Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N07
         (1045 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g11310.1 68414.m01299 seven transmembrane MLO family protein ...    31   1.7  
At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger) fa...    30   2.2  
At5g25050.1 68418.m02969 integral membrane transporter family pr...    29   3.8  
At4g14970.1 68417.m02301 hypothetical protein                          29   5.1  
At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid t...    29   5.1  
At4g19300.1 68417.m02844 hypothetical protein includes At2g10370...    29   6.7  
At2g27980.1 68415.m03391 expressed protein                             29   6.7  
At2g02770.1 68415.m00220 COP1-interacting protein-related simila...    29   6.7  
At1g35090.1 68414.m04349 hypothetical protein includes At2g10370...    29   6.7  
At5g36050.1 68418.m04343 hypothetical protein includes At2g10370...    28   8.9  

>At1g11310.1 68414.m01299 seven transmembrane MLO family protein /
           MLO-like protein 2 (MLO2) idenctical to membrane protein
           Mlo2 [Arabidopsis thaliana] gi|14091574|gb|AAK53795;
           similar to Mlo [Hordeum vulgare subsp. vulgare]
           gi|1877221|emb|CAB06083 SWISS-PROT:P93766
          Length = 573

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 484 GSGPVHCSHNRTEGDSERGPSSRARR*NQSGKHRH 588
           GS P+H  HN      E  PSS + R +  G H H
Sbjct: 489 GSSPIHLLHNFNNRSVENYPSSPSPRYSGHGHHEH 523


>At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 zinc
           finger, C3HC4 type (RING finger)
          Length = 224

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +2

Query: 113 VLVILFQFRNCQEIPEEVSSEDEKLSEGEKKLSHNILAILE 235
           +LV L  F N + I EE   E+E LSE E ++   + A LE
Sbjct: 102 LLVSLLIFPNDEPIEEEYEIEEEDLSEEEDQIEEAVRASLE 142


>At5g25050.1 68418.m02969 integral membrane transporter family
           protein similar to biopterin transporter (GI:3377706)
           [Leishmania mexicana]; contains 7 transmembrane domains;
           contains Pfam PF03092: BT1 family; contains TIGRFAMS
           TIGR00788: folate/biopterin transporter
          Length = 499

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 98  LPXCLVLVILFQFRNCQEIPEEVSSEDEKLSEGEKKLSHNI-LAILEH 238
           LP C + ++    +N  ++P+E+  ED    + EK+ + N+ LA L H
Sbjct: 447 LPLCFLFLVPKGDQNTFKLPDEIMGEDSDEEKDEKEGTRNLELASLVH 494


>At4g14970.1 68417.m02301 hypothetical protein
          Length = 1286

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 218  ILAILEHYKQPDPTGLPGAKLPD--PYPVPDVKQSLTLGTMNFKNIALYGTNEF 373
            +L +LE ++   PT +P A  PD  P+P P  K+ L +G   F    L   N F
Sbjct: 949  LLNLLEAFQ---PTEIPVANFPDFQPFPSPGTKEYLYIGVSYFFEDILNKGNYF 999


>At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to pEARLI
           1 (Accession No. L43080): an Arabidopsis member of a
           conserved gene family (PGF95-099), Plant Physiol. 109
           (4), 1497 (1995); contains Pfam protease inhibitor/seed
           storage/LTP family domain PF00234
          Length = 203

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 480 LNHVAKV*LPRACNFSRV-ITAWASIAPISA 391
           +N    V LPRACN  RV +   A+IAP +A
Sbjct: 87  INRTTAVSLPRACNMPRVPLQCQANIAPAAA 117


>At4g19300.1 68417.m02844 hypothetical protein includes At2g10370,
           At5g36050, At1g35090, At1g44860, At4g19300, At1g42400,
           At3g43040, At3g42500
          Length = 252

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 180 KNFRKAKKNSVIISWLFWSIINSRIPRGCRELNYQIHTQFRT 305
           K FR  +KN+V+I+  +W II  R   GC       H    T
Sbjct: 195 KRFRAFRKNNVVIALAWWKII--RFYPGCNWFKIVSHAPIST 234


>At2g27980.1 68415.m03391 expressed protein
          Length = 1037

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 CQEIPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGLPGAK-LPD 286
           C+EI   + +    +  GE+KLS+NIL  L   +QP+    P  K  PD
Sbjct: 807 CEEINTTLGN---LIVRGEEKLSNNILNFLRKKEQPNEENCPDYKTTPD 852


>At2g02770.1 68415.m00220 COP1-interacting protein-related similar
           to COP1-interacting protein 4 (CIP4) [Arabidopsis
           thaliana] GI:13160646, COP1-interacting protein 4.1
           (CIP4.1) [Arabidopsis thaliana] GI:13160650
          Length = 548

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 185 LSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDP 289
           L E E+K+ H++LA+ E +   D      A +PDP
Sbjct: 454 LEEMERKIKHDVLALAERFYSADEVKFLSA-IPDP 487


>At1g35090.1 68414.m04349 hypothetical protein includes At2g10370,
           At5g36050, At1g35090, At1g44860, At4g19300, At1g42400,
           At3g43040, At3g42500
          Length = 244

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 180 KNFRKAKKNSVIISWLFWSIINSRIPRGCRELNYQIHTQFRT 305
           K FR  +KN+V+I+  +W II  R   GC       H    T
Sbjct: 187 KRFRAFRKNNVVIALAWWKII--RFYPGCNWFKIVSHAPIST 226


>At5g36050.1 68418.m04343 hypothetical protein includes At2g10370,
           At5g36050, At1g35090, At1g44860, At4g19300, At1g42400,
           At3g43040, At3g42500
          Length = 252

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 180 KNFRKAKKNSVIISWLFWSIINSRIPRGCRELNYQIHTQFRT 305
           K FR  +KN+V+I+  +W II  R   GC       H    T
Sbjct: 195 KRFRAFRKNNVVIALAWWKII--RFYPGCNWFKIVSHAPILT 234


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,791,613
Number of Sequences: 28952
Number of extensions: 260081
Number of successful extensions: 699
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2569571440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)