical pr... 29 4.4
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81077-6|CAB03069.1| 167|Caenorhabditis elegans Hypothetical pr... 28 7.7
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 28 7.7
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 28 7.7
>AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical
protein Y38F1A.5 protein.
Length = 405
Score = 99 bits (238), Expect = 2e-21
Identities = 47/137 (34%), Positives = 76/137 (55%)
Frame = +1
Query: 310 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV 489
EE +YF VQ ITP R +W+ +V ++ C +VF LA+S +DRF+S+ +
Sbjct: 83 EEALQPNYHYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSVQNI 142
Query: 490 GKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANSITLTDLCSWELLVLSKLKWDV 669
K +Q++ L +ASKL+ P + A + +Y+ NS + + WELL+++ L+W+
Sbjct: 143 LKHDIQMIAGVALFIASKLKAPH--PMTASKIAYYSDNSCPIDMILQWELLIVTTLQWET 200
Query: 670 AGVTAHDFLPLLLSRLP 720
TA F L SR+P
Sbjct: 201 ESPTAFSFFDFLASRIP 217
>AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D
protein.
Length = 405
Score = 99.5 bits (237), Expect = 3e-21
Identities = 47/137 (34%), Positives = 76/137 (55%)
Frame = +1
Query: 310 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV 489
EE +YF VQ ITP R +W+ +V ++ C +VF LA+S +DRF+S+ +
Sbjct: 83 EEALQPNYHYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSVQNI 142
Query: 490 GKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANSITLTDLCSWELLVLSKLKWDV 669
K +Q++ L +ASKL+ P + A + +Y+ NS + + WELL+++ L+W+
Sbjct: 143 LKHDIQMIAGVALFIASKLKAPH--PMTASKIAYYSDNSCPIDMILQWELLIVTTLQWET 200
Query: 670 AGVTAHDFLPLLLSRLP 720
TA F L SR+P
Sbjct: 201 ESPTAFSFFNFLASRIP 217
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +1
Query: 376 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 549
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 259 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 318
Query: 550 E--PGSCALPADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
E P C A L T ++ T ++ + E+L++ + W + +T+ +L L L
Sbjct: 319 EIYPPKCIDFAHL----TDSAFTCDNIRTMEVLIVKYIGWSLGPITSIQWLSTYLQLL 372
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +1
Query: 376 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 549
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 321
Query: 550 E--PGSCALPADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
E P C A L T ++ T ++ + E+L++ + W + +T+ +L L L
Sbjct: 322 EIYPPKCIDFAHL----TDSAFTCDNIRTMEVLIVKYIGWSLGPITSIQWLSTYLQLL 375
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +1
Query: 376 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 549
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 321
Query: 550 E--PGSCALPADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
E P C A L T ++ T ++ + E+L++ + W + +T+ +L L L
Sbjct: 322 EIYPPKCIDFAHL----TDSAFTCDNIRTMEVLIVKYIGWSLGPITSIQWLSTYLQLL 375
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +1
Query: 376 RRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAV--GKSQVQLLGTACLLLASKLR 549
RR++ +WM+EVCE E F LA+ ++DR+L V QL+GTA L +A+K
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 321
Query: 550 E--PGSCALPADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
E P C A L T ++ T ++ + E+L++ + W + +T+ +L L L
Sbjct: 322 EIYPPKCIDFAHL----TDSAFTCDNIRTMEVLIVKYIGWSLGPITSIQWLSTYLQLL 375
>Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical
protein ZK507.6 protein.
Length = 485
Score = 59.3 bits (137), Expect = 4e-09
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 349 VQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACL 528
+Q+++ MR ++ +W +V ++ Q+E F LA+S +DR LS+ + K + QL+GT +
Sbjct: 236 IQSQVNEEMRTILIDWFSDVVKEYNFQKETFHLAVSLVDRALSMFNIDKMRFQLVGTTSM 295
Query: 529 LLASKLREPGSCALPADL--LVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDF 693
++A K E P ++ T N+ + D+ E +L K + VA T+ F
Sbjct: 296 MIAVKYEE----IFPPEIEDFALITDNTYRVPDILLMERFLLGKFDFVVAMPTSSWF 348
>U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein.
Length = 485
Score = 59.3 bits (137), Expect = 4e-09
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 349 VQTEITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACL 528
+Q+++ MR ++ +W +V ++ Q+E F LA+S +DR LS+ + K + QL+GT +
Sbjct: 236 IQSQVNEEMRTILIDWFSDVVKEYNFQKETFHLAVSLVDRALSMFNIDKMRFQLVGTTSM 295
Query: 529 LLASKLREPGSCALPADL--LVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDF 693
++A K E P ++ T N+ + D+ E +L K + VA T+ F
Sbjct: 296 MIAVKYEE----IFPPEIEDFALITDNTYRVPDILLMERFLLGKFDFVVAMPTSSWF 348
>Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical
protein ZC168.4 protein.
