Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M12
(917 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24940.1 68417.m03572 SUMO activating enzyme 1a (SAE1a) ident... 77 2e-14
At5g50680.1 68418.m06280 SUMO activating enzyme 1b (SAE1b) ident... 70 2e-12
At5g50580.2 68418.m06266 SUMO activating enzyme, putative nearly... 70 2e-12
At5g50580.1 68418.m06265 SUMO activating enzyme, putative nearly... 70 2e-12
At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1... 68 1e-11
At2g30110.1 68415.m03664 ubiquitin activating enzyme 1 (UBA1) E1... 66 3e-11
At2g32410.1 68415.m03960 auxin-resistance protein, putative stro... 54 1e-07
At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1) id... 53 3e-07
At5g37530.1 68418.m04520 thiF family protein similar to SP|P3013... 43 2e-04
At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly ... 42 4e-04
At2g21470.1 68415.m02554 SUMO activating enzyme 2 (SAE2) nearly ... 42 4e-04
At5g19180.1 68418.m02284 ubiquitin activating enzyme, putative (... 39 0.004
At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1) id... 36 0.050
At5g55130.1 68418.m06872 molybdenum cofactor synthesis protein 3... 35 0.066
At5g19690.1 68418.m02342 oligosaccharyl transferase STT3 subunit... 31 0.81
At1g05350.1 68414.m00542 thiF family protein low similarity to S... 31 0.81
At1g76220.1 68414.m08851 hypothetical protein contains Pfam prof... 30 2.5
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 29 3.3
At4g10970.3 68417.m01785 expressed protein 29 3.3
At4g10970.2 68417.m01784 expressed protein 29 3.3
At4g10970.1 68417.m01783 expressed protein 29 3.3
At2g06120.1 68415.m00672 hypothetical protein contains Pfam prof... 29 4.3
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 29 5.7
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 29 5.7
At4g30860.1 68417.m04381 SET domain-containing protein low simil... 28 10.0
At2g44850.1 68415.m05584 expressed protein 28 10.0
At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subun... 28 10.0
>At4g24940.1 68417.m03572 SUMO activating enzyme 1a (SAE1a)
identical to SUMO activating enzyme 1a [Arabidopsis
thaliana] GI:22652850; contains Pfam profile PF00899:
ThiF family
Length = 322
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +3
Query: 138 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 317
EL+E E YDRQIR+WG ++Q+RL A +L+ G+ G AE KN++L GV SV L+D+
Sbjct: 5 ELTEQETALYDRQIRVWGANAQRRLTKAHILVSGIKGTVAEFCKNIVLAGVGSVTLMDDR 64
Query: 318 KLKQIDLYSQFLCPPXQD 371
L + FL PP ++
Sbjct: 65 LANMEALNANFLIPPDEN 82
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 373 GVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQFERINNACR 552
G AE + + NPMV V+ + L FF +FDVV + + +N CR
Sbjct: 86 GKTVAEICSDSLKDFNPMVRVSVEKGDLSMLGTDFFEQFDVVVIGYGSRATKKYVNEKCR 145
Query: 553 DSNKK--FICGDVWGTYGYMFSDLVDHEYSEE 642
K+ F D + G +F DL D++Y+++
Sbjct: 146 KLKKRVAFYTVDCRDSCGEIFVDLQDYKYTKK 177
>At5g50680.1 68418.m06280 SUMO activating enzyme 1b (SAE1b)
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50580;
contains Pfam profile PF00899: ThiF family
Length = 320
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +3
Query: 138 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 317
EL+E E YDRQIR+WG +Q+RL + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 318 KLKQIDLYSQFLCPPXQD 371
+ + FL P ++
Sbjct: 65 LVTTEVFNANFLILPDEN 82
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 370 IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQFERINNAC 549
+G AE + + NPMV V+ + L FF +FDVV + + +N C
Sbjct: 85 VGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKFDVVVIGYSSRATKKAVNEKC 144
Query: 550 RDSNK--KFICGDVWGTYGYMFSDLVDHEYSEE 642
R+ K F D G+ G +F DL +++Y+++
Sbjct: 145 RNLAKDVAFYTVDCRGSCGEIFVDLQNYKYTKK 177
>At5g50580.2 68418.m06266 SUMO activating enzyme, putative nearly
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50680;
contains Pfam profile PF00899: ThiF family
Length = 320
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +3
Query: 138 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 317
