Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N02
         (872 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    32   0.020
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    30   0.080
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.99 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   1.7  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   4.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.3  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   5.3  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   5.3  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   9.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 32.3 bits (70), Expect = 0.020
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +2

Query: 260 GGGAGFRSNRSGGVQRGRNRGG 325
           GGG G R  R GG  RGR RGG
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGG 87



 Score = 24.6 bits (51), Expect = 4.0
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 215 GGAGRKFDANKRTGRGGGAGFRSNRSGG 298
           GG GR     +  GRG G G R  R GG
Sbjct: 65  GGGGRGGRGGRGGGRGRGRG-RGGRDGG 91


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 0.080
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 720 GGASVGGTIRNNPKRGGGGIRNQSNSGARGGNXXXRGG 833
           GG+++ G   NN   GGGG    SN GA G      GG
Sbjct: 386 GGSNLPGN--NNGGAGGGGSNTPSNHGALGNTQNNAGG 421


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +2

Query: 209 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 379
           +GGGA         +G GGGAG      GG+  G   GG     ++  G   +   H
Sbjct: 671 LGGGA-----VGGGSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGGAAAATGH 722



 Score = 25.8 bits (54), Expect = 1.7
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +2

Query: 212  GGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDM 385
            GGG     D +   G GGG   G     SGG   G + GG +  T+   G  +ST + D 
Sbjct: 824  GGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTS---GGGSSTTRRDH 880

Query: 386  FNDFGERKLQRNSGTITT 439
              D+    +Q  +GT  T
Sbjct: 881  NIDYSSLFIQL-TGTFPT 897



 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 720 GGASVGGTIRNNPKRGGGGIRNQSNSGARGG 812
           GG   GG +R +    GGG      SG   G
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGGTSG 870



 Score = 24.6 bits (51), Expect = 4.0
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGI 328
           GG  G +++   R G G G G      GG   GR  GG+
Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGGGGGGGGG---GRAGGGV 575



 Score = 23.8 bits (49), Expect = 7.0
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +2

Query: 185 IKANKKTRIGGGAGRK--FDANKRTGRGGGAGFRSNRSGGVQRGRNRGGI 328
           +  N     GGG G     + ++  G GG AG  S+  G    G  RGG+
Sbjct: 508 VVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAGGGSD--GPEYEGAGRGGV 555


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 720 GGASVG-GTIRNNPKRGGGGIRNQSNSGARGGNXXXRGGA 836
           GG SVG G I ++   GGGG    S+ G   G      GA
Sbjct: 662 GGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGA 701


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 720 GGASVGGTIRNNPKRGGGGIRNQSNSGA 803
           G A+   T   NP  G GG  N +NS +
Sbjct: 136 GSATTTTTTPTNPGNGNGGSNNNNNSNS 163


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 242 NKRTGRGGGAGFRSNRSGGVQRGRNRGGI 328
           +++T  GGG G  +  SGG   G + G +
Sbjct: 243 SQQTSNGGGTGGGTGGSGGAGSGGSSGNL 271


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 15/49 (30%), Positives = 17/49 (34%)
 Frame = +2

Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGD 358
           GGG GR  D   R     G G      GG+Q       I       RG+
Sbjct: 228 GGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGRGNAIPSMVVDRRGE 276



 Score = 23.8 bits (49), Expect = 7.0
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +2

Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQR--GRNRGG 325
           GGG G         G GGG   R +R    +R  G N GG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 741  TIRNNPKRG-GGGIRNQSNSGARGG 812
            T+ +N   G GGG  NQ+ +G+ GG
Sbjct: 1124 TVNSNGNAGSGGGQANQAAAGSDGG 1148


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 472 VQIGYKQLGRTSCYGPTVS 416
           VQIG +Q+G+T  +GP  S
Sbjct: 228 VQIGTRQVGQTLHFGPNPS 246


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 472 VQIGYKQLGRTSCYGPTVS 416
           VQIG +Q+G+T  +GP  S
Sbjct: 228 VQIGTRQVGQTLHFGPNPS 246


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 470 DFGVSDSDIKELFSEFGIL 526
           DFG   +D +++ SEFG +
Sbjct: 79  DFGYDIADFRDIHSEFGTI 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,138
Number of Sequences: 2352
Number of extensions: 17125
Number of successful extensions: 67
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)