Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N10
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1029 + 10547341-10548108                                         35   0.071
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141...    29   4.7  
09_03_0067 - 12035991-12036389,12036928-12037071,12037917-120379...    29   6.2  
05_03_0367 + 13124881-13125489,13125543-13126310                       29   6.2  

>12_01_1029 + 10547341-10548108
          Length = 255

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +3

Query: 144 LRCRQWRPPRGPLHSAEGLGHSRSKVQRKIERAYVNIGTFTSE-RVHQSGALTHRCAG 314
           LRCR+W     P+H   G G  R+   R++ER     G F ++ R  + G L HR  G
Sbjct: 45  LRCRRWWRCGRPVHGRGGTG-GRTTPARRMERFAAMCGGFRAKPRGGRGGGLRHRAEG 101


>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
            1414639-1414725,1416244-1416411,1416785-1416958,
            1417662-1417720,1418132-1420154,1420549-1420647,
            1420998-1421796,1422101-1422120,1422446-1422513
          Length = 1827

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 118  RALGRRLRRCGVASGGLLVAHSTQLRA 198
            R +GRRLR C   S   LVA +T+L++
Sbjct: 1073 RGIGRRLRSCCFGSSDSLVASATRLKS 1099


>09_03_0067 -
           12035991-12036389,12036928-12037071,12037917-12037946,
           12039881-12040159
          Length = 283

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 333 LQFPNEKCRTNSGFITRHGCVVRDTVAARLPPSSHYHTV 449
           LQ  +  C   SGF+TR GC      AA    SS + TV
Sbjct: 154 LQPGDFNCSVLSGFVTRPGCSPLPAFAAAAGKSSSHRTV 192


>05_03_0367 + 13124881-13125489,13125543-13126310
          Length = 458

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -3

Query: 290 AALVNPFACKCADIYICALDLALNFRSAVPEALS*VEWATRRPP 159
           AA      C C D+     D+   + +  PE      W TRR P
Sbjct: 200 AADTGVLCCSCDDVLSGGYDVEFRYLALPPECRLDANWTTRRQP 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,351,776
Number of Sequences: 37544
Number of extensions: 445113
Number of successful extensions: 1217
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)