Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N04
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 60 4e-10
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 56 8e-09
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 45 1e-05
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 40 6e-04
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 34 0.029
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 30 0.48
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 27 3.4
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 27 4.4
SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 26 5.9
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 26 7.8
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 26 7.8
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 60.1 bits (139), Expect = 4e-10
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Frame = +2
Query: 149 FDKHSVDRLEQLFKETVGDQK-EITREQFQKIV-VSKNPFFTERVFQIFDEDDSGSISLQ 322
F ++R+ + F + +Q I R +F I V+ NP R+F + DED G + Q
Sbjct: 18 FSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPL-ASRLFSVVDEDGGGDVDFQ 76
Query: 323 EFIAAVHRFAGQ-SPDDKIRFLFKVYDLDGDGLIQH 427
EFI ++ F+ + ++K++F FK+YD+D DG I +
Sbjct: 77 EFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISN 112
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 55.6 bits (128), Expect = 8e-09
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Frame = +2
Query: 149 FDKHSVDRLEQLFKETVGD--QKEITREQFQKIVVSKNPF-----FTERVFQIFDEDDSG 307
FDK L+Q +K D + + +FQKI PF F E VF +FD D +G
Sbjct: 22 FDKKE---LQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNG 78
Query: 308 SISLQEFIAAVHRFAGQSPDDKIRFLFKVYDLDGDGLIQH 427
I +EFI A+ + +DK+ + F++YDLD +GLI +
Sbjct: 79 YIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISY 118
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 45.2 bits (102), Expect = 1e-05
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 122 VSSSRPRVGFDKHSVDRLEQLFKETVGDQKEITR--EQFQKIVVSKNPFFTERVFQIFDE 295
V SS+ RVG + RLE F E +T + ++ + F +F FD+
Sbjct: 533 VLSSKHRVGLGSSTDTRLE--FDEFCIFLAGVTEWAKGLDAAAINNSSSFLRHLFLRFDK 590
Query: 296 DDSGSISLQEFIAAVHRFAGQSPDDKIRFLFKVYDLDGDGLI 421
+GS+SLQ+ ++ + + I F+F++YD +GDG +
Sbjct: 591 SMTGSLSLQDLVSGIAELKFRDVMRNISFIFELYDFNGDGFM 632
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 39.5 bits (88), Expect = 6e-04
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +2
Query: 209 KEITREQFQKIVVSKNPFFTERVFQIFDEDDSGSISLQEFIAAVHRFAGQSPDDKIRFLF 388
++ R +KIV +R F++FD+D++G ISL+ D ++ +
Sbjct: 93 EDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMI 152
Query: 389 KVYDLDGDGLIQHR 430
+ +DLD DG I +
Sbjct: 153 EEFDLDQDGEINEQ 166
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 33.9 bits (74), Expect = 0.029
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 DEDDSGSISLQEFIAAVHR-FAGQSPDDKIRFLFKVYDLDGDGLI 421
D D +G+I EF+ + R ++++R FKV+D DG+G I
Sbjct: 58 DADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYI 102
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 29.9 bits (64), Expect = 0.48
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Frame = -3
Query: 291 SNIWKTRSVKNGFLETTIF*NCSLVISF*SPTVSLKSCSSRST----LCLSK-PTRGL-- 133
SN++ TRS++N + T SL++ P+++ +C + T C++K P L
Sbjct: 544 SNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEP 603
Query: 132 LLLTVERNSITLS 94
L L++E N ITL+
Sbjct: 604 LFLSMEENLITLA 616
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 598 SPPWLFNWFFKASYVMAPRSSTSASSNIAVV 506
SPP W +K+ Y +A A+S +A V
Sbjct: 619 SPPSKCKWVYKSKYSLAANHKVPAASEVAYV 649
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 350 AGQSPDDKIRFLFKVYDLDGDGLI--QHRXAAARDEGVH 460
A + D+++ F +YD+D DGLI H + R G++
Sbjct: 3 ASKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGIN 41
>SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 318 REMDPESSSSNIWKTRSVKNGFLET 244
REMD E + N WK S +G L+T
Sbjct: 54 REMDAEIPAINSWKKDSSNSGKLDT 78
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 325 LLERNGPRIVFIEYLENPFCEEWIFRDDNL 236
LL +N +F+ L P +++ DDNL
Sbjct: 419 LLSKNPKHDIFVNELFGPVLSVYVYEDDNL 448
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 7.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 554 DGPAFFHVSVLEHRSGQV 501
D AF+H+S+L+H+ G +
Sbjct: 153 DKNAFYHISILKHKPGSL 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,443,545
Number of Sequences: 5004
Number of extensions: 72202
Number of successful extensions: 250
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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