Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M17
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 214 3e-55
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 214 4e-55
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 214 4e-55
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 214 4e-55
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 214 4e-55
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 214 4e-55
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 214 4e-55
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 214 4e-55
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 104 5e-22
AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-bindin... 31 5.6
AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265... 31 5.6
BC114476-1|AAI14477.1| 785|Homo sapiens ANKRD28 protein protein. 30 9.9
BC113868-1|AAI13869.1| 782|Homo sapiens ANKRD28 protein protein. 30 9.9
BC106948-1|AAI06949.2| 785|Homo sapiens ANKRD28 protein protein. 30 9.9
AK126888-1|BAC86737.1| 687|Homo sapiens protein ( Homo sapiens ... 30 9.9
AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein. 30 9.9
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (523), Expect = 3e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVI 82
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 214 bits (522), Expect = 4e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 214 bits (522), Expect = 4e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 214 bits (522), Expect = 4e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (522), Expect = 4e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (522), Expect = 4e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 214 bits (522), Expect = 4e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 17 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 76
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125
Score = 35.5 bits (78), Expect = 0.26
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 109 GGSAGAKFRISLGLPXGS 162
GGS+GAKFRISLGLP G+
Sbjct: 1 GGSSGAKFRISLGLPVGA 18
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (522), Expect = 4e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 104 bits (249), Expect = 5e-22
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = +2
Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 316
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 91 MSKRGRGGSAGAKFRISLGLPXGS 162
MSKRGRGGS+GAKFRISLGLP G+
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGA 24
>AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 330
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +1
Query: 85 NKMSKRGRGGSAGAKFRISLGLPXGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFR 264
++ S R R S G+K R S GSS+ +R + S +R + RS ++G R +
Sbjct: 241 SRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKK 300
Query: 265 GHDCGHSQKG*T*TPEKGNAGSGHQAAETVQK 360
S + + ++GS H + + K
Sbjct: 301 RRTRSRSPE----RRHRSSSGSSHSGSRSSSK 328
>AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 330
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +1
Query: 85 NKMSKRGRGGSAGAKFRISLGLPXGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFR 264
++ S R R S G+K R S GSS+ +R + S +R + RS ++G R +
Sbjct: 241 SRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKK 300
Query: 265 GHDCGHSQKG*T*TPEKGNAGSGHQAAETVQK 360
S + + ++GS H + + K
Sbjct: 301 RRTRSRSPE----RRHRSSSGSSHSGSRSSSK 328
>BC114476-1|AAI14477.1| 785|Homo sapiens ANKRD28 protein protein.
Length = 785
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 125 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 262
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 351 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 396
>BC113868-1|AAI13869.1| 782|Homo sapiens ANKRD28 protein protein.
Length = 782
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 125 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 262
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 348 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 393
>BC106948-1|AAI06949.2| 785|Homo sapiens ANKRD28 protein protein.
Length = 785
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 125 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 262
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 351 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 396
>AK126888-1|BAC86737.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ44940 fis, clone BRAMY4000915, weakly similar
to Ankyrin 1. ).
Length = 687
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 125 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 262
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 351 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 396
>AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein.
Length = 1059
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 125 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 262
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 324 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 369
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,677,746
Number of Sequences: 237096
Number of extensions: 2107064
Number of successful extensions: 4230
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4230
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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