Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N10
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.3  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 11/57 (19%)
 Frame = -2

Query: 813 RSLKNGY-LSHVLII---FEINNYVPMSKQM-------FLLKLYLRTCFITYLNHTC 676
           R LK  Y LSH L I   ++  N+V +S +        FLL   L TC+I Y+   C
Sbjct: 11  RFLKVMYKLSHFLSITPNYDFENFVIISPRCDKISAICFLLSTILGTCWIIYVRIYC 67


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
 Frame = -3

Query: 293 CAALVNPFACKCAD---IYICALDL 228
           C  LVN F+C C      YIC +++
Sbjct: 237 CHDLVNSFSCSCPSGTLGYICEINV 261


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 516 WQALADGARRYQVCG 560
           W  L +GA ++ +CG
Sbjct: 315 WSFLQEGANKFVICG 329


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 447 VGWYIYRLIIGLVCVTIMRQVVVW 518
           V + I   +I ++CV +  + +VW
Sbjct: 250 VSFLIITQVIFVICVLVQSEKIVW 273


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 686 FRYVIKQVRKYSFNKNICLLIG 751
           F Y  K +R  SF   IC + G
Sbjct: 4   FNYSKKDIRSLSFFYKICNIFG 25


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 686 FRYVIKQVRKYSFNKNICLLIG 751
           F Y  K +R  SF   IC + G
Sbjct: 4   FNYSKKDIRSLSFFYKICNIFG 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,409
Number of Sequences: 336
Number of extensions: 3774
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)