Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N02
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 119 1e-26
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 93 9e-19
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 41 0.005
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 41 0.005
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 41 0.005
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 41 0.005
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 41 0.005
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 41 0.005
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 37 0.083
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 37 0.083
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 37 0.083
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 37 0.083
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 37 0.083
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 37 0.083
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 37 0.083
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 37 0.083
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 37 0.083
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 37 0.11
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 37 0.11
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 37 0.11
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 37 0.11
BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein. 37 0.11
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 37 0.11
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 37 0.11
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 37 0.11
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 37 0.11
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 37 0.11
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 37 0.11
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 36 0.14
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 36 0.14
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 36 0.14
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 36 0.14
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 36 0.14
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 36 0.14
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 36 0.14
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 36 0.14
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 36 0.14
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 36 0.14
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 36 0.19
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 36 0.19
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 36 0.19
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 36 0.19
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 36 0.19
AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein famil... 36 0.19
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 36 0.19
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 36 0.19
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 36 0.19
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 36 0.19
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 36 0.19
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 36 0.25
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 36 0.25
BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.33
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 35 0.33
BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.33
BC007449-1|AAH07449.1| 456|Homo sapiens KIAA1627 protein protein. 35 0.33
BC006565-1|AAH06565.1| 456|Homo sapiens KIAA1627 protein protein. 35 0.33
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 35 0.33
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 35 0.33
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 35 0.33
AK055555-1|BAB70954.1| 456|Homo sapiens protein ( Homo sapiens ... 35 0.33
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 35 0.33
AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator av... 35 0.33
AB046847-1|BAB13453.1| 468|Homo sapiens KIAA1627 protein protein. 35 0.33
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 35 0.44
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 35 0.44
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 35 0.44
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 35 0.44
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 35 0.44
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 35 0.44
Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA seque... 34 0.58
X95525-1|CAA64777.1| 799|Homo sapiens hTAFII100 protein. 34 0.58
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 34 0.58
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 34 0.58
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 34 0.58
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 34 0.58
U80191-1|AAC51215.1| 800|Homo sapiens TFIID subunit TAFII100 pr... 34 0.58
U75309-1|AAC50902.1| 801|Homo sapiens TBP-associated factor pro... 34 0.58
DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein. 34 0.58
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 34 0.58
CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein. 34 0.58
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.58
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.58
BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directe... 34 0.58
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 34 0.58
BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directe... 34 0.58
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC052268-1|AAH52268.2| 800|Homo sapiens TAF5 RNA polymerase II,... 34 0.58
BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directe... 34 0.58
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 34 0.58
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 34 0.58
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein. 34 0.58
BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.58
BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein. 34 0.58
AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46... 34 0.58
AL591408-4|CAI16747.1| 800|Homo sapiens TAF5 RNA polymerase II,... 34 0.58
AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.58
AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein pr... 34 0.58
AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein pr... 34 0.58
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 34 0.58
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 34 0.58
AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein pr... 34 0.58
AK223615-1|BAD97335.1| 803|Homo sapiens Transcription initiatio... 34 0.58
AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2 p... 34 0.58
AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein. 34 0.58
X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion p... 34 0.77
S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein. 34 0.77
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 33 1.0
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 33 1.0
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 33 1.0
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 33 1.0
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 33 1.0
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 33 1.0
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 33 1.0
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 33 1.0
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 33 1.0
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 33 1.0
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 33 1.0
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 33 1.0
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 33 1.0
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 33 1.0
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 33 1.0
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 33 1.0
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 33 1.0
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 33 1.0
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 33 1.0
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 33 1.0
AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein prot... 33 1.0
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 33 1.0
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 33 1.0
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 33 1.0
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 33 1.4
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 33 1.4
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 33 1.4
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 33 1.4
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 33 1.4
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 33 1.4
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 33 1.4
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 33 1.4
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 33 1.4
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 33 1.4
