Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M19
         (921 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...   164   3e-40
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.    164   3e-40
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...   164   3e-40
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...   164   3e-40
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...   164   3e-40
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...   164   3e-40
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...   159   2e-38
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.      140   5e-33
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...   134   4e-31
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    72   3e-12

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  164 bits (399), Expect = 3e-40
 Identities = 72/84 (85%), Positives = 75/84 (89%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 264
           MPLA DLLHPSP  E RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 265 TILCQPTGGRARLTEGCSFRRKQH 336
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score =  164 bits (399), Expect = 3e-40
 Identities = 72/84 (85%), Positives = 75/84 (89%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 264
           MPLA DLLHPSP  E RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 265 TILCQPTGGRARLTEGCSFRRKQH 336
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  164 bits (399), Expect = 3e-40
 Identities = 72/84 (85%), Positives = 75/84 (89%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 264
           MPLA DLLHPSP  E RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 265 TILCQPTGGRARLTEGCSFRRKQH 336
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  164 bits (399), Expect = 3e-40
 Identities = 72/84 (85%), Positives = 75/84 (89%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 264
           MPLA DLLHPSP  E RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 265 TILCQPTGGRARLTEGCSFRRKQH 336
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  164 bits (399), Expect = 3e-40
 Identities = 72/84 (85%), Positives = 75/84 (89%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 264
           MPLA DLLHPSP  E RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 265 TILCQPTGGRARLTEGCSFRRKQH 336
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  164 bits (399), Expect = 3e-40
 Identities = 72/84 (85%), Positives = 75/84 (89%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 264
           MPLA DLLHPSP  E RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 265 TILCQPTGGRARLTEGCSFRRKQH 336
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score =  159 bits (385), Expect = 2e-38
 Identities = 70/84 (83%), Positives = 74/84 (88%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 264
           MPLA DLLHPS   E +KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 265 TILCQPTGGRARLTEGCSFRRKQH 336
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score =  140 bits (340), Expect = 5e-33
 Identities = 64/90 (71%), Positives = 70/90 (77%)
 Frame = +1

Query: 52  GFSXLCIKAVTMPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSH 231
           G   + I    + LA DLLHPS   E +KHK KRLV  PNSYFMDVKCPGCYKITTVFSH
Sbjct: 6   GLKLIVIICFFVQLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSH 65

Query: 232 AQRVVVCAGCSTILCQPTGGRARLTEGCSF 321
           AQ VV+C GCST+LCQPTGG+ARLTEG SF
Sbjct: 66  AQTVVLCVGCSTVLCQPTGGKARLTEGISF 95


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score =  134 bits (324), Expect = 4e-31
 Identities = 58/69 (84%), Positives = 61/69 (88%)
 Frame = +1

Query: 100 DLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQ 279
           DLLHPSP  E RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQ
Sbjct: 1   DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60

Query: 280 PTGGRARLT 306
           PTGG+ARLT
Sbjct: 61  PTGGKARLT 69


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 72.1 bits (169), Expect = 3e-12
 Identities = 32/39 (82%), Positives = 32/39 (82%)
 Frame = +1

Query: 85  MPLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPG 201
           MPLA DLLHPSP  E RKHK KRLV  PNSYFMDVKCPG
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,010,015
Number of Sequences: 237096
Number of extensions: 1236782
Number of successful extensions: 2959
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2959
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)