Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M22
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 279 3e-75
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 279 3e-75
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 279 3e-75
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 277 1e-74
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 252 3e-67
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 252 3e-67
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 250 8e-67
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 250 8e-67
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 250 8e-67
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 249 2e-66
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 246 2e-65
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 246 2e-65
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 232 2e-61
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 230 9e-61
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 211 4e-55
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 186 1e-47
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 140 2e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 139 3e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 138 4e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 136 2e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 136 2e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 1e-31
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 119 3e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 119 3e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 75 9e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 75 9e-14
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.63
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 29 3.4
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.5
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.5
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.5
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 279 bits (683), Expect = 3e-75
Identities = 120/139 (86%), Positives = 133/139 (95%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 61.7 bits (143), Expect = 7e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKK+KLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC+FMVDNEAIYDICRR
Sbjct: 197 HSDCSFMVDNEAIYDICRR 215
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLDIERP+YTNLNRLIG VSS AS
Sbjct: 216 NLDIERPSYTNLNRLIGQIVSSITAS 241
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 279 bits (683), Expect = 3e-75
Identities = 120/139 (86%), Positives = 133/139 (95%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 61.7 bits (143), Expect = 7e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKK+KLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC+FMVDNEAIYDICRR
Sbjct: 197 HSDCSFMVDNEAIYDICRR 215
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLDIERP+YTNLNRLIG VSS AS
Sbjct: 216 NLDIERPSYTNLNRLIGQIVSSITAS 241
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 279 bits (683), Expect = 3e-75
Identities = 120/139 (86%), Positives = 133/139 (95%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 61.7 bits (143), Expect = 7e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKK+KLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC+FMVDNEAIYDICRR
Sbjct: 197 HSDCSFMVDNEAIYDICRR 215
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLDIERP+YTNLNRLIG VSS AS
Sbjct: 216 NLDIERPSYTNLNRLIGQIVSSITAS 241
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 277 bits (678), Expect = 1e-74
Identities = 119/138 (86%), Positives = 132/138 (95%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 327 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 506
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 507 IRKLADQCTGLQGFLIFH 560
IR+LAD CTGLQGFL+FH
Sbjct: 121 IRRLADNCTGLQGFLVFH 138
Score = 61.7 bits (143), Expect = 7e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKK+KLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 159 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 187
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC+FMVDNEAIYDICRR
Sbjct: 196 HSDCSFMVDNEAIYDICRR 214
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLDIERP+YTNLNRLIG VSS AS
Sbjct: 215 NLDIERPSYTNLNRLIGQIVSSITAS 240
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 252 bits (616), Expect = 3e-67
Identities = 109/139 (78%), Positives = 127/139 (91%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDCAFMVDNEAIYDICRR
Sbjct: 195 HSDCAFMVDNEAIYDICRR 213
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLD+ERP+YTNLNR+I VSS AS
Sbjct: 214 NLDVERPSYTNLNRIISQVVSSITAS 239
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 252 bits (616), Expect = 3e-67
Identities = 109/139 (78%), Positives = 127/139 (91%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDCAFMVDNEAIYDICRR
Sbjct: 195 HSDCAFMVDNEAIYDICRR 213
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLD+ERP+YTNLNR+I VSS AS
Sbjct: 214 NLDVERPSYTNLNRIISQVVSSITAS 239
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 250 bits (613), Expect = 8e-67
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDCAFMVDNEAIYDICRR
Sbjct: 195 HSDCAFMVDNEAIYDICRR 213
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NL ++RP+YTNLNR+I VSS AS
Sbjct: 214 NLSVDRPSYTNLNRIISQVVSSITAS 239
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 250 bits (613), Expect = 8e-67