EL+E E YDRQIR+WG +Q+RL + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 318 KLKQIDLYSQFLCPPXQD 371
+ + FL P ++
Sbjct: 65 LVTTEVFNANFLILPDEN 82
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 370 IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQFERINNAC 549
+G AE + + NPMV V+ + L FF +FDVV + + +N C
Sbjct: 85 VGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKFDVVVIGYSSRATKKAVNEKC 144
Query: 550 RDSNK--KFICGDVWGTYGYMFSDLVDHEYSEE 642
R+ K F D G+ G +F DL +++Y+++
Sbjct: 145 RNLAKDVAFYTVDCRGSCGEIFVDLQNYKYTKK 177
>At5g50580.1 68418.m06265 SUMO activating enzyme, putative nearly
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50680;
contains Pfam profile PF00899: ThiF family
Length = 318
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +3
Query: 138 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 317
EL+E E YDRQIR+WG +Q+RL + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 318 KLKQIDLYSQFLCPPXQD 371
+ + FL P ++
Sbjct: 65 LVTTEVFNANFLILPDEN 82
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 370 IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQFERINNAC 549
+G AE + + NPMV V+ + L FF +FDVV + + +N C
Sbjct: 85 VGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKFDVVVIGYSSRATKKAVNEKC 144
Query: 550 RDSNK--KFICGDVWGTYGYMFSDLVDHEYSE 639
R+ K F D G+ G +F DL +++Y++
Sbjct: 145 RNLAKDVAFYTVDCRGSCGEIFVDLQNYKYTK 176
>At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1;
identical to gi:1703477
Length = 1077
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +3
Query: 123 GNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVC 302
GN+ E + + + RQ+ ++G ++ ++L A+ VLI G+ GLG EIAKN+IL GVKSV
Sbjct: 61 GNDNSNNQEIDEDLHSRQLAVYGRETMRKLFASNVLISGMQGLGVEIAKNIILAGVKSVT 120
Query: 303 LLDNEKLKQIDLYSQFL 353
L D ++ DL S F+
Sbjct: 121 LHDENVVELWDLSSNFV 137
Score = 46.0 bits (104), Expect = 4e-05
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +3
Query: 162 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 326
+YD QI ++G QK+L A+V ++G LG E KN+ L GV + + D++ ++
Sbjct: 471 RYDAQISVFGSTLQKKLEDARVFVVGAGALGCEFLKNLALMGVSCGTQGKLTVTDDDVIE 530
Query: 327 QIDLYSQFL 353
+ +L QFL
Sbjct: 531 KSNLSRQFL 539
>At2g30110.1 68415.m03664 ubiquitin activating enzyme 1 (UBA1) E1;
identical to GB:U80808
Length = 1080
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +3
Query: 147 EAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLK 326
E + + + RQ+ ++G ++ +RL A+ VLI G+ GLGAEIAKN+IL GVKSV L D ++
Sbjct: 72 EIDEDLHSRQLAVYGRETMRRLFASNVLISGMHGLGAEIAKNLILAGVKSVTLHDERVVE 131
Query: 327 QIDLYSQFL 353
DL S F+
Sbjct: 132 LWDLSSNFV 140
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 162 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 326
+YD QI ++G QK+L AKV +G LG E KN+ L GV + + D++ ++
Sbjct: 474 RYDAQISVFGAKFQKKLEDAKVFTVGSGALGCEFLKNLALMGVSCGSQGKLTVTDDDIIE 533
Query: 327 QIDLYSQFL 353
+ +L QFL
Sbjct: 534 KSNLSRQFL 542
>At2g32410.1 68415.m03960 auxin-resistance protein, putative strong
similarity to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family
Length = 523
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +3
Query: 162 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 341
+YDRQ+R+WG Q L A + ++ G+E KN+++ G+ S+ ++D K++ DL
Sbjct: 7 KYDRQLRIWGELGQSALETASICLLNCGPTGSEALKNLVIGGIGSITIVDGSKVEIGDLG 66
Query: 342 SQFLCPP---XQDRRKSSRGFV 398
+ F+ Q R K+ GF+
Sbjct: 67 NNFMVDAKSVGQSRAKTVCGFL 88
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Frame = +1
Query: 346 NFCVLLXKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL---PDSFFTEFDVVCATGLK 516
NF V +G +RA+ + LN V + D L SFF++F +V AT L
Sbjct: 68 NFMVDAKSVGQSRAKTVCGFLQELNDSVKANFVEENPDTLISTDPSFFSQFTLVIATQLV 127
Query: 517 QEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYSEEIVQHKATK---RGPDDEE 687
++ +++ CR++N + +G G++ + +H E H P E
Sbjct: 128 EDSMVKLDRICREANVMLVLARSYGLTGFVRISVKEHTAIETKPDHSLDDLRLNSPWPEL 187
Query: 688 KNARETVSITVKRRAIY 738
K+ E++ + V+ A +
Sbjct: 188 KSYVESIDLNVEEPAAH 204
>At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 540
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +3
Query: 162 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 341
