Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N10
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ266432-1|ABB73038.1|  389|Homo sapiens FHL2 isoform 5 protein.       31   4.0  
AK097954-1|BAC05204.1|  123|Homo sapiens protein ( Homo sapiens ...    30   9.2  

>DQ266432-1|ABB73038.1|  389|Homo sapiens FHL2 isoform 5 protein.
          Length = 389

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 LRCRQWRPPRGPLHSAEGLGHSRSKV 221
           LRCR++  P  P   AEGL H  S+V
Sbjct: 40  LRCREYLQPPAPRREAEGLSHQGSEV 65


>AK097954-1|BAC05204.1|  123|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40635 fis, clone THYMU2015825. ).
          Length = 123

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 431 GGRQSSGDRVAHHTPVSSDEPGVRST 354
           GGR  SG R+ H TP  + EPG+ ST
Sbjct: 90  GGRGCSGLRLCHCTPAWATEPGLVST 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,496,906
Number of Sequences: 237096
Number of extensions: 2288664
Number of successful extensions: 5044
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5044
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)