Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M14
(876 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 1e-64
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 1e-64
SB_56| Best HMM Match : Actin (HMM E-Value=0) 244 1e-64
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 244 1e-64
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 1e-64
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 2e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 110 1e-24
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 7e-24
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 106 2e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 97 2e-20
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 84 2e-16
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 1e-05
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 48 1e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_49291| Best HMM Match : Herpes_UL69 (HMM E-Value=4.5) 34 0.13
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.13
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.92
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.92
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 31 1.6
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 31 1.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 3.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_37909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_56014| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 29 6.5
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 6.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 244 bits (596), Expect = 1e-64
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 306 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 485
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 486 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Score = 108 bits (259), Expect = 7e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLM ILTERGYSFTTTAERE
Sbjct: 157 GDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 191 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 319
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+IVRDIKE LCYVALDFEQE
Sbjct: 208 EIVRDIKEKLCYVALDFEQE 227
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 244 bits (596), Expect = 1e-64
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 306 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 485
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 486 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Score = 109 bits (261), Expect = 4e-24
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM ILTERGYSFTTTAERE
Sbjct: 156 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 207
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 197 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 319
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+IVRDIKE L YVALDFEQE
Sbjct: 207 EIVRDIKEKLAYVALDFEQE 226
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 244 bits (596), Expect = 1e-64
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 306 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 485
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 486 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Score = 109 bits (261), Expect = 4e-24
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM ILTERGYSFTTTAERE
Sbjct: 156 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 207
Score = 88.2 bits (209), Expect = 8e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 197 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 319
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+IVRDIKE LCYVALDFEQE
Sbjct: 207 EIVRDIKEKLCYVALDFEQE 226
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 244 bits (596), Expect = 1e-64
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 306 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 485
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 486 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Score = 109 bits (261), Expect = 4e-24
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM ILTERGYSFTTTAERE
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +2
Query: 191 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 319
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+IVRDIKE LCYVALDFEQE
Sbjct: 208 EIVRDIKEKLCYVALDFEQE 227
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 244 bits (596), Expect = 1e-64
Identities = 113/119 (94%), Positives = 116/119 (97%)
Frame = +3
Query: 306 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 485
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 486 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +2
Query: 191 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 319
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+IVRDIKE LCYVALDFEQE
Sbjct: 181 EIVRDIKEKLCYVALDFEQE 200
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 745 DLTDYLMMILTERGYSFTTTAERE 816
D + + I ERGYSFTTTAERE
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAERE 181
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/17 (82%), Positives = 15/17 (88%), Gaps = 2/17 (11%)
Frame = +1
Query: 661 GDGVSHTVPIYE--GYA 705
GDGVSHTVPIYE GY+
Sbjct: 157 GDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 126 bits (305), Expect = 2e-29
Identities = 57/108 (52%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Frame = +3
Query: 342 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 518
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 519 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSG 160
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGV+H P+YEG+ALPH RLD+AGRD+T YL+ ++ RGY+F TA+ E
Sbjct: 160 GDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFE 211
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 209 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 307
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 110 bits (265), Expect = 1e-24
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = +3
Query: 444 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 623
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 624 ASGRTTGIVLDSG 662
ASGRTTG V D G
Sbjct: 2189 ASGRTTGTVFDCG 2201
Score = 87.0 bits (206), Expect = 2e-17
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL ++TERGYSF +TAE++
Sbjct: 2201 GDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQ 2252
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 215 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 316
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+I+RD+KE LCY A+D+E+E
Sbjct: 2252 QIIRDLKETLCYCAMDYERE 2271
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 108 bits (259), Expect = 7e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLM ILTERGYSFTTTAERE
Sbjct: 119 GDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAERE 170
Score = 100 bits (239), Expect = 2e-21
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +3
Query: 306 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 464
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 88.2 bits (209), Expect = 8e-18
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 197 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 319
