Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M24
         (962 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.8  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = -3

Query: 957 GPXGGFXGGGXXXXFLXSXGGGPPPXXGGXXFXXXXXGGGXXG 829
           G  GG  GGG     + S G G     GG        GGG  G
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIG 693


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 611 GGXFXXPPPPPP 646
           GG    PPPPPP
Sbjct: 525 GGPLGPPPPPPP 536



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = -2

Query: 712 PPPXGGXTPPXPPXXXXXXFLXGGX-GGGXXKTPPXP 605
           PPP     PP PP       L GG  GG     PP P
Sbjct: 581 PPPA---PPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 22.2 bits (45), Expect(2) = 3.8
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 630 PPPXPPXKKXXXXXXGGXGGVXPP 701
           PP  PP         GG  G  PP
Sbjct: 589 PPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 20.6 bits (41), Expect(2) = 3.8
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 594 PPPXGXGGVFXXPPPXPP 647
           PPP   G V   PP   P
Sbjct: 532 PPPPPGGAVLNIPPQFLP 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,223
Number of Sequences: 2352
Number of extensions: 15262
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)