Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N17
(972 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 54 2e-07
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 54 2e-07
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 50 2e-06
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 50 3e-06
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 50 3e-06
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 47 2e-05
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 44 2e-04
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 43 4e-04
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 43 4e-04
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 43 4e-04
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 42 7e-04
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 36 0.044
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 31 1.2
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 31 1.6
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 31 1.6
AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical... 31 1.6
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 6.6
U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine rece... 29 6.6
Z81527-3|CAB04271.1| 296|Caenorhabditis elegans Hypothetical pr... 28 8.7
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 28 8.7
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Frame = +3
Query: 270 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLRDVSHS 443
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + + D+++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100
Query: 444 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
+ LL F Y GE+ + + S + A Q+
Sbjct: 101 TVDALLSFAYTGELRITTSNVQSIMLGANFFQM 133
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 276 GLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLRDVSHSAL 449
GL +R L DVTL + + AH++VLS CSPYF MF +M + + ++ L
Sbjct: 48 GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107
Query: 450 RDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
L++F Y G + + + + A LQ+
Sbjct: 108 EALIEFCYTGAIAIDDSNVQDILPAACLLQI 138
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = +3
Query: 270 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLR----DVS 437
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + D++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100
Query: 438 HSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
+ + LL F Y GE+ + + S + A Q+
Sbjct: 101 YETVDALLSFAYTGELRITTSNVQSIMLGANFFQM 135
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLRDVSHSALRDLLQF 467
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 468 MYQGEVNVKQEELASFISTAEQLQV 542
+Y ++ + + I TA LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLRDVSHSALRDLLQF 467
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 468 MYQGEVNVKQEELASFISTAEQLQV 542
+Y ++ + + I TA LQ+
Sbjct: 169 IYTDKIAITMNNVHQLIFTATVLQM 193
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 252 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 425
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 246
Query: 426 RDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 551
RD+ + ++ +L ++Y G ++ AE+ + GL
Sbjct: 247 RDIDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPGL 288
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 252 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 425
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 253
Query: 426 RDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 551
RD+ + ++ +L ++Y G ++ AE+ + GL
Sbjct: 254 RDIDYEVVQAILYYIYTGTCTNMGGNALDILAAAERFALPGL 295
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +3
Query: 333 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLRDVSHSALRDLLQFMYQGEVNVKQEEL 506
+ AH+++LS S YF+ MF + + I+ +++V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 507 ASFISTAEQLQV 542
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +3
Query: 333 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLRDVSHSALRDLLQFMYQGEVNVKQEEL 506
+ AH+++LS S YF+ MF + + I+ +++V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 507 ASFISTAEQLQV 542
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 195 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 374
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 375 FQEMFKMNPT---QHPIVFLRDVSHSALRDLLQFMYQGEVNVKQEELASFISTA 527
F M T + ++++ D+ + + +++ ++Y G N ++A+ + A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 195 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 374
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 375 FQEMFKMNPT---QHPIVFLRDVSHSALRDLLQFMYQGEVNVKQEELASFISTA 527
F M T + ++++ D+ + + +++ ++Y G N ++A+ + A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 297 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN---PTQHPIVFLRDVSHSALRDLLQF 467
L DV L EG+ + K VL+ S +FQ+MF N TQ I + DV+HS DLL
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIK-IDDVTHSEFIDLLNV 217
Query: 468 MYQGEVNVKQEELASFISTAEQLQV 542
+Y + + ++ + +++ V
Sbjct: 218 IYPTHMLINSSNVSHLLKLSDRFAV 242
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Frame = +3
Query: 198 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 356
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 357 SVCSPYFQEMFKMNPTQHPIVFLRDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 536