Identities = 107/139 (76%), Positives = 125/139 (89%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
R+R+L ++C LQGFLIFH
Sbjct: 121 RVRRLTERCQSLQGFLIFH 139
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/29 (79%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKK+KLEF+IYPAPQ+ST++VEPYNS+
Sbjct: 160 DYGKKAKLEFSIYPAPQISTSMVEPYNSL 188
Score = 34.3 bits (75), Expect = 0.12
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICR 787
HSDC+F++DNEAIY+I +
Sbjct: 197 HSDCSFIMDNEAIYEITK 214
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NL + PTYT+LNRL+ VSS AS
Sbjct: 216 NLGVRSPTYTHLNRLLAQVVSSITAS 241
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 250 bits (613), Expect = 8e-67
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKLEF+IYPAPQV TAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVCTAVVEPYNSI 186
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDCAFMVDNEAIYDICRR
Sbjct: 195 HSDCAFMVDNEAIYDICRR 213
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NL ++RP+YTNLNR+I VSS AS
Sbjct: 214 NLSVDRPSYTNLNRIISQVVSSITAS 239
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 249 bits (610), Expect = 2e-66
Identities = 106/140 (75%), Positives = 125/140 (89%)
Frame = +3
Query: 141 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 320
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 321 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 500
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 501 DRIRKLADQCTGLQGFLIFH 560
DR+R+L + C GLQGFL+FH
Sbjct: 125 DRVRRLVENCRGLQGFLVFH 144
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKLEF IYPAPQVST++VEPYNSI
Sbjct: 165 DYGKKSKLEFCIYPAPQVSTSMVEPYNSI 193
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC+FMVDNEAIYDICRR
Sbjct: 202 HSDCSFMVDNEAIYDICRR 220
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLD+ RPTYTNLNRLI +SS AS
Sbjct: 221 NLDLARPTYTNLNRLIAQVISSVTAS 246
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 246 bits (601), Expect = 2e-65
Identities = 106/139 (76%), Positives = 125/139 (89%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDCAFMVDNEAIYDIC+R
Sbjct: 195 HSDCAFMVDNEAIYDICKR 213
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLD++RP+YTNLNR+I VSS AS
Sbjct: 214 NLDVDRPSYTNLNRIISQVVSSITAS 239
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 246 bits (601), Expect = 2e-65
Identities = 106/139 (76%), Positives = 125/139 (89%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKLEF+IYPAPQVSTAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDCAFMVDNEAIYDIC+R
Sbjct: 195 HSDCAFMVDNEAIYDICKR 213
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLD++RP+YTNLNR+I VSS AS
Sbjct: 214 NLDVDRPSYTNLNRIISQVVSSITAS 239
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 232 bits (568), Expect = 2e-61
Identities = 102/139 (73%), Positives = 117/139 (84%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIR+LA+ C GLQGF +FH
Sbjct: 118 RIRRLANNCEGLQGFFVFH 136
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
+YGKKSKLEF+IYPAPQ+ST+VVEPYNSI
Sbjct: 157 EYGKKSKLEFSIYPAPQISTSVVEPYNSI 185
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC+FMVDNEAIYDICRR
Sbjct: 194 HSDCSFMVDNEAIYDICRR 212
Score = 35.5 bits (78), Expect = 0.051
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NL + RPTY NLNR+I VSS AS
Sbjct: 213 NLRVSRPTYNNLNRIISQVVSSITAS 238
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 230 bits (563), Expect = 9e-61
Identities = 100/138 (72%), Positives = 118/138 (85%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 327 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 506
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 507 IRKLADQCTGLQGFLIFH 560
+++LA+ C GLQGF+IFH
Sbjct: 128 VKRLAENCNGLQGFVIFH 145
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
+YGKK KLEFAIYPAPQVST++VEPYNSI
Sbjct: 166 EYGKKPKLEFAIYPAPQVSTSMVEPYNSI 194
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC FMVDNEAIYDICRR
Sbjct: 203 HSDCTFMVDNEAIYDICRR 221
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLD+ RPTYTNLNRL+ +SS AS
Sbjct: 222 NLDLARPTYTNLNRLVAQIISSITAS 247
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 211 bits (516), Expect = 4e-55
Identities = 90/138 (65%), Positives = 110/138 (79%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 327 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 506
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 507 IRKLADQCTGLQGFLIFH 560
IRK + C GLQGFL+FH
Sbjct: 125 IRKQTENCEGLQGFLVFH 142
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/29 (82%), Positives = 29/29 (100%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
++GKKSKLEF++YPAPQVST+VVEPYNSI
Sbjct: 163 EFGKKSKLEFSVYPAPQVSTSVVEPYNSI 191
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 737 SDCAFMVDNEAIYDICRR 790
SDC+FMVDNEAIYD+CR+
Sbjct: 201 SDCSFMVDNEAIYDLCRQ 218
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 795 LDIERPTYTNLNRLIGXXVSSXPAS 869
L +ERP+Y+NLNRLI VSS AS
Sbjct: 220 LHVERPSYSNLNRLIAQVVSSITAS 244
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 186 bits (454), Expect = 1e-47
Identities = 80/117 (68%), Positives = 98/117 (83%)
Frame = +3
Query: 210 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 389
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 390 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 560
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFH 117
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
+YGKK KLEFAIYPAPQVST++VEPYNSI
Sbjct: 138 EYGKKPKLEFAIYPAPQVSTSMVEPYNSI 166