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 33 1.4
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 33 1.8
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 33 1.8
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 33 1.8
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.8
BC060828-1|AAH60828.1| 593|Homo sapiens AT rich interactive dom... 33 1.8
BC033163-1|AAH33163.1| 443|Homo sapiens ARID3A protein protein. 33 1.8
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 33 1.8
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 33 1.8
BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein. 33 1.8
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 33 1.8
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 33 1.8
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 33 1.8
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 33 1.8
AY152547-1|AAN74028.1| 593|Homo sapiens E2F binding protein pro... 33 1.8
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 33 1.8
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 33 1.8
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 33 1.8
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 33 1.8
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 33 1.8
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 33 1.8
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 33 1.8
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 33 1.8
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 33 1.8
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 33 1.8
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 33 1.8
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 33 1.8
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 32 2.4
U88047-1|AAC32888.1| 593|Homo sapiens DNA binding protein homol... 32 2.4
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 32 2.4
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 32 2.4
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 32 2.4
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 32 2.4
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 32 2.4
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 32 2.4
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 32 2.4
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 32 2.4
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 32 2.4
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 32 2.4
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 32 2.4
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 32 2.4
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 32 2.4
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 32 2.4
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 32 2.4
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 32 2.4
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 32 2.4
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 32 2.4
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 32 2.4
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 32 2.4
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 32 2.4
AF039850-1|AAC69994.1| 593|Homo sapiens dead ringer like 1 prot... 32 2.4
AC005391-1|AAC28918.1| 363|Homo sapiens DRIL1 DNA binding prote... 32 2.4
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 32 2.4
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 32 2.4
S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein p... 32 3.1
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 32 3.1
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 32 3.1
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 32 3.1
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 32 3.1
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 32 3.1
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 32 3.1
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 32 3.1
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 32 3.1
AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens ... 32 3.1
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 32 3.1
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 32 3.1
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 32 3.1
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 32 3.1
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 32 3.1
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 31 4.1
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 31 4.1
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 4.1
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 4.1
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 4.1
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 31 4.1
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 4.1
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 4.1
BC013115-1|AAH13115.1| 358|Homo sapiens RBM9 protein protein. 31 5.5
AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spli... 31 5.5
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 31 7.2
X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein. 31 7.2
X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein. 31 7.2
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 31 7.2
U36619-1|AAC16921.1| 176|Homo sapiens Y-chromosome RNA recognit... 31 7.2
D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein. 31 7.2
D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein. 31 7.2
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 31 7.2
D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein. 31 7.2
CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein. 31 7.2
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 31 7.2
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 31 7.2
BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain ... 31 7.2
BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain ... 31 7.2
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 31 7.2
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 31 7.2
BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, sing... 31 7.2
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 31 7.2
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 31 7.2
BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, sing... 31 7.2
BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, sing... 31 7.2
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 31 7.2
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 31 7.2
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 31 7.2
AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens ... 31 7.2
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 31 7.2
AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein... 31 7.2
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 31 7.2
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 31 7.2
AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein pro... 31 7.2
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 31 7.2
AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein. 31 7.2
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 31 7.2
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 30 9.5
BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic recombina... 30 9.5
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 30 9.5
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 30 9.5
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 30 9.5
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 30 9.5
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 30 9.5
AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic recombina... 30 9.5
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 30 9.5
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 1... 30 9.5
AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11 ... 30 9.5
AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and r... 30 9.5
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 119 bits (287), Expect = 1e-26
Identities = 77/153 (50%), Positives = 94/153 (61%), Gaps = 13/153 (8%)
Frame = +2
Query: 149 MVDQIEMALDDIIKANKKTRIGGGAGR-KFDANKRTGRGGGA--GFRSNRSGGVQRGR-- 313
M D+++M+LDDIIK N+ R G G GR + A + GRGGGA R NR GG R R
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA 60
Query: 314 ------NRGGITKSTNYSRG-DVNSTWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNL 469
GG + YSR + W+HD+F+ FG +G T G KLLVSNL
Sbjct: 61 IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGG-----GAGVETGG--KLLVSNL 113
Query: 470 DFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 568
DFGVSD+DI+ELF+EFG LK A+VHYDRSGRSL
Sbjct: 114 DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSL 146
Score = 85.4 bits (202), Expect = 2e-16
Identities = 48/82 (58%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Frame = +3
Query: 573 TADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRN 752
TADV FERKADA+KAMKQYNGVPLDGR MNIQL TS+I+ R A++ + GG RN
Sbjct: 148 TADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDAQRRPAQS----VNRGGMTRN 203
Query: 753 NPK---RGGGGIRNQSNSGARG 809
