Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M21
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.45 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   1.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   7.4  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 54  KKRKLTVVFLTCFIFKYILCVLAFF 128
           K  K T +F+TC +F  IL  ++FF
Sbjct: 125 KSYKRTQIFITCELFFVILLWISFF 149


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 413 IENENGTETLSTKTTAKPVIIPSDVPLPLIVER 511
           +   N T  +  +  AKPV    D P P +++R
Sbjct: 504 VATPNDTSLVRGRLVAKPVADARDAPAPFLLKR 536


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 879 YSGWEKVPLISGPTPNTT 826
           YSGWE   L + P PN T
Sbjct: 273 YSGWEGQVLENMPQPNLT 290


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 790  TTKALFTEISTNGSIGSWPTDQRHLLPAAIL 882
            TT+   T  +T  +  +WPT    + P A++
Sbjct: 1062 TTRPTTTSTTTRPTTTNWPTQGTTIPPPAVV 1092



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 585  PPWSRKPPTKEEI 623
            PP S KPP  EE+
Sbjct: 1379 PPTSEKPPLPEEL 1391


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 585 PPWSRKPPTKEEIDDAV 635
           PP  +  PTKE++ DA+
Sbjct: 328 PPCGQLDPTKEKLYDAI 344


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 131 IEKSQNT*DIFKNKTSQKHN 72
           I++S N+ + F NKT   HN
Sbjct: 561 IDESSNSSNYFANKTYDFHN 580


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,668
Number of Sequences: 336
Number of extensions: 4485
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)