Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M13
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.005
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.005
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.005
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 0.009
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.029
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.029
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.029
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.15
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.15
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 0.30
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.47
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 32 0.62
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.82
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 0.82
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.82
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 0.82
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 1.1
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 31 1.4
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 2.5
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical ... 29 3.3
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 29 4.4
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.4
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 5.8
U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast... 29 5.8
U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast... 29 5.8
U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast... 29 5.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 5.8
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 5.8
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.7
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 7.7
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 7.7
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 7.7
AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like ... 28 7.7
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 28 7.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.7
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 28 7.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 24 8.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 24 8.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/66 (36%), Positives = 26/66 (39%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP K G G PPP +P P P +PPP GG
Sbjct: 237 PPPPPPP---KGSPPLAGSGSPPPPPAAGSPPPPRTGSP----PPPPTGSPPPPPAGG-- 287
Query: 805 LSXDPP 822
S PP
Sbjct: 288 -SPPPP 292
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 631 PPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGXLS 810
PPPPP G PP P + SP P PPP G S
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRGSPPTGS 311
Query: 811 XDPP 822
PP
Sbjct: 312 LPPP 315
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Frame = +1
Query: 625 PPP----PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXG 792
PPP PPPP GG PP +P P P P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 324
Query: 793 GGGXLSXDPP 822
G G S PP
Sbjct: 325 GTG--SPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/66 (36%), Positives = 26/66 (39%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP K G G PPP +P P P +PPP GG
Sbjct: 258 PPPPPPP---KGSPPLAGSGSPPPPPAAGSPPPPRTGSP----PPPPTGSPPPPPAGG-- 308
Query: 805 LSXDPP 822
S PP
Sbjct: 309 -SPPPP 313
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 631 PPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGXLS 810
PPPPP G PP P + SP P PPP G S
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRGSPPTGS 332
Query: 811 XDPP 822
PP
Sbjct: 333 LPPP 336
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Frame = +1
Query: 625 PPP----PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXG 792
PPP PPPP GG PP +P P P P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 345
Query: 793 GGGXLSXDPP 822
G G S PP
Sbjct: 346 GTG--SPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/66 (36%), Positives = 26/66 (39%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP K G G PPP +P P P +PPP GG
Sbjct: 243 PPPPPPP---KGSPPLAGSGSPPPPPAAGSPPPPRTGSP----PPPPTGSPPPPPAGG-- 293
Query: 805 LSXDPP 822
S PP
Sbjct: 294 -SPPPP 298
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 631 PPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGXLS 810
PPPPP G PP P + SP P PPP G S
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRGSPPTGS 317
Query: 811 XDPP 822
PP
Sbjct: 318 LPPP 321
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Frame = +1
Query: 625 PPP----PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXG 792
PPP PPPP GG PP +P P P P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 330
Query: 793 GGGXLSXDPP 822
G G S PP
Sbjct: 331 GTG--SPPPP 338
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 643 GGGGGGGXXXPPPP--XGGGXXFLGG 572
GGG GGG PPPP GGG GG
Sbjct: 45 GGGCGGGCAPPPPPPACGGGCGGGGG 70
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 643 GGGGGGGXXXPPPP--XGGGXXFLGG 572
GGG GGG PPPP GGG GG
Sbjct: 102 GGGCGGGCAPPPPPPACGGGCGGGGG 127
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 698 GGGXXPPPPXFXXXFXFXGGGGGGG 624
GGG PPPP GGGGG G
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCG 73
Score = 29.1 bits (62), Expect(2) = 0.009
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 698 GGGXXPPPPXFXXXFXFXGGGGGGG 624
GGG PPPP GGGGG G
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCG 130
