Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M08
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 132 1e-29
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 100 4e-20
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 97 5e-19
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 80 8e-14
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 79 2e-13
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 78 2e-13
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 67 6e-10
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 66 8e-10
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 66 1e-09
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 60 9e-08
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 59 2e-07
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 58 4e-07
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 58 4e-07
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 54 4e-06
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 54 5e-06
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 52 1e-05
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 51 4e-05
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 48 3e-04
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 47 5e-04
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 46 0.001
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 46 0.001
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 41 0.046
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.046
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 36 1.7
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 35 2.3
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 35 3.0
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill... 33 7.0
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 33 9.3
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae... 33 9.3
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 132 bits (319), Expect = 1e-29
Identities = 68/109 (62%), Positives = 74/109 (67%)
Frame = +2
Query: 134 QAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 313
+AELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNI
Sbjct: 4 KAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNI 63
Query: 314 GSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
GSGV SDDDMGFGLFD
Sbjct: 64 GSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 100 bits (240), Expect = 4e-20
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +2
Query: 146 ACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGV 325
+C YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGINV+DLITNIGSGV
Sbjct: 18 SCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIGSGV 75
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 97.1 bits (231), Expect = 5e-19
Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 137 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 316
+ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G
Sbjct: 5 SELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVG 64
Query: 317 SG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
+G SDDDMGFGLFD
Sbjct: 65 AGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 88.2 bits (209), Expect = 2e-16
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +2
Query: 152 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 319
VYSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 79.8 bits (188), Expect = 8e-14
Identities = 43/108 (39%), Positives = 54/108 (50%)
Frame = +2
Query: 137 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 316
+ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI N+G
Sbjct: 4 SELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVG 63
Query: 317 SGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
+G S+DDM GLFD
Sbjct: 64 AGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +2
Query: 137 AELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLITNI 313
AELA Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+ N+
Sbjct: 4 AELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLLNV 63
Query: 314 GSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
GSG SDDDMGFGLFD
Sbjct: 64 GSG--GGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKEESDDDMGFGLFD 110
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/114 (41%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Frame = +2
Query: 134 QAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLITN 310
++ELACVY+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+ +
Sbjct: 3 KSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLMS 62
Query: 311 IGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDD----MGFGLFD 460
+GS SDDD +GFGLFD
Sbjct: 63 MGSPAPSAAVTSAVPTAASATSAAAEKPKEAVKEEKKVVSDDDSDESIGFGLFD 116
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +2
Query: 131 QQAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN 310
Q EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL NV D++
Sbjct: 13 QVQELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAG 72
Query: 311 IGS 319
G+
Sbjct: 73 CGA 75
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 66.5 bits (155), Expect = 8e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 227 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGV 325
A VD+EPYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/64 (46%), Positives = 47/64 (73%)
Frame = +2
Query: 131 QQAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN 310
Q+ EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++ L++
Sbjct: 13 QREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLSA 72
Query: 311 IGSG 322
+GSG
Sbjct: 73 VGSG 76
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +2
Query: 140 ELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLITNIG 316
E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D++T +
Sbjct: 6 ERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDILTEVA 65
Query: 317 S 319
S
Sbjct: 66 S 66
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +2
Query: 140 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 286
+ C+YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 59.7 bits (138), Expect = 9e-08
Identities = 37/107 (34%), Positives = 49/107 (45%)
Frame = +2
Query: 140 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 319
E A Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG ++++ N +
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
Query: 320 GVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
SDDDMGFGLFD
Sbjct: 64 A----PAAAAAGGAAGGGAAAEEAAEEEKEEEAKEESDDDMGFGLFD 106
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 58.8 bits (136), Expect = 2e-07