GGGG R + GARG
Sbjct: 204 RGAGGFGGGGGTRRGTRGGARG 225
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 93.5 bits (222), Expect = 9e-19
Identities = 65/129 (50%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Frame = +2
Query: 218 GAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGR--------NRGGITKSTNYSRG-DVN 364
G GR A R GR GGA R NR GG R R GG + YSR +
Sbjct: 4 GRGR---AGSRAGRRGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRPAPYSRPKQLP 60
Query: 365 STWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASV 541
W+HD+F+ FG +G T G KLLVSNLDFGVSD+DI+ELF+EFG LK A+V
Sbjct: 61 DKWQHDLFDSGFGG-----GAGVETGG--KLLVSNLDFGVSDADIQELFAEFGTLKKAAV 113
Query: 542 HYDRSGRSL 568
HYDRSGRSL
Sbjct: 114 HYDRSGRSL 122
Score = 81.4 bits (192), Expect = 4e-15
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Frame = +3
Query: 573 TADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRN 752
TA+V FERKADA+KAMKQYNG PLDGR MNIQL TS+I+ R A++ + GG RN
Sbjct: 124 TANVHFERKADALKAMKQYNGFPLDGRPMNIQLVTSQIDAQRRPAQS----VNRGGMTRN 179
Query: 753 NPK---RGGGGIRNQSNSGARG 809
GGGG R + GARG
Sbjct: 180 RGAGGFGGGGGTRRGTRGGARG 201
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
T P ++ V +DF ++SD+++ FS++G +K + DR+G S Y
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
T P ++ V +DF ++SD+++ FS++G +K + DR+G S Y
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 81
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
T P ++ V +DF ++SD+++ FS++G +K + DR+G S Y
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 81
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
T P ++ V +DF ++SD+++ FS++G +K + DR+G S Y
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
T P ++ V +DF ++SD+++ FS++G +K + DR+G S Y
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
T P ++ V +DF ++SD+++ FS++G +K + DR+G S Y
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGY 75
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 37.1 bits (82), Expect = 0.083
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGR----GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 379
GGG G++ + GR GGG+G NRS G R RGG RG + +
Sbjct: 208 GGGYGQQDRGGRGRGRSSGGGGGSGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DR 262
Query: 380 DMFNDFG---ERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
FN FG ++ + +S + + V L V+ + + F + GI+K+
Sbjct: 263 GGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 316
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 340 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 393
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 394 PMGRGGYGGGGSGGGGRGGFPSGGGG 419
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 392 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 446
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
G G G + ++G GGG G+ GG RGR+ GG
Sbjct: 191 GSGGGGGYGNQDQSG-GGGGGYGQQDRGGRGRGRSSGG 227
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 37.1 bits (82), Expect = 0.083
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 325
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 6 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 44
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 28 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 70
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.11
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +2
Query: 158 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 337
+IE D +N + RIG +GR + + GR GG R +R G + G + G +S
Sbjct: 349 EIEEYYDGNTSSNSRQRIGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 407
Query: 338 TNYSR 352
N +R
Sbjct: 408 GNRNR 412
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 36.7 bits (81), Expect = 0.11
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT------SEINTLRPEARNR----IGG 725
A V FE ADA A++ NG LDG+A+ + AT S P +R R G
Sbjct: 46 AFVTFESPADAKAAVRDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGT 105
Query: 726 ASVGGTIRNNPKRGG 770
GG R +P RGG
Sbjct: 106 RGGGGGPRRSPSRGG 120
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 11 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 69
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 70 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 127
Query: 560 RS 565
RS
Sbjct: 128 RS 129
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +2
Query: 209 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 383 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 559
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 560 RS 565
RS
Sbjct: 136 RS 137
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.14
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IG 722
A V FE ADA A + NG LDG+A+ ++ AT + R P R+R G
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRG 111
Query: 723 GASVGGTIRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
G G R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA-TSEINTLRPEARNRIGGASVGGTIRN 752
A V FER D+ +AM++ NG+ LDGR + + + T +T P S GG
Sbjct: 163 AFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGG 222
Query: 753 NPKRGGGGIRNQSNSGARG 809
GGGG R + + RG
Sbjct: 223 GGGGGGGGGRRRDSYYDRG 241
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRS 565
T L V L ++ D++E+FS +G L +V YD R+GRS
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRS 159
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA-TSEINTLRPEARNRIGGASVGGTIRN 752
A V FER D+ +AM++ NG+ LDGR + + + T +T P S GG
Sbjct: 163 AFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGG 222
Query: 753 NPKRGGGGIRNQSNSGARG 809
GGGG R + + RG
Sbjct: 223 GGGGGGGGGRRRDSYYDRG 241
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRS 565
T L V L ++ D++E+FS +G L +V YD R+GRS
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRS 159
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.14
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IG 722
A V FE ADA A + NG LDG+A+ ++ AT + R P R+R G
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRG 111
Query: 723 GASVGGTIRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
G G R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.14
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IG 722
A V FE ADA A + NG LDG+A+ ++ AT + R P R+R G
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRG 111
Query: 723 GASVGGTIRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
G G R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.14
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IG 722
A V FE ADA A + NG LDG+A+ ++ AT + R P R+R G
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRG 111
Query: 723 GASVGGTIRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
G G R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.14
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IG 722
A V FE ADA A + NG LDG+A+ ++ AT + R P R+R G
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRG 111
Query: 723 GASVGGTIRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
G G R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.14
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IG 722
A V FE ADA A + NG LDG+A+ ++ AT + R P R+R G
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRG 111
Query: 723 GASVGGTIRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
G G R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA-TSEINTLRPEARNRIGGASVGGTIRN 752
A V FER D+ +AM++ NG+ LDGR + + + T +T P S GG
Sbjct: 163 AFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGG 222
Query: 753 NPKRGGGGIRNQSNSGARG 809
GGGG R + + RG
Sbjct: 223 GGGGGGGGGRRRDSYYDRG 241
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRS 565
T L V L ++ D++E+FS +G L +V YD R+GRS
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRS 159
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 36.3 bits (80), Expect = 0.14
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA-TSEINTLRPEARNRIGGASVGGTIRN 752
A V FER D+ +AM++ NG+ LDGR + + + T +T P S GG
Sbjct: 163 AFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGG 222
Query: 753 NPKRGGGGIRNQSNSGARG 809
GGGG R + + RG
Sbjct: 223 GGGGGGGGGRRRDSYYDRG 241
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRS 565
T L V L ++ D++E+FS +G L +V YD R+GRS
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRS 159
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 433
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 433
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT------SEINTLRPEARNR----IGG 725
A V FE ADA A + NG LDG+A+ + AT S P +R R G
Sbjct: 52 AFVTFESPADAKAAARDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGT 111
Query: 726 ASVGGTIRNNPKRGG 770
GG R +P RGG
Sbjct: 112 RGGGGGPRRSPSRGG 126
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 433
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.19
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 334
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 206 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 313
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 325
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein family A
member 1 protein.