Score = 27.9 bits (59), Expect(2) = 0.009
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 821 GGSLDNXPPPPXXGGGAXXGXG 756
GG PPPP GGG G G
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGG 70
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG--G 798
PPPPPPP GG PPP P P PPP GG G
Sbjct: 726 PPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 799 GXLSXDPP 822
G PP
Sbjct: 783 GPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG--G 798
PPPPPPP GG PPP P P PPP GG G
Sbjct: 726 PPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 799 GXLSXDPP 822
G PP
Sbjct: 783 GPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG--G 798
PPPPPPP GG PPP P P PPP GG G
Sbjct: 309 PPPPPPPG---GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Query: 799 GXLSXDPP 822
G PP
Sbjct: 366 GPPPPPPP 373
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP PPP AP P PPP G GG
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAP-------PPPPPPPPSGAGGP 663
Query: 805 LS 810
S
Sbjct: 664 AS 665
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGG 798
PPPPPPP PPP A +P P PPP GG
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG----APPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP PPP AP P PPP G GG
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAP-------PPPPPPPPSGAGGP 489
Query: 805 LS 810
S
Sbjct: 490 AS 491
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGG 798
PPPPPPP PPP A +P P PPP GG
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG----APPPPPPPPPSGAGG 488
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGG 590
GGGGGG PPPP GG
Sbjct: 22 GGGGGGCCAPPPPPPCGG 39
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGG 590
GGGGG PPPP GGG
Sbjct: 23 GGGGGCCAPPPPPPCGGG 40
Score = 26.2 bits (55), Expect(2) = 0.30
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 820 GGXWITXPPPPXXGGGLXG 764
GG PPPP GGG G
Sbjct: 25 GGGCCAPPPPPPCGGGCGG 43
Score = 25.4 bits (53), Expect(2) = 0.30
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGGXXFLG 575
+ G GG GG P GGG + G
Sbjct: 70 YGGAGGFGGAYQAAPAIGGGGSYAG 94
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 32.3 bits (70), Expect = 0.47
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 637 GGGGGXXXPPPPXGGGXXFLGG 572
GGGGG PPP GGG GG
Sbjct: 266 GGGGGYPQPPPQQGGGGGGAGG 287
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGGXXFLGG 572
G GGGGG PP P GGG GG
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGG 64
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGGXXFLGG 572
G GGGGG PP P GGG GG
Sbjct: 65 GCGGGGGCAPPPAPCGGGCGGGGG 88
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGGXXFLGG 572
G GGGGG PP P GGG GG
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGG 64
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGGXXFLGG 572
G GGGGG PP P GGG GG
Sbjct: 65 GCGGGGGCAPPPAPCGGGCGGGGG 88
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXK---XFSPXPXKAPP 780
PPPPPPP K + GG PPP P + P P + PP
Sbjct: 122 PPPPPPPRK----SRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPP 602
+ GGGGGGG PPPP
Sbjct: 29 YSGGGGGGGDAAPPPP 44
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 643 GGGGGGGXXXPPPP 602
GGGGGG PPPP
Sbjct: 32 GGGGGGDAAPPPPP 45
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPPPP + G PPP P P PPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/73 (26%), Positives = 23/73 (31%), Gaps = 7/73 (9%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXK-------XFSPXPXKAPPP 783
P PPPP + GG PPP P + + P P PP
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 373
Query: 784 XXGGGGXLSXDPP 822
G G + PP
Sbjct: 374 PPSGHGMIPPPPP 386
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 628 PPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPP + G G PPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPP 320
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPPP + GG PPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPP 794
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPPPP + G PPP P P PPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/73 (26%), Positives = 23/73 (31%), Gaps = 7/73 (9%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXK-------XFSPXPXKAPPP 783
P PPPP + GG PPP P + + P P PP
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 383
Query: 784 XXGGGGXLSXDPP 822
G G + PP
Sbjct: 384 PPSGHGMIPPPPP 396
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 628 PPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPP + G G PPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPP 330
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPPP + GG PPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPP 794
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 643 GGGGGGGXXXPPPP 602
GGGGGGG PPPP
Sbjct: 35 GGGGGGGCCAPPPP 48
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGGXXFLGGK 569
GGGGGG PPPP G GG+
Sbjct: 36 GGGGGGCCAPPPPPPVCGGCGCGGR 60
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -1
Query: 779 GGAXXGXGEXFFXXXXXXXXXXXXXPXGGGXXPPPPXFXXXFXFXGGGGGGG 624
GG+ G +F GG PPP GGGGGGG
Sbjct: 10 GGSNTGAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVYMGAGGGGGGGG 61
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 640 GGGGGGXXXPPPPXGGG 590
GGG G PPPP GGG
Sbjct: 205 GGGSGRFPPPPPPYGGG 221
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGG 590
G GGG G PPPP GG
Sbjct: 203 GSGGGSGRFPPPPPPYGG 220
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGGXXFLGG 572
GGGGG G PPPP G GG
Sbjct: 22 GGGGGCGCAPPPPPPACGCGGGGG 45
>AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical
protein W08E12.3 protein.
