BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_N03 (893 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 140 2e-33 U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 140 2e-33 U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 140 2e-33 M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 140 2e-33 L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 140 2e-33 L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 130 1e-30 AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 130 1e-30 Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 94 1e-19 AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 83 2e-16 M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 9e-14 U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 57 1e-08 AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 48 1e-05 AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 46 4e-05 U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 3e-04 AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 5e-04 U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.006 U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.007 Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 36 0.030 Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.052 U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 36 0.052 AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 36 0.052 U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.068 L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.21 L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.21 AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.28 AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 3.4 Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 5.9 U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 5.9 U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 5.9 U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 5.9 AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 5.9 >Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical protein ZK1010.1 protein. Length = 128 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 >U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein 1, isoform c protein. Length = 538 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 365 IQKESTLHLV 374 Score = 137 bits (332), Expect = 9e-33 Identities = 67/70 (95%), Positives = 68/70 (97%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 441 IQKESTLHLV 450 Score = 93.5 bits (222), Expect = 2e-19 Identities = 45/47 (95%), Positives = 46/47 (97%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 227 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503 >U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein 1, isoform a protein. Length = 838 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 365 IQKESTLHLV 374 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 517 IQKESTLHLV 526 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 593 IQKESTLHLV 602 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 669 IQKESTLHLV 678 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 745 IQKESTLHLV 754 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 821 IQKESTLHLV 830 Score = 137 bits (332), Expect = 9e-33 Identities = 67/70 (95%), Positives = 68/70 (97%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 441 IQKESTLHLV 450 >M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin protein. Length = 838 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 365 IQKESTLHLV 374 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 441 IQKESTLHLV 450 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 517 IQKESTLHLV 526 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 593 IQKESTLHLV 602 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 669 IQKESTLHLV 678 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 745 IQKESTLHLV 754 Score = 138 bits (335), Expect = 4e-33 Identities = 67/70 (95%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820 Query: 267 IQKESTLHLV 296 IQK+STLHLV Sbjct: 821 IQKQSTLHLV 830 >L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribosomal fusion protein protein. Length = 128 Score = 140 bits (338), Expect = 2e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 267 IQKESTLHLV 296 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 >L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:ribosomal proteinfusion protein protein. Length = 163 Score = 130 bits (315), Expect = 1e-30 Identities = 66/147 (44%), Positives = 90/147 (61%) Frame = +3 Query: 93 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 272 +FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56 Query: 273 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 452 E+T+++ Y+TP LAVL++YK+DENGKI RLR+EC Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116 Query: 453 GEQCGAGVFMAVMEDRHYCGKCHSTMV 533 CG GVFMA +RHYCG+CH T+V Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143 >AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like family protein 1,isoform a protein. Length = 163 Score = 130 bits (315), Expect = 1e-30 Identities = 66/147 (44%), Positives = 90/147 (61%) Frame = +3 Query: 93 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 272 +FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56 Query: 273 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 452 E+T+++ Y+TP LAVL++YK+DENGKI RLR+EC Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116 Query: 453 GEQCGAGVFMAVMEDRHYCGKCHSTMV 533 CG GVFMA +RHYCG+CH T+V Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143 >Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical protein F45H11.2 protein. Length = 77 Score = 93.9 bits (223), Expect = 1e-19 Identities = 42/70 (60%), Positives = 54/70 (77%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 266 M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60 Query: 267 IQKESTLHLV 296 + S LHLV Sbjct: 61 VLGGSVLHLV 70 >AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical protein F52C6.4 protein. Length = 292 Score = 83.4 bits (197), Expect = 2e-16 Identities = 37/71 (52%), Positives = 52/71 (73%) Frame = +3 Query: 84 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 263 K+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L Y Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219 Query: 264 NIQKESTLHLV 296 NI+ E +HLV Sbjct: 220 NIRDEDIIHLV 230 Score = 38.7 bits (86), Expect = 0.006 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = +3 Query: 108 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 287 +TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151 Query: 288 HL 293 L Sbjct: 152 RL 153 Score = 34.7 bits (76), Expect = 0.090 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +3 Query: 69 SVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 194 SV M + VKT TGKTIT+E +NVK +++DK+G+ Sbjct: 53 SVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89 >M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.elegans ubiquitin A(UbiA) gene, 5' end. ). Length = 37 Score = 74.5 bits (175), Expect = 9e-14 Identities = 36/37 (97%), Positives = 36/37 (97%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 197 MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37 >U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical protein C16C8.4 protein. Length = 226 Score = 57.2 bits (132), Expect = 1e-08 Identities = 28/68 (41%), Positives = 43/68 (63%) Frame = +3 Query: 84 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 263 + QIFVK L G + ++ DT+ ++K I+ + IP + L F+GK+LED ++ DY Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211 Query: 264 NIQKESTL 287 NIQK ST+ Sbjct: 212 NIQKSSTI 219 >AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical protein F52C6.3 protein. Length = 197 Score = 47.6 bits (108), Expect = 1e-05 