Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N11
         (1182 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060415-1|AAL25454.1|  463|Drosophila melanogaster LD37240p pro...    30   7.1  
AL009195-3|CAA15702.1|  463|Drosophila melanogaster EG:30B8.5,FB...    30   7.1  
AE014298-367|AAF45758.1|  463|Drosophila melanogaster CG3218-PA ...    30   7.1  

>AY060415-1|AAL25454.1|  463|Drosophila melanogaster LD37240p protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 18/56 (32%), Positives = 20/56 (35%)
 Frame = +1

Query: 880  PVGSXXRXPXGPRXXXXYSXLPQXDXPPXXVXGLRAAXPXRXGSAPPXPSTXLSXR 1047
            P+G     P GP         PQ   PP  V G+R   P      PP P   L  R
Sbjct: 240  PMGPMGPGPRGPGPMGPGGPYPQMPFPPP-VPGMRGPGPMGPMGGPPPPPPPLFMR 294


>AL009195-3|CAA15702.1|  463|Drosophila melanogaster
            EG:30B8.5,FBgn0000810;fs(1)K10 protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 18/56 (32%), Positives = 20/56 (35%)
 Frame = +1

Query: 880  PVGSXXRXPXGPRXXXXYSXLPQXDXPPXXVXGLRAAXPXRXGSAPPXPSTXLSXR 1047
            P+G     P GP         PQ   PP  V G+R   P      PP P   L  R
Sbjct: 240  PMGPMGPGPRGPGPMGPGGPYPQMPFPPP-VPGMRGPGPMGPMGGPPPPPPPLFMR 294


>AE014298-367|AAF45758.1|  463|Drosophila melanogaster CG3218-PA
            protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 18/56 (32%), Positives = 20/56 (35%)
 Frame = +1

Query: 880  PVGSXXRXPXGPRXXXXYSXLPQXDXPPXXVXGLRAAXPXRXGSAPPXPSTXLSXR 1047
            P+G     P GP         PQ   PP  V G+R   P      PP P   L  R
Sbjct: 240  PMGPMGPGPRGPGPMGPGGPYPQMPFPPP-VPGMRGPGPMGPMGGPPPPPPPLFMR 294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,324,441
Number of Sequences: 53049
Number of extensions: 115295
Number of successful extensions: 79
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6270829278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)