+YDRQ+R+WG Q L A + ++ G+E KN++L GV S+ ++D K++ DL
Sbjct: 23 KYDRQLRIWGEVGQAALEEASICLLNCGPTGSEALKNLVLGGVGSITVVDGSKVQFGDLG 82
Query: 342 SQFL 353
+ F+
Sbjct: 83 NNFM 86
Score = 46.0 bits (104), Expect = 4e-05
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Frame = +1
Query: 346 NFCVLLXKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL---PDSFFTEFDVVCATGLK 516
NF V +G ++A+ + LN V+ + D L SFF++F +V AT L
Sbjct: 84 NFMVDAKSVGQSKAKSVCAFLQELNDSVNAKFIEENPDTLITTNPSFFSQFTLVIATQLV 143
Query: 517 QEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYSEEIVQH---KATKRGPDDEE 687
++ +++ CRD+N K + +G G++ + +H + H P E
Sbjct: 144 EDSMLKLDRICRDANVKLVLVRSYGLAGFVRISVKEHPIIDSKPDHFLDDLRLNNPWPEL 203
Query: 688 KNARETVSITVKRRA 732
K+ ET+ + V A
Sbjct: 204 KSFVETIDLNVSEPA 218
>At5g37530.1 68418.m04520 thiF family protein similar to SP|P30138
Adenylyltransferase thiF (EC 2.7.7.-) {Escherichia
coli}; contains Pfam profile PF00899: ThiF family
Length = 457
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/59 (32%), Positives = 38/59 (64%)
Frame = +3
Query: 147 EAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKL 323
E +E R I+ +GL+SQ ++ + V++IGL G+G+ A ++ +GV + L+D +++
Sbjct: 70 EIVSEHLTRNIQFFGLESQHKVTGSYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQV 128
>At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly
identical to SUMO activating enzyme 2 [Arabidopsis
thaliana] GI:22652854; contains Pfam profiles PF00899:
ThiF family, PF02134: Repeat in ubiquitin-activating
(UBA) protein
Length = 700
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +3
Query: 201 QKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFL 353
Q ++ AKVL++G G+G E+ K + L+G + + ++D + ++ +L QFL
Sbjct: 7 QSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFL 57
>At2g21470.1 68415.m02554 SUMO activating enzyme 2 (SAE2) nearly
identical to SUMO activating enzyme 2 [Arabidopsis
thaliana] GI:22652854; contains Pfam profiles PF00899:
ThiF family, PF02134: Repeat in ubiquitin-activating
(UBA) protein
Length = 625
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +3
Query: 201 QKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFL 353
Q ++ AKVL++G G+G E+ K + L+G + + ++D + ++ +L QFL
Sbjct: 7 QSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFL 57
>At5g19180.1 68418.m02284 ubiquitin activating enzyme, putative
(ECR1) identical to putative ubiquitin activating enzyme
E1 [Arabidopsis thaliana] GI:2952433; similar to NEDD8
activating enzyme [Mus musculus] GI:17061821
Length = 454
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/44 (34%), Positives = 32/44 (72%)
Frame = +3
Query: 222 KVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFL 353
++L+IG GLG E+ K++ L+G +++ ++D ++++ +L QFL
Sbjct: 48 RILVIGAGGLGCELLKDLALSGFRNLEVIDMDRIEVTNLNRQFL 91
>At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 436
Score = 35.5 bits (78), Expect = 0.050
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +1
Query: 457 DELPDSFFTEFDVVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYS 636
++ P+ FFT +V AT L ++ +++ CRD+N K + +G G++ + +H
Sbjct: 23 NQKPNLFFT---LVIATQLVEDSMLKLDRICRDANVKLVLVRSYGLAGFVRISVKEHPII 79
Query: 637 EEIVQH---KATKRGPDDEEKNARETVSITVKRRA 732
+ H P E K+ ET+ + V A
Sbjct: 80 DSKPDHFLDDLRLNNPWPELKSFVETIDLNVSEPA 114
>At5g55130.1 68418.m06872 molybdenum cofactor synthesis protein 3 /
molybdopterin synthase sulphurylase (CNX5) identical to
SP|Q9ZNW0 Molybdenum cofactor synthesis protein 3
(Molybdopterin synthase sulfurylase) (MPT synthase
sulfurylase) {Arabidopsis thaliana}; contains Pfam
profiles PF00899: ThiF family, PF00581: Rhodanese-like
domain, PF05237: MoeZ/MoeB domain
Length = 464
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +3
Query: 141 LSEAEAEQYDRQIRL--WGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 314
LS + +Y RQ+ L + ++ Q L + VL+IG GLG+ + GV + ++D+
Sbjct: 64 LSPDQIYRYSRQLLLPSFAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGIIDH 123
Query: 315 EKLKQIDLYSQFL 353
+ ++ +++ Q +
Sbjct: 124 DVVELNNMHRQII 136
>At5g19690.1 68418.m02342 oligosaccharyl transferase STT3 subunit
