Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M17
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   3.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   3.2  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 406 YDTRIVLKVYKYSITPSERFPLPDD 332
           Y   +VL    YS+   E F  PDD
Sbjct: 4   YACLLVLSALIYSVLGQENFKCPDD 28


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 406 YDTRIVLKVYKYSITPSERFPLPDD 332
           Y   +VL    YS+   E F  PDD
Sbjct: 4   YACLLVLSALIYSVLGQENFKCPDD 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,134
Number of Sequences: 336
Number of extensions: 3444
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)