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +3
Query: 537 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 119
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+IVRDIKE LCYVALDFEQE
Sbjct: 170 EIVRDIKEKLCYVALDFEQE 189
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 106 bits (255), Expect = 2e-23
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLM ++TERGYSFTTTAERE
Sbjct: 35 GDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAERE 86
Score = 66.1 bits (154), Expect = 4e-11
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +3
Query: 558 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSG
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSG 35
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 815 KIVRDIKEXLCYVALDFEQE 874
+IVRDIKE LCYVALDF QE
Sbjct: 86 EIVRDIKEKLCYVALDFYQE 105
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 96.7 bits (230), Expect = 2e-20
Identities = 40/57 (70%), Positives = 52/57 (91%)
Frame = +3
Query: 492 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 662
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+G
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAG 182
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/52 (55%), Positives = 44/52 (84%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTERGYSFTTTAERE 816
GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL ++L + G+ F +++E E
Sbjct: 182 GDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELE 233
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 83.8 bits (198), Expect = 2e-16
Identities = 34/87 (39%), Positives = 59/87 (67%)
Frame = +3
Query: 402 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 581
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 582 PAMYVAIQAVLSLYASGRTTGIVLDSG 662
PA ++ +VL+ +A+GR+ G+V+DSG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 682 VPIYEGYALPHAILRLDLAGRDLT 753
VP+++GY L AI+R LAG +T
Sbjct: 96 VPVHDGYVLQQAIVRSPLAGDFIT 119
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 200 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 316
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 330 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 509
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2
Query: 185 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 310
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 603 QAVLSLYASGRTTGIVLDSGRRC 671
Q LSLYASG T G+ L SG C
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSC 789
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +1
Query: 661 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMMILTER 783
GDGV+H +P+ EGY + I + +AGRD+T ++ +L ER
Sbjct: 69 GDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 7e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 313 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 197
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 447 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 626
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 627 SGRTTGIV 650
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49291| Best HMM Match : Herpes_UL69 (HMM E-Value=4.5)
Length = 491
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = -1
Query: 732 VQTQDGVGECVSLVDGHGVGDTVARSPARYRWYDRTRTARAR 607
V DGVG CV DG G D R P YDR R +R+R
Sbjct: 211 VDNDDGVGGCVDNDDGGGAADLQLRHPDP---YDRVRLSRSR 249
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 351 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 473
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 203 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 322
++A LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 33.1 bits (72), Expect = 0.30
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +3
Query: 198 TKKLPRW**TMAPVCARPVSQEMMLLAPCSPRSWEGPAIRXVMVGMGQKDS---YVGDEA 368
T+K P++ PV R ++ + L +P+++ + G+ DS VG++
Sbjct: 62 TRKNPQFEPGFEPVPQRWITVQGWLGNRQNPKTYVQELSGKIGGRKGEPDSGGLAVGNDI 121
Query: 369 QSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKAN 539
S I L+ P + +VT+++ E++ H F + P HPV++TE NP
Sbjct: 122 GSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYC 181
Query: 540 RE 545
R+
Sbjct: 182 RQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 288 GNTARGASSPAKPALHIPEPLSTT 217
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.92
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 534 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 650
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 288 GNTARGASSPAKPALHIPEPLSTT 217
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 583 PPCTSPSKPCSRCTRPVVPPVSCWTPGDGVSH 678
PP P P T P +PP SC +G S+
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASCMPTHEGTSN 1004
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 497 PRPAH*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRAT 667
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R +RA
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPRTYEQVRAH 763
Query: 668 V 670
+
Sbjct: 764 I 764
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 598 PSKPCSRCTRPVVP--PVSCWTPGDGVSHTVPIYEGYALPHAIL 723
P++PCS CT+P +P P C + D + +Y + + L
Sbjct: 220 PTEPCSLCTKPALPPEPKDCVSDPDDALYVERVYCAHVFHYGCL 263
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 288 GNTARGASSPAKPALHIPEPLSTT 217
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 518 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 610
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 255 SQEMMLLAPCSPRSWEGPAIRXVMVGMGQKDSYVGDEAQ 371
S E + APCSPRS P I M G G + S+V +E +
Sbjct: 803 SLESSIEAPCSPRSASKPVISGEMNG-GPRASHVIEETE 840
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 494 TPRPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRATVS 673
+PR SP+ + ++ P R + RR S + R R Y R S
Sbjct: 853 SPRDRRRRSPEHRRRREASPPRRDRKRYDSPPRRRRRSPSPPPRRRRRDSYSPSRRRRDS 912
Query: 674 PTPCPSTRDTH-SPTPS 721
PTP P R SP+PS
Sbjct: 913 PTPSPPPRRRRKSPSPS 929
>SB_37909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 599 HPSRALAVRVRSYHRYRAGLRATVSPTPCPSTRDTHSPTPSCVWT 733
HP+R L R + + + A R T PC DT P+ C WT
Sbjct: 33 HPTR-LETRTKESNIHLA--RKTSRDYPCAYAHDTDQPSDLCQWT 74
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 522 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 650
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_56014| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 300
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 99 SVSCFSRLAVTAGRLIFILSHLHLTNF-TNSRCATKKLPRW**TMAPVCARPVSQEMMLL 275
S+S + LAV+A R+I + HL T+ TN+R + W T+ C ++ ++L
Sbjct: 110 SISMVTLLAVSADRVIALYLHLRYTSIVTNNRVVKLHIIIWTVTVPFTCLSLLASHSVML 169
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 602 PSRALAVRVRSYHRYRAGLRA-TVSPTPCPSTRDTHSPTP 718
PSR ++++ R+ L A T++ P P + DT SPTP
Sbjct: 307 PSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 288 GNTARGASSPAKPALHIPEPLSTT 217
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 288 GNTARGASSPAKPALHIPEPLSTT 217
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,528,723
Number of Sequences: 59808
Number of extensions: 772887
Number of successful extensions: 2729
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2717
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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