Length = 361
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 358 EITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLA 537
E TP MRR++ +W+++V E L + LDR L K+ +QLLG + + +A
Sbjct: 104 EPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDRMLQKKVTSKADLQLLGISAMFVA 163
Query: 538 SKLREPGSCALPADL--LVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLL 705
SK E LP D+ F T N+ + + + E +L+ L +D++ ++ FL L
Sbjct: 164 SKFEE---VYLP-DIHDYEFITENTYSKKQILAMEQTILNSLNFDLSCPSSLVFLRCL 217
>U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein.
Length = 361
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 358 EITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLA 537
E TP MRR++ +W+++V E L + LDR L K+ +QLLG + + +A
Sbjct: 104 EPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDRMLQKKVTSKADLQLLGISAMFVA 163
Query: 538 SKLREPGSCALPADL--LVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLL 705
SK E LP D+ F T N+ + + + E +L+ L +D++ ++ FL L
Sbjct: 164 SKFEE---VYLP-DIHDYEFITENTYSKKQILAMEQTILNSLNFDLSCPSSLVFLRCL 217
>AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical
protein Y43E12A.1 protein.
Length = 317
Score = 48.0 bits (109), Expect = 9e-06
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +1
Query: 361 ITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLAS 540
+ MRR++ +W+++V E L I LDR + V K++ QLLG A L +AS
Sbjct: 58 VNSKMRRILVDWLIQVHLRFHLTPETLHLTIFVLDRIIVKNIVSKAEFQLLGVAALFVAS 117
Query: 541 KLREPGSCALPADLLVF--YTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFL 696
K + LP D+L + T N+ + + + E +L+ L +D++ ++ FL
Sbjct: 118 KFED---IYLP-DILEYEMITDNTFSKKQIMAMEQTILNALNFDLSCPSSLVFL 167
>AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b protein
2.2 protein.
Length = 339
Score = 48.0 bits (109), Expect = 9e-06
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +1
Query: 361 ITPHMRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLAS 540
+ MRR++ +W+++V E L I LDR + V K++ QLLG A L +AS
Sbjct: 80 VNSKMRRILVDWLVQVHLRFHLTPETLHLTIFVLDRIIVKNIVSKAEFQLLGVAALFVAS 139
Query: 541 KLREPGSCALPADLLVF--YTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFL 696
K + LP D+L + T N+ + + + E +L+ L +D++ ++ FL
Sbjct: 140 KFED---IYLP-DILEYELITENTFSKKQILAMEQTILNALNFDLSCPSSLVFL 189
>AF026213-1|AAB71309.1| 130|Caenorhabditis elegans Hypothetical
protein F08F1.9 protein.
Length = 130
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 373 MRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLRE 552
MR ++ +W + + + E LA+S +DR L + + K + QL+G + +A K E
Sbjct: 1 MRTILIDWFSDAVREYIFRNEAVHLAVSLVDRALPMFNINKMRFQLVGITSMRIAVKYEE 60
>U00055-11|AAN65307.1| 290|Caenorhabditis elegans Hypothetical
protein R02F2.1d protein.
Length = 290
Score = 34.7 bits (76), Expect = 0.089
Identities = 28/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 394 WMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALP 573
WM + G + + LA+S DR ++ + V + L +A KL E P
Sbjct: 47 WMCAAAKRIGLEMDAASLAVSIFDRVVTSVKIPGKYVNCVAVGSLSIAKKLCEDHEEDAP 106
Query: 574 ADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
L S +L E+ +L L+WD + F+ LLS L
Sbjct: 107 VFLGRLRLEYSAQ--ELKRMEIKILEVLRWDAHLPNLNRFVECLLSEL 152
>U00055-10|AAN65306.1| 181|Caenorhabditis elegans Hypothetical
protein R02F2.1c protein.
Length = 181
Score = 34.7 bits (76), Expect = 0.089
Identities = 28/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 394 WMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALP 573
WM + G + + LA+S DR ++ + V + L +A KL E P
Sbjct: 66 WMCAAAKRIGLEMDAASLAVSIFDRVVTSVKIPGKYVNCVAVGSLSIAKKLCEDHEEDAP 125
Query: 574 ADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
L S +L E+ +L L+WD + F+ LLS L
Sbjct: 126 VFLGRLRLEYSAQ--ELKRMEIKILEVLRWDAHLPNLNRFVECLLSEL 171
>U00055-9|AAL06042.1| 309|Caenorhabditis elegans Hypothetical
protein R02F2.1a protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.089
Identities = 28/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 394 WMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALP 573
WM + G + + LA+S DR ++ + V + L +A KL E P
Sbjct: 66 WMCAAAKRIGLEMDAASLAVSIFDRVVTSVKIPGKYVNCVAVGSLSIAKKLCEDHEEDAP 125
Query: 574 ADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
L S +L E+ +L L+WD + F+ LLS L
Sbjct: 126 VFLGRLRLEYSAQ--ELKRMEIKILEVLRWDAHLPNLNRFVECLLSEL 171
>U00055-8|AAL06043.1| 311|Caenorhabditis elegans Hypothetical
protein R02F2.1b protein.
