Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M21
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094921-1|BAC04456.1|  128|Homo sapiens protein ( Homo sapiens ...    32   3.2  
BC032586-1|AAH32586.1|  363|Homo sapiens MXD3 protein protein.         31   5.6  

>AK094921-1|BAC04456.1|  128|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37602 fis, clone BRCOC2009380. ).
          Length = 128

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = -1

Query: 843 PTPNTTIGAYLSKQGFSGVLSSIGSISEWLDVNPQWPPLSAPCWRGRLSSVASE 682
           P+P+ T G +  +QG S  + ++ S +EWLD     PP + P    RL S  +E
Sbjct: 31  PSPSRTAG-WRGEQGASWTVEAL-SATEWLDRGCVPPPAAGPGIPARLGSAGAE 82


>BC032586-1|AAH32586.1|  363|Homo sapiens MXD3 protein protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 371 PIVKSRGWR*VQRIWHIESAVIASGICGPHRS-RTRTPAAPG 249
           P+   R WR + R W +       G   P RS  TRT AAPG
Sbjct: 190 PLPAQRSWRWMWRAWCLGVRPSCCGASSPARSTATRTAAAPG 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,368,323
Number of Sequences: 237096
Number of extensions: 2691988
Number of successful extensions: 10412
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10397
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)