Length = 199
Score = 35.9 bits (79), Expect = 0.19
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 334
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGDNFRGGGRGGFGRGGGRGGFNK 60
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGR 313
GGG G + GRGGG GFR R GG RGR
Sbjct: 170 GGGRG-----GRGGGRGGGGGFRGGRGGGF-RGR 197
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 433
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.19
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 334
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 206 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 313
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 325
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT------SEINTLRPEARNR----IGG 725
A V FE ADA A + NG LDG+A+ + AT S P +R R G
Sbjct: 52 AFVTFESPADAKAAARDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGT 111
Query: 726 ASVGGTIRNNPKRGG 770
GG R +P RGG
Sbjct: 112 RGGGGGPRRSPSRGG 126
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 433
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 433
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 434 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLDF V +KE+FS G +K A + D+ G+S
Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKS 272
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLDF V +KE+FS G +K A + D+ G+S
Sbjct: 255 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKS 292
Score = 31.9 bits (69), Expect = 3.1
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Frame = +2
Query: 209 IGGGAGRKFDANKR---TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 379
IGG AGR +N +G GG G ++ +GG+ G +R ++ S + + + +
Sbjct: 460 IGGFAGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILER 517
Query: 380 DMFNDFGERKLQRNSGT---ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 550
+ D G SG I + ++ V NL F ++ +KE FS+ G + A + +
Sbjct: 518 SIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME 577
Query: 551 RSGRS 565
+G+S
Sbjct: 578 -NGKS 581
>BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 35.1 bits (77), Expect = 0.33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V N+ + D +KELF E+G +S V D SG+S
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKS 238
>BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>BC007449-1|AAH07449.1| 456|Homo sapiens KIAA1627 protein protein.
Length = 456
Score = 35.1 bits (77), Expect = 0.33
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +3
Query: 675 TSEINTLRPEA------RNRIGGASVGGTIRNNPKRGGGGIRNQSN-SGARGGNXXXRGG 833
T EI LRP++ +R GGA GG R G G RN+SN G RGG RGG
Sbjct: 389 TEEIERLRPKSPPPKSKSDRGGGAPRGGG-RGGTSAGRGRERNRSNFRGERGGFRGGRGG 447
Query: 834 A 836
A
Sbjct: 448 A 448
>BC006565-1|AAH06565.1| 456|Homo sapiens KIAA1627 protein protein.
Length = 456
Score = 35.1 bits (77), Expect = 0.33
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +3
Query: 675 TSEINTLRPEA------RNRIGGASVGGTIRNNPKRGGGGIRNQSN-SGARGGNXXXRGG 833
T EI LRP++ +R GGA GG R G G RN+SN G RGG RGG
Sbjct: 389 TEEIERLRPKSPPPKSKSDRGGGAPRGGG-RGGTSAGRGRERNRSNFRGERGGFRGGRGG 447
Query: 834 A 836
A
Sbjct: 448 A 448
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 35.1 bits (77), Expect = 0.33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V N+ + D +KELF E+G +S V D SG+S
Sbjct: 35 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKS 74
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 35.1 bits (77), Expect = 0.33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V N+ + D +KELF E+G +S V D SG+S
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKS 238
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 35.1 bits (77), Expect = 0.33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V N+ + D +KELF E+G +S V D SG+S
Sbjct: 184 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKS 223
>AK055555-1|BAB70954.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ30993 fis, clone HLUNG1000064, weakly similar to
KARYOGAMY PROTEIN KAR4. ).