family protein similar to SP|P39007 Oligosaccharyl
transferase STT3 subunit {Saccharomyces cerevisiae};
contains Pfam profile PF02516: Oligosaccharyl
transferase STT3 subunit
Length = 779
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +1
Query: 637 EEIVQHKATKRGPDDEEKNA-RETVSITVKRRAIYVPLQNALSA 765
EEIV+ +++K+G E + A + +V +K++A+ +PL+ ++ A
Sbjct: 478 EEIVKERSSKKGKKKEREPADKPSVKAKIKKKALVLPLEASIVA 521
>At1g05350.1 68414.m00542 thiF family protein low similarity to
SP|P30138 Adenylyltransferase thiF (EC 2.7.7.-)
{Escherichia coli}; contains Pfam profile PF00899: ThiF
family
Length = 445
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +3
Query: 180 RLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCP 359
R+ +D+ +R+R V I+G+ G+G+ A+ + G+ + L D + ++ ++ F P
Sbjct: 70 RMGIVDNYERIREFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNRLFFRP 129
>At1g76220.1 68414.m08851 hypothetical protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 256
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 661 TKRGPDDEEKNARETVSITVKRRAIYVPLQNALSADWNSPEMRSRLRRGDCG 816
+K G D E ARET + KRRA L + E + R R+ DCG
Sbjct: 115 SKSGEDQEAFVARETDAYVFKRRA----LSRTIVKQLKKTEEKMRKRKRDCG 162
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +3
Query: 309 DNEKLKQIDLYSQFLCPPXQDRRKSSRGFVGKSSRL 416
+ EK K D+YSQFL D RKSSR GK + L
Sbjct: 1099 ETEKQKLYDIYSQFL-----DSRKSSREAKGKRATL 1129
>At4g10970.3 68417.m01785 expressed protein
Length = 217
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 342 SQFLCPPXQDRRKSSRGFVGKSSRLESD 425
S+F+ PP Q+R S RGFVGK + + +
Sbjct: 120 SRFIAPPAQNRA-SQRGFVGKQQQQQRE 146
>At4g10970.2 68417.m01784 expressed protein
Length = 217
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 342 SQFLCPPXQDRRKSSRGFVGKSSRLESD 425
S+F+ PP Q+R S RGFVGK + + +
Sbjct: 120 SRFIAPPAQNRA-SQRGFVGKQQQQQRE 146
>At4g10970.1 68417.m01783 expressed protein
Length = 217
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 342 SQFLCPPXQDRRKSSRGFVGKSSRLESD 425
S+F+ PP Q+R S RGFVGK + + +
Sbjct: 120 SRFIAPPAQNRA-SQRGFVGKQQQQQRE 146
>At2g06120.1 68415.m00672 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 473
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 511 LKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYSEEI 645
L + F+ +N +D +KK+ +G YG SD+ ++E E I
Sbjct: 286 LMENGFKSMNKRMKDFSKKYEDTGTYGAYGSKESDVRENELDEGI 330
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 DRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-SVC 302
D+Q++ W L+ K +R+ + G+ L +V+LTG + SVC
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 DRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-SVC 302
D+Q++ W L+ K +R+ + G+ L +V+LTG + SVC
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVC 278
>At4g30860.1 68417.m04381 SET domain-containing protein low
similarity to IL-5 promoter REII-region-binding protein
[Homo sapiens] GI:12642795; contains Pfam profile
PF00856: SET domain
Length = 497
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 693 CPRNSFYNSKTSSYICPASECFI 761
C + S SK+S + CP ECF+
Sbjct: 149 CAKESLGFSKSSKFKCPQHECFV 171
>At2g44850.1 68415.m05584 expressed protein
Length = 400
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 414 ASSSFQRTLCSIYADLVQEDTEIGSTDRFVSVSHC 310
ASSS L S ++++E T++ D+ SV HC
Sbjct: 199 ASSSIVSLLSSCLHEVLKEGTDVCLIDQIASVHHC 233
>At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subunit
family protein low similarity to RNA polymerase IIA
largest subunit [Trypanosoma brucei] GI:162215; contains
InterPro accession IPR000722: RNA polymerase, alpha
subunit
Length = 1453
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 240 LSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPP 362
L LG + L V+ C L+ +++Q+ +Y F PP
Sbjct: 486 LLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPP 526
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,281,992
Number of Sequences: 28952
Number of extensions: 363410
Number of successful extensions: 1063
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2178500352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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