Identities = 26/65 (40%), Positives = 43/65 (66%)
Frame = +2
Query: 128 CQQAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 307
C++ EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++ L++
Sbjct: 12 CEKQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLS 71
Query: 308 NIGSG 322
N+ G
Sbjct: 72 NLSVG 76
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +2
Query: 131 QQAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN 310
Q E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T
Sbjct: 2 QSQETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTT 61
Query: 311 IGS 319
+GS
Sbjct: 62 LGS 64
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 57.6 bits (133), Expect = 4e-07
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 137 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNI 313
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 314 GS 319
GS
Sbjct: 77 GS 78
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 54.4 bits (125), Expect = 4e-06
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +2
Query: 137 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 316
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 317 SG 322
G
Sbjct: 63 LG 64
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 54.0 bits (124), Expect = 5e-06
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +2
Query: 131 QQAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN 310
Q ELA +AL++ + +T E I+T+L A + VE +WP + AKAL N+ DLI +
Sbjct: 6 QHQELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMD 65
Query: 311 IGS 319
GS
Sbjct: 66 AGS 68
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/106 (30%), Positives = 45/106 (42%)
Frame = +2
Query: 143 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 322
LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+ +
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMAAAAAQ 65
Query: 323 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
DDDMGFGLFD
Sbjct: 66 APTAASAPSPAAGAASAAAAGGKVEDKKKDEPEEEGDDDMGFGLFD 111
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/102 (28%), Positives = 47/102 (46%)
Frame = +2
Query: 155 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXX 334
++A IL D + +T + + TI KAA +V+ W ++AKALEG +++++++ +
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNA---G 64
Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
SDDDMGFGLFD
Sbjct: 65 PVAGAGAASGAAAAGGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 48.0 bits (109), Expect = 3e-04
Identities = 33/106 (31%), Positives = 44/106 (41%)
Frame = +2
Query: 143 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 322
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+ +
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM----AA 61
Query: 323 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
DDDMGFGLFD
Sbjct: 62 AATQAPTATSAAAAPAAGEASGKAEEKKKEEPEEEGDDDMGFGLFD 107
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +2
Query: 131 QQAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 283
++ ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 118 EKQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 46.4 bits (105), Expect = 0.001
Identities = 33/108 (30%), Positives = 44/108 (40%)
Frame = +2
Query: 137 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 316
A+LAC Y+ALIL + I + KAA V+V FA AL +NV +++ +I
Sbjct: 4 AQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLGSIS 62
Query: 317 SGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
G +DDDMGFGLFD
Sbjct: 63 FG--GAAAGGAAAPAAAAAASGAAPAAAAAKEEPEEDADDDMGFGLFD 108
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/107 (28%), Positives = 43/107 (40%)
Frame = +2
Query: 140 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 319
+LAC Y+ALIL D + + + KAA VDV FA L+ +++ D+++ +
Sbjct: 6 QLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVLSKVSF 64
Query: 320 GVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
G DDDMGFGLFD
Sbjct: 65 G--GVAPAAGGATAAPAAAAAAAAPAAAAAKKEEEEEDDDMGFGLFD 109
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 40.7 bits (91), Expect = 0.046
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 146 ACVYSALILVDDDVAVTGEKISTIL-KAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 319
AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+ + + I N GS
Sbjct: 8 ACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIASTIANGGS 66
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.046
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 140 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 253
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 152 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
VY+AL+L +T + + +L+AA V+V+ ALEG+N+ + I
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 35.1 bits (77), Expect = 2.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 152 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
VY+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 34.7 bits (76), Expect = 3.0
Identities = 24/86 (27%), Positives = 32/86 (37%)
Frame = +2
Query: 203 KISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXX 382
KI IL++ +++E ALEG +V +LIT +
Sbjct: 21 KIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAGPASAGGAAAASG 80
Query: 383 XXXXXXXXXXXXXXXSDDDMGFGLFD 460
SDDDMGFGLFD
Sbjct: 81 DAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
Guillardia theta|Rep: Acidic ribosomal protein P1 -
Guillardia theta (Cryptomonas phi)
Length = 104
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +2
Query: 143 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRD 298
++C+ S LIL ++ + +T + IS +LK + +VE Y+ F + ++ ++
Sbjct: 10 ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFERISASLDEKE 61
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 33.1 bits (72), Expect = 9.3
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +2
Query: 167 ILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 313
+L + VT E+ ST+ + A+D++ PG+F++ L G ++ L ++
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
horikoshii
Length = 108
Score = 33.1 bits (72), Expect = 9.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 152 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
VY+AL+L + E + +L+AA V+ E ALEG+N+ ++I
Sbjct: 4 VYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVI 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,268,961
Number of Sequences: 1657284
Number of extensions: 8022325
Number of successful extensions: 18283
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 17920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18267
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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