Length = 456
Score = 35.1 bits (77), Expect = 0.33
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +3
Query: 675 TSEINTLRPEA------RNRIGGASVGGTIRNNPKRGGGGIRNQSN-SGARGGNXXXRGG 833
T EI LRP++ +R GGA GG R G G RN+SN G RGG RGG
Sbjct: 389 TEEIERLRPKSPPPKSKSDRGGGAPRGGG-RGGTSAGRGRERNRSNFRGERGGFRGGRGG 447
Query: 834 A 836
A
Sbjct: 448 A 448
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 35.1 bits (77), Expect = 0.33
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V N+ + D +KELF E+G +S V D SG+S
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKS 238
>AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator aven
protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 355
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>AB046847-1|BAB13453.1| 468|Homo sapiens KIAA1627 protein protein.
Length = 468
Score = 35.1 bits (77), Expect = 0.33
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +3
Query: 675 TSEINTLRPEA------RNRIGGASVGGTIRNNPKRGGGGIRNQSN-SGARGGNXXXRGG 833
T EI LRP++ +R GGA GG R G G RN+SN G RGG RGG
Sbjct: 401 TEEIERLRPKSPPPKSKSDRGGGAPRGGG-RGGTSAGRGRERNRSNFRGERGGFRGGRGG 459
Query: 834 A 836
A
Sbjct: 460 A 460
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1491 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1539
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 188 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 322
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + V NL V + +++LFS+FG + S V D SG S
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLDF V +KE+FS G +K+ S D+ G+S
Sbjct: 182 IFVANLDFKVGWKKLKEVFSIAGTVKAGSYKEDKDGKS 219
>Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA sequence
from clone RP1-222E13 on chromosome 22. ).
Length = 421
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 317 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348
>X95525-1|CAA64777.1| 799|Homo sapiens hTAFII100 protein.
Length = 799
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 693 LRPEARNRIGGASVGGTIRNNPKRGGGGIRNQSNSGARGG 812
L P+A + G S GGT N P GGG + S++G GG
Sbjct: 24 LPPQAGDGAGEGS-GGTTNNGPNGGGGNVAASSSTGGDGG 62
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 79 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 137
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 138 DFGNYNNQSSN 148
>U80191-1|AAC51215.1| 800|Homo sapiens TFIID subunit TAFII100
protein.
Length = 800
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 693 LRPEARNRIGGASVGGTIRNNPKRGGGGIRNQSNSGARGG 812
L P+A + G S GGT N P GGG + S++G GG
Sbjct: 24 LPPQAGDGAGEGS-GGTTNNGPNGGGGNVAASSSTGGDGG 62
>U75309-1|AAC50902.1| 801|Homo sapiens TBP-associated factor
protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 693 LRPEARNRIGGASVGGTIRNNPKRGGGGIRNQSNSGARGG 812
L P+A + G S GGT N P GGG + S++G GG
Sbjct: 25 LPPQAGDGAGEGS-GGTTNNGPNGGGGNVAASSSTGGDGG 63
>DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein.
Length = 163
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 59 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 90
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 34.3 bits (75), Expect = 0.58
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR------PEARN--RIGGA 728
A V FE ADA A + NG LDG+A+ ++ AT R P +R R GA
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGA 111
Query: 729 SVGGT--IRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
GG+ R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein.
Length = 421
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 317 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 50 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 108
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 109 DFGNYNNQSSN 119
>BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 50 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 108
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 109 DFGNYNNQSSN 119
>BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 317 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 392
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 288 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 319
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC052268-1|AAH52268.2| 800|Homo sapiens TAF5 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 100kD
protein.
Length = 800
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 693 LRPEARNRIGGASVGGTIRNNPKRGGGGIRNQSNSGARGG 812
L P+A + G S GGT N P GGG + S++G GG
Sbjct: 24 LPPQAGDGAGEGS-GGTTNNGPNGGGGNVAASSSTGGDGG 62
>BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 317 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 34.3 bits (75), Expect = 0.58
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR------PEARN--RIGGA 728
A V FE ADA A + NG LDG+A+ ++ AT R P +R R GA
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGA 111
Query: 729 SVGGT--IRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
GG+ R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 181 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 239
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 240 DFGNYNNQSSN 250
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 313 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 344
>BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 158 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 337
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 338 TNYSR 352
N +R
Sbjct: 722 GNRNR 726
>BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein.
Length = 467
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 158 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 337
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 393 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 451
Query: 338 TNYSR 352
N +R
Sbjct: 452 GNRNR 456
>AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46
protein.
Length = 421
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 317 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348
>AL591408-4|CAI16747.1| 800|Homo sapiens TAF5 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 100kD
protein.
