Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M12
(917 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme Rad31|Schiz... 69 9e-13
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 61 2e-10
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 48 2e-06
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 48 2e-06
SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces pomb... 45 2e-05
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 41 2e-04
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 36 0.008
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.23
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 31 0.30
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 27 4.9
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 27 4.9
SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizo... 26 6.5
SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces pom... 26 8.6
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 26 8.6
>SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme
Rad31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 68.9 bits (161), Expect = 9e-13
Identities = 32/77 (41%), Positives = 52/77 (67%)
Frame = +3
Query: 120 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 299
+GN+ + E YDRQIRLWG ++Q+ L+ ++VL+I S L EIAKN++L+G+ +
Sbjct: 1 MGNHNINAEEIAL--YDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGIGKL 58
Query: 300 CLLDNEKLKQIDLYSQF 350
C+LD+ + + D+ QF
Sbjct: 59 CVLDSMTVYEKDVEEQF 75
Score = 66.5 bits (155), Expect = 5e-12
Identities = 37/119 (31%), Positives = 61/119 (51%)
Frame = +1
Query: 280 SPV*KVCVC*TMRN*NKSICTPNFCVLLXKIGVNRAEGSLERARGLNPMVDVTSHTKGVD 459
S + K+CV +M K + F + IG RA ++ LNP+V++ + T +
Sbjct: 53 SGIGKLCVLDSMTVYEKDV-EEQFFIEASDIGQLRANVFKKKLHELNPLVEIDTDTSLIS 111
Query: 460 ELPDSFFTEFDVVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYS 636
E+ + ++F +V AT L E+F RIN R N F +G YG+ F DL++H ++
Sbjct: 112 EIDEGKISKFSMVIATQLDYEEFCRINELTRICNASFYATSCFGLYGFAFCDLINHNFA 170
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 61.3 bits (142), Expect = 2e-10
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +3
Query: 165 YDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYS 344
Y RQ+ + G ++ K++ + VLIIG GLG EIAKNV L GVKSV L D + + DL S
Sbjct: 20 YSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRIEDLSS 79
Query: 345 QF 350
Q+
Sbjct: 80 QY 81
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 48.0 bits (109), Expect = 2e-06
Identities = 19/54 (35%), Positives = 38/54 (70%)
Frame = +3
Query: 192 LDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFL 353
+++ + ++AKVL++G G+G E+ KN++++GVK V ++D + + +L QFL
Sbjct: 17 VEALRNFKSAKVLLVGAGGIGCELLKNLLMSGVKEVHIIDLDTIDLSNLNRQFL 70
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 47.6 bits (108), Expect = 2e-06
Identities = 19/57 (33%), Positives = 36/57 (63%)
Frame = +3
Query: 144 SEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 314
+ A+ ++YDRQ+RLW + Q + + V ++ + +G E KN+IL G+ S ++D+
Sbjct: 3 TSAKMQKYDRQVRLWKAEGQNAIEKSHVCLLYANTVGCEALKNLILPGIGSFAVVDD 59
>SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 401
Score = 44.8 bits (101), Expect = 2e-05
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +3
Query: 126 NNEVELSEAEAEQYDRQIRLW--GLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 299
+N +ELS E +Y RQ+ L GL Q L+ + VL+IG GLG + ++ G+ ++
Sbjct: 11 SNGLELSLDEYSRYGRQMLLSEIGLPGQLSLKRSSVLVIGAGGLGCPAMQYLVAAGIGTL 70
Query: 300 CLLDNEKLKQIDLYSQFL 353
++D + + + +L+ Q +
Sbjct: 71 GIMDGDVVDKSNLHRQII 88
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +3
Query: 195 DSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFL 353
++ K ++K+LIIG GLG EI K++ L+G + + ++D + + +L QFL
Sbjct: 37 ETLKSAFSSKILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNRQFL 89
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +3
Query: 159 EQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKL 323
EQ R +G D +RLR + V+++G G+G+ + + +GV+ + ++D +++
Sbjct: 107 EQLARNYAFFGEDGMERLRNSFVIVVGCGGVGSWVINMLARSGVQKIRIVDFDQV 161
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 459 IYALSMTCDIDHRIQASSSFQRTLCSIYADLVQEDTEIGSTDRFVSVSHCLT 304
+ +L D ++R QA S LC IYA ++Q+ + I T F S+ H L+
Sbjct: 3639 VSSLGYDHDFENRAQAVSM----LCQIYAIVIQKHSSISPTASFQSIGHELS 3686
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 141 LSEAEAEQYDRQIRLWGLDSQ---KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLD 311
LSE+ A + + W L Q R++ +K L++G LG +A+N++ GV+ V +D
Sbjct: 308 LSES-ASTLNLSLMRWRLVPQLDLDRIQNSKCLLLGAGTLGCGVARNLLSWGVRHVTFVD 366
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = +1
Query: 586 WGTYGYMFSDLVDHEYSEEIVQHKATKRGPDDEEKNARETVSITVKRRAIYVPLQ---NA 756
WG G D D EE+ +++A+ P DEE+ E S Y +
Sbjct: 929 WGFLGAPSDDEGDDSV-EEVSEYEASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEE 987
Query: 757 LSADWNSPEMRSR 795
DW+ E ++R
Sbjct: 988 SGEDWDELERKAR 1000
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 285 GVKSVCLLDNEKLKQIDLY 341
G SVCLL E LKQ +LY
Sbjct: 89 GTTSVCLLVGELLKQAELY 107
>SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase
Prs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 249 LGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPXQDRRKS 383
LG I I+T SVC + ++++LYSQ CP D ++
Sbjct: 240 LGHIIDDEEIITTPASVC--SEDYAQEVNLYSQGGCPSDDDEEEN 282
>SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +1
Query: 334 ICTPNFCVLLXKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFF 480
I + C++ G E +L+R NP+ + +HT D FF
Sbjct: 108 ITAKHTCIVYNSTGAIGVEEALQRQYPENPIFSLITHTPVSQRSVDEFF 156
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 8.6
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 361 LXKIGVNRAEGSLERARG-LNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQFERI 537
L KI +LER + LN +V TKG+D+L E + K+E RI
Sbjct: 265 LEKIREREVMITLERVKKILNAGANVILTTKGIDDLCLKSIIEAGAMAVRRCKKEDLRRI 324
Query: 538 NNA 546
A
Sbjct: 325 AKA 327
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,547,554
Number of Sequences: 5004
Number of extensions: 70010
Number of successful extensions: 217
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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