Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N14
         (1463 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1543|AAN10677.2| 1019|Drosophila melanogaster CG18405-P...    31   5.3  

>AE014134-1543|AAN10677.2| 1019|Drosophila melanogaster CG18405-PB,
            isoform B protein.
          Length = 1019

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -1

Query: 638  PPPXPXXFFFXPPPXXPPXFFFFXXKKIXXKXXGGGGXXP 519
            PPP         PP  PP  F F  +++      GGG  P
Sbjct: 906  PPPYDTPHLIASPPLPPPRRFRFGNRELFSMSPAGGGATP 945


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.153    0.498 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,428,393
Number of Sequences: 53049
Number of extensions: 202960
Number of successful extensions: 1186
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8107702344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)