Length = 800
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 693 LRPEARNRIGGASVGGTIRNNPKRGGGGIRNQSNSGARGG 812
L P+A + G S GGT N P GGG + S++G GG
Sbjct: 24 LPPQAGDGAGEGS-GGTTNNGPNGGGGNVAASSSTGGDGG 62
>AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 158 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 337
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 338 TNYSR 352
N +R
Sbjct: 722 GNRNR 726
>AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 288 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 319
>AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein
protein.
Length = 421
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 317 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 34.3 bits (75), Expect = 0.58
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR------PEARN--RIGGA 728
A V FE ADA A + NG LDG+A+ ++ AT R P +R R GA
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGA 111
Query: 729 SVGGT--IRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
GG+ R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 34.3 bits (75), Expect = 0.58
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR------PEARN--RIGGA 728
A V FE ADA A + NG LDG+A+ ++ AT R P +R R GA
Sbjct: 52 AFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGA 111
Query: 729 SVGGT--IRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
GG+ R P RGG GG N + S +RG RG
Sbjct: 112 GRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 152
>AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein
protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 158 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 337
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 325 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 383
Query: 338 TNYSR 352
N +R
Sbjct: 384 GNRNR 388
>AK223615-1|BAD97335.1| 803|Homo sapiens Transcription initiation
factor TFIID subunit 5 variant protein.
Length = 803
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 693 LRPEARNRIGGASVGGTIRNNPKRGGGGIRNQSNSGARGG 812
L P+A + G S GGT N P GGG + S++G GG
Sbjct: 27 LPPQAGDGAGEGS-GGTTNNGPNGGGGNVAASSSTGGDGG 65
>AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2
protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 158 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 337
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 338 TNYSR 352
N +R
Sbjct: 722 GNRNR 726
>AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein.
Length = 424
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 671
A+VVF +K DA+ A K+YN LDG+ M L
Sbjct: 320 AEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 351
>X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion
protein.
Length = 462
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNY 346
GGG R + GRGGG G R G + G N+ G+ K Y
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVY 273
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein.
Length = 462
Score = 33.9 bits (74), Expect = 0.77
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNY 346
GGG R + GRGGG G R G + G N+ G+ K Y
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVY 273
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 312
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 336 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 389
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 390 PMGRGGYGGGGSGGGGRGGFPSGGGG 415
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 228 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 265
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 337 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 390
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGG 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 33.5 bits (73), Expect = 1.0
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +2
Query: 374 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 553
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGEHARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 554 SGRS 565
G+S
Sbjct: 201 DGKS 204
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 41
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 337 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 390
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGG 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 337 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 390
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGG 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 337 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 390
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGG 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 337 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 390
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGG 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 337 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 390
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGG 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N V D +KELFS+FG S V D +G+S
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKS 230
>AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein
protein.
Length = 157
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 70 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 123
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 124 PMGRGGYGGGGSGGGGRGGFPSGGGG 149
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 312
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 336 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 389
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 390 PMGRGGYGGGGSGGGGRGGFPSGGGG 415
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 228 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 265
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 254 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 424
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 425 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 532
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 337 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 390
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 391 PMGRGGYGGGGSGGGGRGGFPSGGGG 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) isoform a variant
protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 26/86 (30%), Positives = 33/86 (38%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNN 755
A V F+ A A+ ++G G + + AT + NR GG GG R
Sbjct: 111 ATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADF------NRGGGNGRGGRGRGG 164
Query: 756 PKRGGGGIRNQSNSGARGGNXXXRGG 833
P GG S G RGG GG
Sbjct: 165 PMGRGGYGGGGSGGGGRGGFPSGGGG 190
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 382
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 163 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 217
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 174 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 219
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 226 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 262
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 148
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 155 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 191
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 148
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 155 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 191
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 113 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 158
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 165 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 201
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 111 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 156
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 163 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 199
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 149
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 156 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 192
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 149
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 156 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 192
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 149
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 156 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 192
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 173 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 218
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 225 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 261
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 419 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
NS + +T P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 148
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 155 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 191
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 33.1 bits (72), Expect = 1.4
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +2
Query: 374 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 553
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGECARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 554 SGRS 565
G+S
Sbjct: 201 DGKS 204
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI----NTLRPEARNRIGGASVGGT 743
A + FE ADA A K NG L G+A+ ++ A RP A +R S G+
Sbjct: 51 AFITFENPADAKNAAKDMNGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSR--NRSPSGS 108
Query: 744 IRNNPKRGGG 773
+R+ GG
Sbjct: 109 LRSARGSSGG 118
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
A V ER DAV+A++ + G+ M++QL+TS + T
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRT 152
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 174
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 181 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 217
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG G GG N D ++ +N
Sbjct: 203 GGGRGDGFGGNDNFGRGGNFSGRGG-FGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC060828-1|AAH60828.1| 593|Homo sapiens AT rich interactive domain
3A (BRIGHT-like) protein.
