Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M16
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 303 LLVIFKMYLIPASHAHYVILVIE*VTYLVELMLCNGI 193
           LL+ F+  L   S  ++ + V++   + +E+ LCNGI
Sbjct: 638 LLITFQSGLNVVSCINFPLGVLDRGNFDIEIALCNGI 674


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 821 NFTNKAFFHCILVGVVXTHQCI 756
           +F  K   +CI+ G + T  CI
Sbjct: 31  SFPKKKLVYCIIFGAIATLTCI 52


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 821 NFTNKAFFHCILVGVVXTHQCI 756
           +F  K   +CI+ G + T  CI
Sbjct: 27  SFPKKKLVYCIIFGAIATLTCI 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,854
Number of Sequences: 336
Number of extensions: 2731
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)