Length = 311
Score = 34.7 bits (76), Expect = 0.089
Identities = 28/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 394 WMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALP 573
WM + G + + LA+S DR ++ + V + L +A KL E P
Sbjct: 66 WMCAAAKRIGLEMDAASLAVSIFDRVVTSVKIPGKYVNCVAVGSLSIAKKLCEDHEEDAP 125
Query: 574 ADLLVFYTANSITLTDLCSWELLVLSKLKWDVAGVTAHDFLPLLLSRL 717
L S +L E+ +L L+WD + F+ LLS L
Sbjct: 126 VFLGRLRLEYSAQ--ELKRMEIKILEVLRWDAHLPNLNRFVECLLSEL 171
>AC006648-6|AAP68938.1| 123|Caenorhabditis elegans Cyclin a protein
2 protein.
Length = 123
Score = 34.7 bits (76), Expect = 0.089
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 373 MRRLVAEWMLEVCEDRGCQEEVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLRE 552
MR ++ +W + + ++E LA S +DR L + + K + QL+G + +A K E
Sbjct: 1 MRTILIDWFSDAVREYISRKEAVHLAASLVDRALPMFNIDKMRFQLVGITSMRIAVKYEE 60
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2
Query: 590 KTSRSAGRAHDPGSRSLEANSRQAVPKSCT*LFPT---AQMLKNRSRNDIASGKTSSWQP 420
+ SRS R+ + + + SR A S + F + + + RSR+D +SG S +
Sbjct: 234 RKSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSESEHET 293
Query: 419 RSSH 408
RSSH
Sbjct: 294 RSSH 297
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2
Query: 590 KTSRSAGRAHDPGSRSLEANSRQAVPKSCT*LFPT---AQMLKNRSRNDIASGKTSSWQP 420
+ SRS R+ + + + SR A S + F + + + RSR+D +SG S +
Sbjct: 234 RKSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSESEHET 293
Query: 419 RSSH 408
RSSH
Sbjct: 294 RSSH 297
>AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kinase
2 protein.
Length = 632
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 681 SARLLASSAIAVA-DPRPCQRGNGAKACKDXYFTSG 785
SA AS I V DP P +R N C+D +F SG
Sbjct: 255 SASAAASQLIRVLLDPVPSRRPNARAVCRDHFFKSG 290
>AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase
protein 2 protein.
Length = 632
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 681 SARLLASSAIAVA-DPRPCQRGNGAKACKDXYFTSG 785
SA AS I V DP P +R N C+D +F SG
Sbjct: 255 SASAAASQLIRVLLDPVPSRRPNARAVCRDHFFKSG 290
>U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical
protein T12C9.7 protein.
Length = 419
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 433 EVFPLAISFLDRFLSICAVGKSQVQLLGTACLLLASKLREPGSCALPADLLVFYTANSIT 612
E L + LD+ L + +V K+ + L L++ASKL E +C L + ++ +
Sbjct: 179 EALHLGAALLDKCLDMMSVNKASLDELAAVTLVIASKL-EDVNC-LTIENIIGVELIEKS 236
Query: 613 LTDLCSWELLVLSKLKWDVAGVTAHDFLPLLL 708
+ + E VL+ L + + T F +L
Sbjct: 237 AAQMAALERFVLTSLSFKITIPTPLHFSTYML 268
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = -2
Query: 581 RSAGRAHDPGSRSLEANSRQAVPKSCT*LFPTAQMLKNRSRNDIASGKTSSWQPRSSHTS 402
RS R+ GS+S ++SR +V T +++ ++RSR SG SS + RS
Sbjct: 98 RSVVRSVSRGSKSRRSSSRGSV-YGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRR 156
Query: 401 SIHSATRRR 375
S +RRR
Sbjct: 157 SSRRRSRRR 165
>Z81077-6|CAB03069.1| 167|Caenorhabditis elegans Hypothetical
protein F36A2.7 protein.
Length = 167
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 488 WEKVKCNFWAQPVYCWLPNSVSQDRV 565
WE+++ N+W +P + P V+ R+
Sbjct: 122 WERIRNNYWKKPTLVFDPTGVTHQRL 147
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 541 WKPTVDRLCPKVALDFFPPRRCSRTDPGTISPVERL 434
W P V CP V + +R R+DP T+ + ++
Sbjct: 99 WTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKM 134
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 541 WKPTVDRLCPKVALDFFPPRRCSRTDPGTISPVERL 434
W P V CP V + +R R+DP T+ + ++
Sbjct: 99 WTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKM 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,610,692
Number of Sequences: 27780
Number of extensions: 376635
Number of successful extensions: 1234
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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