Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N08
(874 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 204 2e-51
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 80 6e-14
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 7e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 58 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.012
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.020
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 36 1.3
UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.1
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 35 3.1
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a ... 33 7.2
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.2
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 33 7.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 204 bits (498), Expect = 2e-51
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = +2
Query: 503 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 682
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 683 AVGISVRCRSFAPSWAVCTXPPFSPTAAPYPV 778
AVGISVRCRSFAPSWAVCT PPFSPTAAPYPV
Sbjct: 84 AVGISVRCRSFAPSWAVCTNPPFSPTAAPYPV 115
Score = 33.1 bits (72), Expect = 9.5
Identities = 42/132 (31%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Frame = +1
Query: 436 SKRPGTVKRPRCWRFSIGSAPLXEHHK---NRRSSQRWRNPTGL*RYQAFPPGSSLVRSP 606
SK+ T R RFSIGSAPL K R + ++ R+ P +L+ P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 607 --VP-TLPLTGYLSAFLPSGSVALSHSSRCRYLSSV*VVRSKLGCVHXPPVQPDRCALSG 777
+P T P A+ + A+ S RCR + V C + PP P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAV-----CTN-PPFSPTAAPYPV 115
Query: 778 TIVLSPXG*DTT 813
TIVLSP DTT
Sbjct: 116 TIVLSPTRKDTT 127
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 80.2 bits (189), Expect = 6e-14
Identities = 48/101 (47%), Positives = 51/101 (50%)
Frame = +2
Query: 530 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 709
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 710 SFAPSWAVCTXPPFSPTAAPYPVLSS*VXPGKTRLIATGSS 832
SFAPSWAV PPFSPTAAPYPV K+ ATGSS
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGSS 123
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 595 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 705
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2
Query: 503 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 616
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +2
Query: 503 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 628
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 267 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 365
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.1 bits (149), Expect = 4e-09
Identities = 38/57 (66%), Positives = 39/57 (68%)
Frame = -3
Query: 500 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 330
RGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = -1
Query: 733 HSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQG 578
+SPAWSERP P+ DT SVSYEKAPRFPKG++ + +G Q R + +G
Sbjct: 31 YSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
Score = 55.2 bits (127), Expect = 2e-06
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = -2
Query: 822 VAISRVLPGWTQDDSTXXXXXXXXXXXXVHTAQLGANDLHRTEIPTA*AMRKR-HASRRE 646
+A RV PGWTQDDS + + + ++ + K + +
Sbjct: 1 MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Query: 645 KGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 529
K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 61 KAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 243 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 401
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 48 PDMIRYIDEFGQTTTRMQ 101
PDMIRYIDEFGQTTTRMQ
Sbjct: 347 PDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.015
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 467 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 616
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.020
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 169 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 291
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 313 ERGSGRAPNTQTASPRALADSLMQ 242
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 35.9 bits (79), Expect = 1.3
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +3
Query: 780 YRLESXRVRHDLSPLAAALVXXIXXXRF 863
YRLES VRHDLSPLAAA I R+
Sbjct: 17 YRLESNPVRHDLSPLAAATGNRISRARY 44
Score = 34.7 bits (76), Expect = 3.1
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 733 VHXPPVQPDRCALSG 777
+H PPVQPDRCALSG
Sbjct: 1 MHEPPVQPDRCALSG 15
>UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 2443
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 609 NRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPATRPF-YGSWPFAG 433
N A+ G G V L + +V PL + FV GGG Y T + Y SW +
Sbjct: 291 NGSAYNGNQNGIGFVELQNIKVVDPLPEGAEFVSAT-GGGVYDSVTRTVTWSYDSWSWQN 349
Query: 432 LLLTCSFLRYPPDSVD 385
+ LRYP S D
Sbjct: 350 PIQNTVVLRYPQGSYD 365
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.1
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 675 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 571
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 34.7 bits (76), Expect = 3.1
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = +2
Query: 530 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 709
+RG T Q D R P +CA RP R D C ++ WR HAVG
Sbjct: 638 LRGPATGQAVVDPGRMPRPV-TCA--GRPTRGLDLCGLATVSWVWRSTKCHAVG------ 688
Query: 710 SFAPSWAVCTXPPFSPTAAPYP 775
++P + CT P S APYP
Sbjct: 689 KYSPP-STCTRRPKSQRDAPYP 709
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 34.3 bits (75), Expect = 4.1
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = -3
Query: 203 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWINL 39
+MNA V + FIAA + +T + AFF L S G ++VSY VW +L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a
DNA-binding HTH domain and an aminotransferase domain
(MocR family) and their eukaryotic orthologs; n=1;
Hahella chejuensis KCTC 2396|Rep: Transcriptional
regulator containing a DNA-binding HTH domain and an
aminotransferase domain (MocR family) and their
eukaryotic orthologs - Hahella chejuensis (strain KCTC
2396)
Length = 498
Score = 33.5 bits (73), Expect = 7.2
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 675 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQG 496
MRKR+A R++ R+G EG + G LV S PL+ S F+ VQ
Sbjct: 395 MRKRYAMRQQTLATALQPREGDVEILVEGDNAGLHLV---CWMPSLPLSAVSTFIEQVQT 451
Query: 495 GGAYGKTPATRPFY-GSWPFAGLLL 424
G + PFY G P AGLLL
Sbjct: 452 QGV--RVYPIHPFYHGEPPAAGLLL 474
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.2
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 376 NTVIHRIRGITQERTCE 426
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 33.5 bits (73), Expect = 7.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1
Query: 733 HSPAWSERPTPN 698
HSPAWSERPTPN
Sbjct: 31 HSPAWSERPTPN 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,125,255
Number of Sequences: 1657284
Number of extensions: 16480361
Number of successful extensions: 48116
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 45408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48067
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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