Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N16
         (838 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    25   3.8  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    25   3.8  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    25   3.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.7  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 674 VWSKFELLSFCPIQQLKYQPSMSHGSCNRALG 579
           +W   E +SFC  +++    S  HG CN   G
Sbjct: 105 LWPPAERISFCYTERMGLDGSTGHG-CNAKSG 135


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2

Query: 233 SLLPTTSKMATSVINTYSDPCLPEWMSAPH 322
           +++ + S+  ++V+N+Y+    P W  AP+
Sbjct: 100 TVVSSISRSRSTVVNSYNLTTCPSWAHAPN 129


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2

Query: 233 SLLPTTSKMATSVINTYSDPCLPEWMSAPH 322
           +++ + S+  ++V+N+Y+    P W  AP+
Sbjct: 100 TVVSSISRSRSTVVNSYNLTTCPSWAHAPN 129


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 455 YCCRSGSAADTQAIADIVTYH 517
           Y CRS   A +     I+TYH
Sbjct: 550 YMCRSNPPAQSDHNGKIITYH 570


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,179
Number of Sequences: 2352
Number of extensions: 17082
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)