Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M16
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0232 + 21559467-21559532,21559586-21560200                       29   6.6  
11_04_0398 + 17233630-17233790,17233987-17234071                       29   6.6  
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461...    29   6.6  

>11_06_0232 + 21559467-21559532,21559586-21560200
          Length = 226

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 691 ALPGPLEPKSTXPARGAPCRIANEALAETRRTQLRV 584
           + PG   P+ T   RG   R A +  A +R T LRV
Sbjct: 155 SFPGATTPQRTPDRRGRRARAAQQGEASSRATPLRV 190


>11_04_0398 + 17233630-17233790,17233987-17234071
          Length = 81

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 639 GAPRAGXVDFGSRGPGRALTPPG 707
           GA R+   DFGS G GRA T  G
Sbjct: 21  GAGRSAAPDFGSEGDGRAATAAG 43


>02_05_1224 + 35045268-35045270,35045735-35045863,35046037-35046180,
            35046306-35046451,35046583-35046739,35046838-35046896,
            35046978-35047137,35047716-35047865,35047969-35048105,
            35048186-35048332,35048428-35048540,35048880-35048971,
            35049637-35049738,35050108-35050145,35050255-35050381,
            35050462-35050632,35050721-35050852,35050929-35051038,
            35051118-35051178,35051386-35051427,35051756-35051933,
            35052043-35052248,35052843-35052962,35053138-35053182,
            35053310-35053408,35053846-35054058,35054254-35054393,
            35054469-35054583,35054684-35054722,35054816-35054899,
            35054969-35055139,35055891-35056100,35056193-35056378,
            35056473-35056601,35056679-35056749,35056834-35056933,
            35057016-35057072,35057778-35057834,35057940-35058020,
            35058256-35058338,35058448-35058562
          Length = 1572

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 589  GAESAASPPEPRSLFGRVRRG 651
            G+ S   PP+P SLFGR+ +G
Sbjct: 1261 GSVSRKKPPQPTSLFGRMAQG 1281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,179,836
Number of Sequences: 37544
Number of extensions: 271232
Number of successful extensions: 601
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)