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
HSDC FMVDNEAIYDICRR
Sbjct: 175 HSDCTFMVDNEAIYDICRR 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
NLD+ RPTYTNLNRL+ +SS AS
Sbjct: 194 NLDLARPTYTNLNRLVAQIISSITAS 219
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 140 bits (338), Expect = 2e-33
Identities = 67/139 (48%), Positives = 88/139 (63%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAEGCDCLQGFQLTH 137
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + F++ P+P+VS VVEPYN+
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
++D F +DNEA+YDIC R
Sbjct: 195 NTDETFCIDNEALYDICFR 213
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 139 bits (336), Expect = 3e-33
Identities = 67/139 (48%), Positives = 89/139 (64%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
IRK A+ C LQGF + H
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 649 FAIYPAPQVSTAVVEPYNS 705
F++ P+P+VS VVEPYN+
Sbjct: 167 FSVVPSPKVSDTVVEPYNA 185
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
++D + +DNEA+YDIC R
Sbjct: 195 NTDETYCIDNEALYDICYR 213
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 138 bits (335), Expect = 4e-33
Identities = 67/139 (48%), Positives = 89/139 (64%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
IRK A+ C LQGF + H
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + F++ P+P+VS VVEPYN+
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
++D + +DNEA+YDIC R
Sbjct: 195 NTDETYCIDNEALYDICYR 213
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 136 bits (330), Expect = 2e-32
Identities = 65/139 (46%), Positives = 88/139 (63%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ LQGF + H
Sbjct: 119 VVRKEAESTDCLQGFQLTH 137
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + F++ P+P+VS VVEPYN+
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
++D F +DNEA+YDIC R
Sbjct: 195 NTDSTFCIDNEALYDICFR 213
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 136 bits (330), Expect = 2e-32
Identities = 65/139 (46%), Positives = 88/139 (63%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ LQGF + H
Sbjct: 119 VVRKEAESTDCLQGFQLTH 137
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + F++ P+P+VS VVEPYN+
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
++D F +DNEA+YDIC R
Sbjct: 195 NTDSTFCIDNEALYDICFR 213
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (323), Expect = 1e-31
Identities = 64/139 (46%), Positives = 84/139 (60%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAESCDCLQGFQMTH 137
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + + F++ P+P+VS VVEPYN+
Sbjct: 158 EYPDRIMMTFSVVPSPKVSDTVVEPYNA 185
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
++D F +DNEA+YDIC R
Sbjct: 195 NTDETFCIDNEALYDICFR 213
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 119 bits (286), Expect = 3e-27
Identities = 59/139 (42%), Positives = 83/139 (59%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
IR+ A+ L+GF + H
Sbjct: 119 VIRREAEAADSLEGFQLIH 137
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
+Y K+ +I P+ +VS VVEPYN+I
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 119 bits (286), Expect = 3e-27
Identities = 59/139 (42%), Positives = 83/139 (59%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
IR+ A+ L+GF + H
Sbjct: 119 VIRREAEAADSLEGFQLIH 137
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
+Y K+ +I P+ +VS VVEPYN+I
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 74.5 bits (175), Expect = 9e-14
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Frame = +3
Query: 156 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 335
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 336 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 506
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 507 IRKLADQCTGLQGFLIFH 560
I + A+ L G L H
Sbjct: 124 IIREAENTNNLDGILFTH 141
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 74.5 bits (175), Expect = 9e-14
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Frame = +3
Query: 156 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 335
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 336 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 506
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 507 IRKLADQCTGLQGFLIFH 560
I + A+ L G L H
Sbjct: 124 IIREAENTNNLDGILFTH 141
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 172 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 327
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 654 HLPRASGFHCRRRALQLYPHHPHNP 728
H P SG+H + YP+HP NP
Sbjct: 411 HEPAPSGYHPPQAQSNCYPNHPPNP 435
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 186 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 365
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 366 VDE 374
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 186 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 365
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 366 VDE 374
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 186 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 365
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 366 VDE 374
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 434 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 339
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,956,716
Number of Sequences: 27780
Number of extensions: 428185
Number of successful extensions: 1063
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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