Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M17
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA...   222   6e-58
M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal prot...   207   1e-53
Z46891-1|CAA86993.1|  828|Drosophila melanogaster Calpain protein.     30   3.7  
X78555-2|CAA55298.1|  828|Drosophila melanogaster calpain protein.     30   3.7  
X78555-1|CAA55297.1|  805|Drosophila melanogaster calpain protein.     30   3.7  
AY051678-1|AAK93102.1|  828|Drosophila melanogaster LD22862p pro...    30   3.7  
AE013599-2880|AAF57563.1|  828|Drosophila melanogaster CG7563-PB...    30   3.7  
U43733-1|AAA86639.1|  904|Drosophila melanogaster Abrupt protein.      29   6.5  
BT003807-1|AAO41490.1|  369|Drosophila melanogaster AT11330p pro...    29   6.5  
BT001583-1|AAN71338.1|  894|Drosophila melanogaster RE25924p pro...    29   6.5  
AY058367-1|AAL13596.1|  378|Drosophila melanogaster GH13802p pro...    29   6.5  
AE014298-3055|AAF50879.1|  378|Drosophila melanogaster CG1314-PA...    29   6.5  
AE014134-2051|AAN10774.1|  894|Drosophila melanogaster CG4807-PB...    29   6.5  
AE014134-2050|AAF53087.2|  904|Drosophila melanogaster CG4807-PA...    29   6.5  
Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger...    29   8.6  
BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p pro...    29   8.6  
AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB...    29   8.6  
AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA...    29   8.6  

>AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA
           protein.
          Length = 140

 Score =  222 bits (542), Expect = 6e-58
 Identities = 104/109 (95%), Positives = 106/109 (97%)
 Frame = +2

Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
           GAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVI
Sbjct: 23  GAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVI 82

Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
           RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83  RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131



 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 91  MSKRGRGGSAGAKFRISLGLPXGS 162
           MSKRGRGG+AG KFRISLGLP G+
Sbjct: 1   MSKRGRGGTAGGKFRISLGLPVGA 24


>M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal protein
           L17A protein.
          Length = 140

 Score =  207 bits (506), Expect = 1e-53
 Identities = 98/109 (89%), Positives = 100/109 (91%)
 Frame = +2

Query: 158 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 337
           GAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM VATVKKGKPELRKKV      
Sbjct: 23  GAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVSVVPSA 82

Query: 338 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 484
           RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83  RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131



 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 91  MSKRGRGGSAGAKFRISLGLPXGS 162
           MSKRGRGG+AG KFRISLGLP G+
Sbjct: 1   MSKRGRGGTAGGKFRISLGLPVGA 24


>Z46891-1|CAA86993.1|  828|Drosophila melanogaster Calpain protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 24/87 (27%), Positives = 36/87 (41%)
 Frame = -3

Query: 481 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 302
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS   P  +      +F E 
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548

Query: 301 RFTLFDCGHNHVPGTGRRQSVQATFDT 221
           +  + +   +HV   G+  ++   F T
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGFPT 574


>X78555-2|CAA55298.1|  828|Drosophila melanogaster calpain protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 24/87 (27%), Positives = 36/87 (41%)
 Frame = -3

Query: 481 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 302
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS   P  +      +F E 
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548

Query: 301 RFTLFDCGHNHVPGTGRRQSVQATFDT 221
           +  + +   +HV   G+  ++   F T
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGFPT 574


>X78555-1|CAA55297.1|  805|Drosophila melanogaster calpain protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 24/87 (27%), Positives = 36/87 (41%)
 Frame = -3

Query: 481 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 302
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS   P  +      +F E 
Sbjct: 466 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 525

Query: 301 RFTLFDCGHNHVPGTGRRQSVQATFDT 221
           +  + +   +HV   G+  ++   F T
Sbjct: 526 QNNMEE-NDDHVGYGGKADTITPGFPT 551


>AY051678-1|AAK93102.1|  828|Drosophila melanogaster LD22862p
           protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 24/87 (27%), Positives = 36/87 (41%)
 Frame = -3

Query: 481 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 302
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS   P  +      +F E 
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548

Query: 301 RFTLFDCGHNHVPGTGRRQSVQATFDT 221
           +  + +   +HV   G+  ++   F T
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGFPT 574


>AE013599-2880|AAF57563.1|  828|Drosophila melanogaster CG7563-PB,
           isoform B protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 24/87 (27%), Positives = 36/87 (41%)
 Frame = -3

Query: 481 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEF 302
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS   P  +      +F E 
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSET 548

Query: 301 RFTLFDCGHNHVPGTGRRQSVQATFDT 221
           +  + +   +HV   G+  ++   F T
Sbjct: 549 QNNMEE-NDDHVGYGGKADTITPGFPT 574


>U43733-1|AAA86639.1|  904|Drosophila melanogaster Abrupt protein.
          Length = 904

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 396 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 226
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAG+L   RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842


>BT003807-1|AAO41490.1|  369|Drosophila melanogaster AT11330p
           protein.
          Length = 369

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 396 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 226
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAG+L   RPL
Sbjct: 250 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 307


>BT001583-1|AAN71338.1|  894|Drosophila melanogaster RE25924p
           protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 396 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 226
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAG+L   RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832


>AY058367-1|AAL13596.1|  378|Drosophila melanogaster GH13802p
           protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 456 PKNVLICGRVLPQTRAL*LEYTFKISNCVSLSFPSTSKSNPKNYNLRNRHLQCKC 620
           PK + +CG+ LP+ R          SNCV L    +  +  +N NL N +   +C
Sbjct: 178 PKVLKLCGKSLPEDRGK--------SNCVGLMIYESGNNATRNLNLPNIYKDWEC 224


>AE014298-3055|AAF50879.1|  378|Drosophila melanogaster CG1314-PA
           protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 456 PKNVLICGRVLPQTRAL*LEYTFKISNCVSLSFPSTSKSNPKNYNLRNRHLQCKC 620
           PK + +CG+ LP+ R          SNCV L    +  +  +N NL N +   +C
Sbjct: 178 PKVLKLCGKSLPEDRGK--------SNCVGLMIYESGNNATRNLNLPNIYKDWEC 224


>AE014134-2051|AAN10774.1|  894|Drosophila melanogaster CG4807-PB,
           isoform B protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 396 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 226
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAG+L   RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832


>AE014134-2050|AAF53087.2|  904|Drosophila melanogaster CG4807-PA,
           isoform A protein.
          Length = 904

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 396 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 226
           A+     N P  LL G F      AG   F  SG P LT+  IM  E AAG+L   RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842


>Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger
           protein protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 338 RQRKPFRRRDGVFIYFEDN 394
           R+R+P R+RDG F Y  DN
Sbjct: 72  RRRRPVRKRDGTFNYSADN 90


>BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p
           protein.
          Length = 608

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 338 RQRKPFRRRDGVFIYFEDN 394
           R+R+P R+RDG F Y  DN
Sbjct: 66  RRRRPVRKRDGTFNYSADN 84


>AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB,
           isoform B protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 338 RQRKPFRRRDGVFIYFEDN 394
           R+R+P R+RDG F Y  DN
Sbjct: 57  RRRRPVRKRDGTFNYSADN 75


>AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA,
           isoform A protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 338 RQRKPFRRRDGVFIYFEDN 394
           R+R+P R+RDG F Y  DN
Sbjct: 57  RRRRPVRKRDGTFNYSADN 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,667,078
Number of Sequences: 53049
Number of extensions: 677517
Number of successful extensions: 2098
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)