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120
Query: 537 QV 542
+
Sbjct: 121 LI 122
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Frame = +3
Query: 198 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 356
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 357 SVCSPYFQEMFKMNPTQHPIVFLRDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 536
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120
Query: 537 QV 542
+
Sbjct: 121 LI 122
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Frame = +3
Query: 198 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 356
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 357 SVCSPYFQEMFKMNPTQHPIVFLRDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 536
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNF 120
Query: 537 QV 542
+
Sbjct: 121 LI 122
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 41.9 bits (94), Expect = 7e-04
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +3
Query: 333 LQAHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLRDVSHSALRDLLQFMYQGEVNVKQ 497
+ AHK VLS+ S F MF + P T+ + + L DV SA LL+F+Y EV ++
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263
Query: 498 EELASFISTAEQLQVKGL 551
E + + + TA++ V +
Sbjct: 264 ESVMTTLYTAKKYAVPAM 281
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 36.3 bits (80), Expect = 0.033
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +3
Query: 303 DVTLAAEGRLLQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLRDVSHSALRDLLQFMY 473
D + + ++AH+ +L SP F+ MF M Q + + D + ++R +++FMY
Sbjct: 220 DCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMY 279
Query: 474 QG--EVNVKQEELASFISTAEQLQV 542
G E Q + ++ A++ +V
Sbjct: 280 TGATESLESQGNIDEILAIADKYEV 304
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 35.9 bits (79), Expect = 0.044
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = +3
Query: 303 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLRDVSHSALRDLLQFMYQGE 482
DV + + H +V+ S F E F + + D ++R + +MY GE
Sbjct: 36 DVKIQLKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGE 95
Query: 483 VNVKQEELASFISTAEQLQV 542
+++ + +A ++ A L+V
Sbjct: 96 IDIPETTIADVLAVASYLRV 115
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +3
Query: 270 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----KMNPTQHPI-VFLRD 431
+ L +G+ D+ LAA GR + HKL L + +F+ MF + N + + + +
Sbjct: 60 YQKLFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMFDGLWTESNSGRVQMEITDPN 118
Query: 432 VSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNE 569
+ L +L +Y E+ + +++ ++ A + + +T +E
Sbjct: 119 IDADGLNSVLGSLYHNEIEIDLDKIEGTVAAASYIVLDSVTDRCSE 164
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFLRDVSHSALRDLLQF 467
++ D+TL + L +K L++ SP F MF N + V L DV R+LL
Sbjct: 226 NICDMTLVINKQKLFVNKAYLALYSPVFYAMFFSNFQEREKTQVELEDVVLEEFRELLHV 285
Query: 468 MYQGEVNVKQEELASFISTAEQLQVK 545
+Y + + + + ++ +++
Sbjct: 286 IYPCHKPITSDNVEYLLELGDKYEIQ 311
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 264 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 392
A + + S + D L E + L +K LS+ S YF E+FK
Sbjct: 98 AEYEKMFSESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFK 140
>AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical
protein Y54F10AM.11 protein.
Length = 286
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +3
Query: 264 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLRDVSHS 443
AG + + + D + E R K L+ S FQ +F P P + ++DVS
Sbjct: 2 AGMDFSMPKELVFDAIVVVEERKFHVGKQYLATHSRVFQSLFA-TPGD-PEITIQDVSSE 59
Query: 444 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 542
L+FMY + + + S ++ + + V
Sbjct: 60 DFLKFLEFMYHNTDQITAQNVESLLTVSARFGV 92
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +3
Query: 294 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----KMNPTQHPIVFLRDVSHSALRDL 458
D +V L E H VLS+ S YF+ +F + + PI L+ +S + R+L
Sbjct: 123 DSSNVVLKVEDEEFHVHTFVLSMASQYFKVLFNGSFIESSDLTKPIE-LKGISSCSFRNL 181
Query: 459 LQFMY 473
L +Y
Sbjct: 182 LNCIY 186
>U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine
receptor, class v protein31 protein.
Length = 324
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 639 IVFVVTTWGLASKSALVWMAWNFLHF 562
++F TTWGL +K + M + + HF
Sbjct: 59 MIFYTTTWGLRTKPGIREMLYTYQHF 84
>Z81527-3|CAB04271.1| 296|Caenorhabditis elegans Hypothetical
protein F35E12.3 protein.
Length = 296
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 18 LHYREFLK--IYGSDQEHHSNGEDVLQKCVKCSVGNIELYFFQMF 146
L Y EF + G +Q H ++C+KCS NI + FF F
Sbjct: 174 LEYIEFFECDFAGYEQLVHLEQWKKAERCIKCSELNIPMEFFLQF 218
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 477 GEVNVKQEELASFISTAEQLQVKGLTGNQ 563
G K EE+ +I ++++ +GLTGNQ
Sbjct: 650 GPTKQKLEEVLDYIGCSQKINYQGLTGNQ 678
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 324 GRLLQAHKLVLSVCSPYFQ---EMFKMNPTQHPIVFLRDVSHSALRDLLQFMYQGEVNVK 494
G+ K L+ YF+ E+ ++NPT PI R H +L FM G+V++
Sbjct: 8 GKEFVTSKATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMRDGDVDLP 64
Query: 495 QEELASFISTA 527
QE L + A
Sbjct: 65 QEYLNQLLREA 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,741,783
Number of Sequences: 27780
Number of extensions: 296229
Number of successful extensions: 642
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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