Length = 593
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 759 KRGGGGIRNQSNSGARGGNXXXRGG 833
K GGGG + SN+G RGGN GG
Sbjct: 549 KGGGGGGSSSSNAGGRGGNTGTSGG 573
>BC033163-1|AAH33163.1| 443|Homo sapiens ARID3A protein protein.
Length = 443
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 759 KRGGGGIRNQSNSGARGGNXXXRGG 833
K GGGG + SN+G RGGN GG
Sbjct: 399 KGGGGGGSSSSNAGGRGGNTGTSGG 423
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
A V ER DAV+A++ + G+ M++QL+TS + T
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRT 152
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI----NTLRPEARNRIGGASVGGT 743
A + FE ADA A K NG L G+A+ ++ A RP A +R S G+
Sbjct: 51 AFITFENPADAKNAAKDMNGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSR--NRSPSGS 108
Query: 744 IRNNPKRGGG 773
+R+ GG
Sbjct: 109 LRSARGSSGG 118
>BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein.
Length = 161
Score = 32.7 bits (71), Expect = 1.8
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI----NTLRPEARNRIGGASVGGT 743
A FE ADA A K G PLDG+A+ ++ A RP A +R S G
Sbjct: 51 AFTTFENTADAKNAAKHMIGKPLDGKAIKVEQAKKPSFQSGGRQRPPASSR--SRSPSGC 108
Query: 744 IRNNPKRGGGGIR--NQSNSGARGGNXXXRGG 833
+R + + GG R + S+ G G + G
Sbjct: 109 LR-SARGSSGGTRGWHPSHEGRLGNVLKCKDG 139
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
A V ER DAV+A++ + G+ M++QL+TS + T
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRT 152
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
A V ER DAV+A++ + G+ M++QL+TS + T
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRT 152
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
A V ER DAV+A++ + G+ M++QL+TS + T
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRT 152
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 110 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 148
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 155 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 191
>AY152547-1|AAN74028.1| 593|Homo sapiens E2F binding protein
protein.
Length = 593
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 759 KRGGGGIRNQSNSGARGGNXXXRGG 833
K GGGG + SN+G RGGN GG
Sbjct: 549 KGGGGGGSSSSNAGGRGGNTGTSGG 573
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GGG G F N GRGG R GG G GG N D ++ +N
Sbjct: 203 GGGRGDGFGGNDNFGRGGNFSGRGG-FGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 392 DFGERKLQRNS 424
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 32.7 bits (71), Expect = 1.8
Identities = 26/112 (23%), Positives = 49/112 (43%)
Frame = +2
Query: 227 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGER 406
R+ + R+G G+G + + R R+ ++S +YSR D H + R
Sbjct: 12 RESRSASRSGSAHGSGKSARHTPAKSRSRSHRR-SRSRSYSR-DYRRRHSHS-HSPMSTR 68
Query: 407 KLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 562
+ + L V L ++ D++E+FS++G + S+ YD+ R
Sbjct: 69 RRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSR 120
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 154
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 161 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 197
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 154
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 161 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 197
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 174
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 181 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 217
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 174
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 181 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 217
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 174
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 181 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 217
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 174
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 181 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 217
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 174
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 181 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 217
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 96 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 134
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 141 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 177
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 174
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 181 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 217
>AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protein 1
isoform 4 variant protein.
Length = 303
Score = 32.7 bits (71), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 559
P +L VSN+ F D D++++F +FG + + ++ G
Sbjct: 157 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG 195
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 202 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 238
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLD+ V +KE+FS G++ A + D+ G+S
Sbjct: 46 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKS 83
>U88047-1|AAC32888.1| 593|Homo sapiens DNA binding protein homolog
protein.
Length = 593
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 759 KRGGGGIRNQSNSGARGGNXXXRGG 833
K GGGG + SN+G RGGN GG
Sbjct: 549 KGGGGGGGSSSNAGGRGGNTGTSGG 573
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLD+ V +KE+FS G++ A + D+ G+S
Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKS 242
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 356 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 396
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 366 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 406
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 422 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 562
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLD+ V +KE+FS G++ A + D+ G+S
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKS 243
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 422 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 562
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 356 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 396
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 422 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 562
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLD+ V +KE+FS G++ A + D+ G+S
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKS 243
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 332 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 372
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLXY 574
L + NLD V++SD++ F FG++ + G++ Y
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTY 416
>AF039850-1|AAC69994.1| 593|Homo sapiens dead ringer like 1 protein
protein.
Length = 593
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 759 KRGGGGIRNQSNSGARGGNXXXRGG 833
K GGGG + SN+G RGGN GG
Sbjct: 549 KGGGGGGGSSSNAGGRGGNTGTSGG 573
>AC005391-1|AAC28918.1| 363|Homo sapiens DRIL1 DNA binding protein
homolog, partial CDS protein.