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLS 257 ++I+V+ G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161 Query: 258 DYNIQKESTLHL 293 D + + STL L Sbjct: 162 DNSFENGSTLRL 173 Score = 30.3 bits (65), Expect = 1.9 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 263 M + +KT TGK IT+E S VK +++DK+G+ G Q +E T+ D Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55 Query: 264 NIQK 275 IQ+ Sbjct: 56 KIQE 59 >AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical protein F14D2.11 protein. Length = 110 Score = 46.0 bits (104), Expect = 4e-05 Identities = 28/70 (40%), Positives = 36/70 (51%) Frame = +3 Query: 84 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 263 K Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +Y Sbjct: 42 KFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEY 96 Query: 264 NIQKESTLHL 293 NI ST+ L Sbjct: 97 NISNNSTMDL 106 >U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical protein C16C8.13 protein. Length = 244 Score = 43.2 bits (97), Expect = 3e-04 Identities = 25/61 (40%), Positives = 32/61 (52%) Frame = +3 Query: 111 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLH 290 +G L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240 Query: 291 L 293 L Sbjct: 241 L 241 >AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like family protein 1,isoform b protein. Length = 47 Score = 42.3 bits (95), Expect = 5e-04 Identities = 20/46 (43%), Positives = 32/46 (69%) Frame = +3 Query: 93 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 230 +FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A + Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46 >U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical protein C16C8.16 protein. Length = 592 Score = 38.7 bits (86), Expect = 0.006 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = +3 Query: 129 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 293 L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264 >U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical protein C16C8.14 protein. Length = 233 Score = 38.3 bits (85), Expect = 0.007 Identities = 22/53 (41%), Positives = 28/53 (52%) Frame = +3 Query: 129 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 287 L V SDTI +K +I GI R K LED TL+ YNI++ ST+ Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228 >Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical protein F56F3.4 protein. Length = 341 Score = 36.3 bits (80), Expect = 0.030 Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Frame = +3 Query: 117 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 287 K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ + Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89 >Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical protein ZK20.3 protein. Length = 372 Score = 35.5 bits (78), Expect = 0.052 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLED 242 + + +TLT LE+ TI VKA + ++G P Q+LI+ GK L+D Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105 >U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. Length = 655 Score = 35.5 bits (78), Expect = 0.052 Identities = 14/62 (22%), Positives = 35/62 (56%) Frame = +3 Query: 108 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 287 + G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + + Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643 Query: 288 HL 293 +L Sbjct: 644 YL 645 >AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (splicing factor) relatedprotein 21 protein. Length = 655 Score = 35.5 bits (78), Expect = 0.052 Identities = 14/62 (22%), Positives = 35/62 (56%) Frame = +3 Query: 108 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 287 + G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + + Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643 Query: 288 HL 293 +L Sbjct: 644 YL 645 >U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical protein C16C8.11 protein. Length = 214 Score = 35.1 bits (77), Expect = 0.068 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = +3 Query: 105 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 263 ++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201 >L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical protein ZK688.5b protein. Length = 1595 Score = 33.5 bits (73), Expect = 0.21 Identities = 21/80 (26%), Positives = 39/80 (48%) Frame = +3 Query: 57 GIGDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL 236 G G+ +++ +KTL + T+ + DTI+++ + + I QR+I G+ L Sbjct: 11 GNGEPDLPTTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVL 70 Query: 237 EDGRTLSDYNIQKESTLHLV 296 +T+ I T+HLV Sbjct: 71 NSTQTVQAAGISDGQTVHLV 90 >L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein ZK688.5a protein. Length = 1620 Score = 33.5 bits (73), Expect = 0.21 Identities = 21/80 (26%), Positives = 39/80 (48%) Frame = +3 Query: 57 GIGDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL 236 G G+ +++ +KTL + T+ + DTI+++ + + I QR+I G+ L Sbjct: 11 GNGEPDLPTTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVL 70 Query: 237 EDGRTLSDYNIQKESTLHLV 296 +T+ I T+HLV Sbjct: 71 NSTQTVQAAGISDGQTVHLV 90 >AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical protein F54D10.7 protein. Length = 264 Score = 33.1 bits (72), Expect = 0.28 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 108 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 287 L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S + Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248 >AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical protein F52C6.2 protein. Length = 110 Score = 29.5 bits (63), Expect = 3.4 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 263 M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55 Query: 264 NIQK 275 IQ+ Sbjct: 56 KIQE 59 >Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical protein F39B2.10 protein. Length = 402 Score = 28.7 bits (61), Expect = 5.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +3 Query: 99 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 197 + TL G+TI V P + I + K+ EG+P Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311 >U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon guidance protein 3,isoform b protein. Length = 1273 Score = 28.7 bits (61), Expect = 5.9 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = -1 Query: 638 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 492 +P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622 >U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon guidance protein 3,isoform a protein. Length = 1269 Score = 28.7 bits (61), Expect = 5.9 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = -1 Query: 638 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 492 +P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622 >U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein F48E3.3 protein. Length = 1493 Score = 28.7 bits (61), Expect = 5.9 Identities = 11/52 (21%), Positives = 29/52 (55%) Frame = +3 Query: 87 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 242 +Q+ + + TGK++ + VE + +E D+EG+ + L+ + ++ ++ Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200 >AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. Length = 1273 Score = 28.7 bits (61), Expect = 5.9 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = -1 Query: 638 APTLCQDFI*NPSYTAVASVPYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 492 +P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,755,249 Number of Sequences: 27780 Number of extensions: 297342 Number of successful extensions: 823 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 734 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 820 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2265843888 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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