Length = 140
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGG 590
F GG GGG PPPP GG
Sbjct: 21 FGGGCGGGPIFLPPPPCFGG 40
>AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.4 protein.
Length = 141
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGG 590
F GG GGG PPPP GG
Sbjct: 21 FEGGCGGGPIFLPPPPCFGG 40
>AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.5 protein.
Length = 141
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGG 590
F GG GGG PPPP GG
Sbjct: 21 FEGGCGGGPIFLPPPPCFGG 40
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGGXXFLGGKI 566
F GGGGGGG GGG GG I
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGGFGGGI 77
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 640 GGGGGGXXXPPPPXGGGXXFLGG 572
GGGGGG PPPP + G
Sbjct: 159 GGGGGGSVPPPPPAATAAVSMNG 181
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
P PP PP + G G P P P P PP G GG
Sbjct: 213 PGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGP-PGPPGQDGSGGA 271
Query: 805 LSXDPP 822
PP
Sbjct: 272 AQPGPP 277
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAP 777
P PPPP GGGG PP AP P K P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIPARPQVPKRP 837
>U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform c protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 640 GGGGGGXXXPPPPXGGGXXFLGGKI 566
GGGGGG PP P G GG +
Sbjct: 269 GGGGGGQITPPAPAGLNGVMGGGGV 293
>U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform b protein.
Length = 367
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 640 GGGGGGXXXPPPPXGGGXXFLGGKI 566
GGGGGG PP P G GG +
Sbjct: 319 GGGGGGQITPPAPAGLNGVMGGGGV 343
>U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform a protein.
Length = 444
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 640 GGGGGGXXXPPPPXGGGXXFLGGKI 566
GGGGGG PP P G GG +
Sbjct: 396 GGGGGGQITPPAPAGLNGVMGGGGV 420
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAP 777
P PPPP GGGG PP AP P K P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIPARPQVPKRP 837
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGGXXFLGGK 569
F GG GGGG GGG F GG+
Sbjct: 3 FRGGRGGGGGFRGGRGGGGGGGFRGGR 29
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = -1
Query: 779 GGAXXGXGEXFFXXXXXXXXXXXXXPXGGGXXPPPPXFXXXFXFXGGGGGGG 624
GG+ G +F GG PPP GGGGGG
Sbjct: 10 GGSNTGAQSAYFGVGGGPAGGGGGASKVGGAGAPPPGTSVYMGAGAGGGGGG 61
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGGXXFLGG 572
F GGGGGGG GGG GG
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGGFGG 75
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGGXXFLGG 572
F GGGGGGG GGG GG
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGGFGG 75
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 649 FXGGGGGGGXXXPPPPXGGGXXFLGG 572
F GGGGGGG GGG GG
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGGFGG 75
>AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like
(grd related) protein28 protein.
Length = 139
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGG 593
GGGGG G PPPP G
Sbjct: 26 GGGGGCGCGAPPPPSCG 42
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 652 VFXGGGGGGGXXXPPPPXGGG 590
+F GGGGG PPPP G
Sbjct: 18 LFPSGGGGGCGCAPPPPPACG 38
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPX-PXKAPPPXXG-GG 798
PPPP P G G PPP P F APPP G G
Sbjct: 707 PPPPGIPGYPPAPPPPGVG--PPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGA 764
Query: 799 GXLSXDPP 822
G +S PP
Sbjct: 765 GPMSSFPP 772
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXG 596
GG G GG PPPP G
Sbjct: 225 GGSGAGGAPRPPPPAG 240
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 643 GGGGGGGXXXPPPPXGGG 590
GGGGG G PPPP G
Sbjct: 25 GGGGGCGCGAPPPPPACG 42
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 23.8 bits (49), Expect(2) = 8.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 625 PPPPPPP 645
PPPPPPP
Sbjct: 157 PPPPPPP 163
Score = 22.6 bits (46), Expect(2) = 8.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 628 PPPPPPXKXK 657
PPPPPP + K
Sbjct: 173 PPPPPPAQQK 182
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 23.8 bits (49), Expect(2) = 8.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 625 PPPPPPP 645
PPPPPPP
Sbjct: 157 PPPPPPP 163
Score = 22.6 bits (46), Expect(2) = 8.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 628 PPPPPPXKXK 657
PPPPPP + K
Sbjct: 173 PPPPPPAQQK 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,150,651
Number of Sequences: 27780
Number of extensions: 176560
Number of successful extensions: 3395
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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