Length = 363
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 759 KRGGGGIRNQSNSGARGGNXXXRGG 833
K GGGG + SN+G RGGN GG
Sbjct: 319 KGGGGGGGSSSNAGGRGGNTGTSGG 343
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 452 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
+ V+NLD+ V +KE+FS G++ A + D+ G+S
Sbjct: 106 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKS 143
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 422 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 562
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
>S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein
protein.
Length = 195
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 325
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 103 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 140
>BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 277 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 309
>AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 277 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 309
>AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ38696 fis, clone KIDNE2001931, highly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN G. ).
Length = 378
Score = 31.9 bits (69), Expect = 3.1
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Frame = +3
Query: 591 ERKADAVKAMKQYNGVPLDGRAMNIQLATS-EINTLR----PEARNR------IGGASVG 737
E ADA A + NG LDG+A+ ++ AT + R P R+R GG
Sbjct: 44 ESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGS 103
Query: 738 GTIRNNPKRGG----GGI-RNQSNSGARGGNXXXRG 830
G R P RGG GG N + S +RG RG
Sbjct: 104 GGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRG 139
>AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens
cDNA FLJ20317 fis, clone HEP08678. ).
Length = 431
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 114 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 146
>AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 586
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 594
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementation
factor related protein protein.
Length = 569
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 252 AFVHFSNRKDAVEAMKALNGKVLDGSPIEVTLA 284
>AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNRKDAVEAMKALNGKVLDGSPIEVTLA 301
>AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 AFVHFSNRKDAVEAMKALNGKVLDGSPIEVTLA 301
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI----NTLRPEARNRIGGASVGGT 743
A + FE ADA A K NG L G+A+ ++ A RP A +R S G+
Sbjct: 51 AFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSR--NRSPSGS 108
Query: 744 IRN-NPKRGG 770
+R+ RGG
Sbjct: 109 LRSARGSRGG 118
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI----NTLRPEARNRIGGASVGGT 743
A + FE ADA A K NG L G+A+ ++ A RP A +R S G+
Sbjct: 51 AFITFENPADAKNAAKDMNGKSLHGKAIKVEQAQKPSFQSGGRRRPPASSR--NRSPSGS 108
Query: 744 IRN-NPKRGG 770
+R+ RGG
Sbjct: 109 LRSARGSRGG 118
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 392 DFGERKLQRNS 424
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 392 DFGERKLQRNS 424
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein.
Length = 189
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 85 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 141
Query: 392 DFGERKLQRNS 424
DFG Q+ S
Sbjct: 142 DFGNYSGQQQS 152
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 576 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI----NTLRPEARNRIGGASVGGT 743
A + FE ADA A K NG L G+A+ ++ A RP A +R S G+
Sbjct: 51 AFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSR--NRSPSGS 108
Query: 744 IRN-NPKRGG 770
+R+ RGG
Sbjct: 109 LRSARGSRGG 118
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 392 DFGERKLQRNS 424
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 212 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 391
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 392 DFGERKLQRNS 424
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>BC013115-1|AAH13115.1| 358|Homo sapiens RBM9 protein protein.
Length = 358
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT 692
V FE ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 137 VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 173
>AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spliced
product protein.
Length = 248
Score = 31.1 bits (67), Expect = 5.5
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +3
Query: 597 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGG 776
+ D++K Y+G L R++ + +A + R GG G + RGG
Sbjct: 91 EVDSLKEALTYDGALLGDRSLRVDIAEGRKQD-KGGFGFRKGGPDDRGMGSSRESRGGWD 149
Query: 777 IRNQSNSGARGGNXXXRGGA 836
R+ NSG R RGG+
Sbjct: 150 SRDDFNSGFRDDFLGGRGGS 169
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N + D +K+LF +FG S V D SG+S
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS 205
>X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein.
Length = 389
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
PT L +SNL + + +++ + FG + S + D SG S
Sbjct: 107 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTS 147
>X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein.
Length = 372
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
PT L +SNL + + +++ + FG + S + D SG S
Sbjct: 107 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTS 147
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 446 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
T + + N + D +K+LF +FG S V D SG+S
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS 230
>U36619-1|AAC16921.1| 176|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 176
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 582 VVFERKADAVKAMKQYNGVPLDGRAMNIQLA 674
++FE ADA A + NG LDG+ + ++ A
Sbjct: 48 IIFENAADAKNAARDMNGKSLDGKEIKVEQA 78
>D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein.
Length = 285
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 443 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 565
PT L +SNL + + +++ + FG + S + D SG S
Sbjct: 6 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTS 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,815,397
Number of Sequences: 237096
Number of extensions: 2376125
Number of successful extensions: 8660
Number of sequences better than 10.0: 290
Number of HSP's better than 10.0 without gapping: 5608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8065
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -