Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M16
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46791-2|CAA86756.1|  283|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AC084152-9|AAK39313.1|  296|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z46791-2|CAA86756.1|  283|Caenorhabditis elegans Hypothetical
           protein C09G5.3 protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 604 ASPPEPRSLFGRVRRGQXRLTLAQEVQEEPLHPPG 708
           +SPP P  +FGR +R   +   ++E    P  PPG
Sbjct: 63  SSPPSPSLIFGRNKRSGDKCNCSEEPSNCPGGPPG 97


>Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical
           protein F15A2.1 protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 604 ASPPEPRSLFGRVRRGQXRLTLAQEVQEEPLHPPGXR 714
           A+PP  ++LFGR +R   +     + Q  P  PPG R
Sbjct: 72  AAPPNFKTLFGRHKRDNSQCHCGLQSQGCPDGPPGAR 108


>AC084152-9|AAK39313.1|  296|Caenorhabditis elegans Hypothetical
           protein Y102A11A.1 protein.
          Length = 296

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 470 SIILTSFKSYIISYLLDTKISXVY 399
           S ++  F  +I+S++LD K+S VY
Sbjct: 85  SFVILGFSIWILSFILDPKVSFVY 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,311,029
Number of Sequences: 27780
Number of extensions: 250236
Number of successful extensions: 458
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)