Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M14
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.78 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.8  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   3.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   4.2  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   5.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 417 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 512
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 17/66 (25%), Positives = 25/66 (37%)
 Frame = +2

Query: 533  GQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRATVSPTPCPSTRDTHSP 712
            GQ    DP+ V   +   H+  HP +A     R Y+      +  +   PCPS    +  
Sbjct: 903  GQYTTKDPNEVTCDEEEGHISYHPDKA---DCRMYYMCEGERKHHM---PCPSNLVFNPD 956

Query: 713  TPSCVW 730
               C W
Sbjct: 957  QNVCDW 962


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 287 GTRREEHHLLRNRP 246
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 294 SWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 416
           SW G   +   VG+    S++  +   K+ +    YP E+G
Sbjct: 36  SWPGRPPKRAPVGLSLAASHLQQQQLKKQRLDNGDYPYENG 76


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 287 GTRREEHHLLRNRP 246
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 287 GTRREEHHLLRNRP 246
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 386 PDPQIPHRTRNRH 424
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 678 HRAHLRGIRTPPRHPASGLSRSRP 749
           H+A +R +  PP+       RS P
Sbjct: 62  HKAPIRPVALPPKREIPSPKRSSP 85


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 501 RGVPRGRHAAHCRRYDAKSSP 439
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 455 MPNLLHVIPVSDDSVFD 405
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 455 MPNLLHVIPVSDDSVFD 405
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 455 MPNLLHVIPVSDDSVFD 405
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 455 MPNLLHVIPVSDDSVFD 405
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,532
Number of Sequences: 336
Number of extensions: 5063
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)