Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M21
         (885 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    27   0.23 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.93 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    24   2.1  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    24   2.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 283 TGVVHVHRLHQGRTLRASGRTLHRGKSKGNSSCINYLNNHSHKRSI 146
           TG+V +  + +   L    +     K K + S +N +NNH +KRS+
Sbjct: 415 TGIVQISNMTEYNGLTEPKKD---NKRKLSDSTMNKINNHEYKRSV 457


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 603 PPTKEEIDDAVLKGKAALKELIKVENLRKPL 695
           PP  +E+DD  L G    KE+ K   L KPL
Sbjct: 690 PPQVDEVDDKELSGAEEEKEVEKA--LLKPL 718


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 232 SGRTLHRGKSKGNSSCINYLNNHSHKRSIIN 140
           S  T+H    K N +  NY NN+ +K+   N
Sbjct: 85  SNNTIHNNNYKYNYNNNNYNNNNYNKKLYYN 115


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 232 SGRTLHRGKSKGNSSCINYLNNHSHKRSIIN 140
           S  T+H    K N +  NY NN+ +K+   N
Sbjct: 85  SNNTIHNNNYKYNYNNNNYNNNNYNKKLYYN 115


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 537 KDGETAVRFLSTIRGSGT 484
           +DGET  RF+S IR   T
Sbjct: 342 EDGETKSRFISGIRSEQT 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,869
Number of Sequences: 438
Number of extensions: 4978
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)