Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N15
(902 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0006 + 7274148-7274986,7275636-7277586 36 0.058
03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690... 33 0.31
08_01_1086 - 11150017-11151564 30 2.9
12_01_0171 - 1268803-1269500,1271491-1271567,1271941-1272065,127... 29 3.8
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 3.8
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 29 6.7
02_02_0537 + 11308195-11309667 29 6.7
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 28 8.8
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 28 8.8
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 28 8.8
07_03_1210 + 24903389-24903695,24904383-24904468,24904545-249046... 28 8.8
01_05_0645 - 23899579-23904483 28 8.8
>11_02_0006 + 7274148-7274986,7275636-7277586
Length = 929
Score = 35.5 bits (78), Expect = 0.058
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 412 QDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKE-SHSENSGTS 588
++ H +I T KS G DE V Q K +D+ NL+ + S ENS +
Sbjct: 303 KNNHASRIIT--TTRIKSVGQFCCTSDEGFVYQMKPLTKSDSENLFLKRTFSSEENSPSQ 360
Query: 589 TQDTVXKIIYVQTDGL 636
Q+ + KI+Y + DGL
Sbjct: 361 LQEVINKILY-KCDGL 375
>03_06_0517 +
34466743-34466879,34468478-34468588,34468997-34469079,
34469287-34469404,34469503-34469714,34470167-34470651,
34470731-34470801,34470898-34470955,34471161-34471192,
34471193-34471449,34471820-34471974,34472353-34472636,
34472725-34472842,34473574-34473756,34473848-34474162
Length = 872
Score = 33.1 bits (72), Expect = 0.31
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = +1
Query: 307 RNHKVPHDLRNVENPSQRPEHRDPQDYSALNE--RKSQDKHTENLIPNLTNSHKSYGYTG 480
R+H HD + + H + QD +NE ++SQ + T + +S K
Sbjct: 182 RSHPDVHDSSIAKKAASEESHPNIQDKPVVNESSKESQSRSTNDSTTRGVDSMKH----- 236
Query: 481 IDKDESIVSQDKVAFTNDNGNLYQSKESHSENSGTSTQDTVXKIIYVQTDGLQDNQLYQV 660
K+E + S+ +N ++ + S + +S T +VQ LQ ++
Sbjct: 237 ASKEEPVESKPNSTRGQENMDVLNNLNSTDAGNNSSLSTTTENASHVQRRLLQTDEKSNQ 296
Query: 661 AGSS 672
AGSS
Sbjct: 297 AGSS 300
>08_01_1086 - 11150017-11151564
Length = 515
Score = 29.9 bits (64), Expect = 2.9
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +1
Query: 361 PEHRDPQ-DYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 525
P H D DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 86 PHHEDRLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISADPASSMVAF 141
Query: 526 TNDNGNLYQSKESHSENSGTSTQDTVXKIIYV 621
+ NL QS + +S T DT+ + Y+
Sbjct: 142 HININNLLQSFPHNKPSSSTKRHDTIPQTPYI 173
>12_01_0171 -
1268803-1269500,1271491-1271567,1271941-1272065,
1272146-1272234,1272851-1272936,1273509-1273765
Length = 443
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 370 RDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 534
++PQ AL+E D +EN + L++S + T D +E + + D N+
Sbjct: 264 QEPQVVPALHEEPQDDDRSENAVQELSSSEAN---TSSDNNEPLAADDSAECMNE 315
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = +1
Query: 301 ERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNL 447
ER++ K DL++++ ++ E + +D S ++E + + + +LIP L
Sbjct: 393 ERKDVKYREDLKHLKQKIKKLEDKTEKDTSKIDESTKEVEESSSLIPQL 441
>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 421 HTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDN--GNLYQSKESHSENS-GTST 591
H ++LIP L + S + + ++ +D A N N NL+ + +++
Sbjct: 1107 HVQSLIPTLYSRQPSLRHLAVSTLRHLIERDPAAMINQNIEENLFSMLDEETDSEIAALV 1166
Query: 592 QDTVXKIIY 618
+ T+ +++Y
Sbjct: 1167 RSTIIRLLY 1175
>02_02_0537 + 11308195-11309667
Length = 490
Score = 28.7 bits (61), Expect = 6.7
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Frame = +1
Query: 319 VPHDLRNVENPSQR---PEHRDPQ-DYSALNERKSQDKHTENLIPNLTNSHKSYGYTGID 486
VP D + E ++ P H + DY R QDK L + S + T +
Sbjct: 69 VPSDQKITEKRAKLQDIPHHEERLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVF 124
Query: 487 KDESIVSQDK----VAFTNDNGNLYQSKESHSENSGTSTQDTVXKIIYV 621
D+ ++S D VAF + NL QS + +S T DT+ + Y+
Sbjct: 125 SDKILISTDPASSMVAFHININNLLQSFPHNKPSSSTKRHDTIPQTPYI 173
>11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 394 LNERKSQDKHTENLIP-NLTNSHKSYGYTGIDKDESIVSQDK----VAFTNDNGNLYQSK 558
L+ R+ + + ++++P + S + T + D+ ++S D VAF + NL QS
Sbjct: 1083 LDYREEKSRDGQDILPMEVEQSMATDKNTKVFSDKILISADPASSMVAFHININNLLQSF 1142
Query: 559 ESHSENSGTSTQDTVXKIIYV 621
+ +S T DT+ + Y+
Sbjct: 1143 PHNKPSSSTKRHDTIPQTPYI 1163
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 28.3 bits (60), Expect = 8.8
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +1
Query: 361 PEHRDPQ-DYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 525
P H + DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 687 PHHEERLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISADPASSMVAF 742
Query: 526 TNDNGNLYQSKESHSENSGTSTQDTVXKIIYV 621
+ NL QS + +S T DT+ + Y+
Sbjct: 743 HININNLLQSFPHNKPSSSTKRHDTIPQTPYI 774
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 28.3 bits (60), Expect = 8.8
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +1
Query: 361 PEHRDPQ-DYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 525
P H + DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 928 PHHEERLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISTDPASSMVAF 983
Query: 526 TNDNGNLYQSKESHSENSGTSTQDTVXKIIYV 621
+ NL QS + +S T DT+ + Y+
Sbjct: 984 HININNLLQSFPHNKPSSSTKRHDTIPQTPYI 1015
>07_03_1210 +
24903389-24903695,24904383-24904468,24904545-24904649,
24904737-24905531,24905719-24905941,24906318-24906712
Length = 636
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 322 PHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHT 426
P +L +VE P R Q+ +A+ S+DK T
Sbjct: 552 PDNLTSVERPDSRNSAMSDQELAAIQTNSSEDKQT 586
>01_05_0645 - 23899579-23904483
Length = 1634
Score = 28.3 bits (60), Expect = 8.8
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +1
Query: 361 PEHRDPQ-DYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK----VAF 525
P H + DY R QDK L + S + T + D+ ++S D VAF
Sbjct: 1205 PHHEEMLLDYREEKSRDGQDK----LPMEVEQSMATDKNTKVFSDKILISTDPASSMVAF 1260
Query: 526 TNDNGNLYQSKESHSENSGTSTQDTVXKIIYV 621
+ NL QS + +S T DT+ + Y+
Sbjct: 1261 HININNLLQSFPHNKPSSSTKRHDTIPQTPYI 1292
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,531,044
Number of Sequences: 37544
Number of extensions: 400913
Number of successful extensions: 797
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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