Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N13
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    27   0.31 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   5.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.7  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   8.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   8.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   8.8  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 204 LSNPFLQNNQPFLKYGMWNENYL*NESNVMIKQNLQ*IYMNL 79
           LSN  + NN  + KY   N NY  N  N     N + +Y N+
Sbjct: 318 LSNKTIHNNNNY-KYNYNNNNYNNNNYNNNYNNNCKKLYYNI 358


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 66  FSSSVSSCKFTVNFA*SLHYSHFINN 143
           ++ S   C +TV+ A   + SHFIN+
Sbjct: 555 YNESEEQCPYTVDAAIYGNISHFINH 580


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 189 LQNNQPFLKYGMWNENYL*NESNVMIKQNLQ*IYMN 82
           L NN  +  Y  +N NY  N  N     N + +Y N
Sbjct: 85  LSNNYKYSNYNNYNNNYN-NNYNNNYNNNYKKLYKN 119


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 189 LQNNQPFLKYGMWNENYL*NESNVMIKQNLQ*IYMN 82
           L NN  +  Y  +N NY  N  N     N + +Y N
Sbjct: 85  LSNNYKYSNYNNYNNNYN-NNYNNNYNNNYKKLYKN 119


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 189 LQNNQPFLKYGMWNENY-L*NESNVMIKQNLQ*IYMNLH 76
           L NN  +  Y  +N NY   N  N     N + +Y N++
Sbjct: 318 LSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNIN 356


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 160 ILEKWLVILKKWVGEN 207
           ++E W+ +L  W+ EN
Sbjct: 498 LIEHWMPLLPNWILEN 513


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 422 DAL*SYFPSKVYFDMV 469
           D + SYF  K+YF+++
Sbjct: 104 DTISSYFVGKMYFNLI 119


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 422 DAL*SYFPSKVYFDMV 469
           D + SYF  K+YF+++
Sbjct: 109 DTISSYFVGKMYFNLI 124


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 422 DAL*SYFPSKVYFDMV 469
           D + SYF  K+YF+++
Sbjct: 109 DTISSYFVGKMYFNLI 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,413
Number of Sequences: 438
Number of extensions: 4603
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)