Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M03
(1079 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 34 0.22
06_02_0175 - 12624608-12625297 33 0.52
07_03_0559 + 19475893-19476783 31 2.1
07_03_0558 + 19461369-19462448 30 2.8
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 30 3.7
07_03_0560 + 19479597-19480667 29 4.8
10_08_0214 - 15915156-15915713 29 6.4
06_01_0690 + 5033943-5034740 29 6.4
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 29 6.4
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 29 6.4
06_01_0553 + 3942907-3943617 29 8.4
03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759 29 8.4
01_01_0570 - 4231100-4232560 29 8.4
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 33.9 bits (74), Expect = 0.22
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -1
Query: 242 PPXPPGGGGXXXXXXXKKKKXXKKXKXKKEKK 147
PP P GG KKKK KK K KK+KK
Sbjct: 14 PPAEPAKGGLRGLPKKKKKKKKKKKKKKKKKK 45
>06_02_0175 - 12624608-12625297
Length = 229
Score = 32.7 bits (71), Expect = 0.52
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 669 GGGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GGG W G WG W G G GG G G GGGG G
Sbjct: 68 GGGGGGGSSGGSSWSYGWGWG--WGTDSGGGGSSGGGGGGGGGGGGGGGGGGG 118
>07_03_0559 + 19475893-19476783
Length = 296
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -3
Query: 669 GGGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GGG G G G G G C GVGG G G GGGG G
Sbjct: 78 GGGLGGGGGFGGGGGGGLGGGGCEGGGFGG-----GVGGGSGAGGGLGGGGGG 125
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = -3
Query: 669 GGGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GGG G G GVG G G GVGG G G GGGG G
Sbjct: 120 GGGGGGGFGGGSGGGVGGGGGQ-----GGGFGAGGGVGGGSGTGGGLGGGGGG 167
>07_03_0558 + 19461369-19462448
Length = 359
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -3
Query: 666 GGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GG V G G G G G GV G GG G G GGGG G
Sbjct: 270 GGGVGGGGGFGGGGGGGLGGGHGSGFGGGAGVGGGAGGGVGGGGGFGGGGGG 321
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -3
Query: 666 GGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GG V G G G G G GV G GG G G GGGG G
Sbjct: 306 GGGVGGGGGFGGGGGGGLGGGHGGGFGAGAGVGGGAGGGVGGGGGFGGGGGG 357
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -3
Query: 666 GGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GG + G G G G G GV G GG G G GGGG G
Sbjct: 234 GGGIGGGGGFGGGGGGGLGGGHGGGFGGGAGVGSGAGGGVGGGGGFGGGGGG 285
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 522 RPPXPPQHXXHPRPXSKPP 578
RPP PP PRP S PP
Sbjct: 79 RPPSPPPQQQQPRPVSPPP 97
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = -3
Query: 669 GGGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GGG G G GVG G G GVGG G G GGGG G
Sbjct: 125 GGGGGGGLGGGGGGGVGGGGGQ-----GGGFGAGGGVGGGSGTGGGLGGGGGG 172
>10_08_0214 - 15915156-15915713
Length = 185
Score = 29.1 bits (62), Expect = 6.4
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = -3
Query: 669 GGGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGG 517
GGG R G G G G G + GVGG G G GGGG
Sbjct: 70 GGGYGRGGGGGGGGGEGGGSGSGYGSGQGSGYGA-GVGGAGGYGSGGGGGG 119
>06_01_0690 + 5033943-5034740
Length = 265
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 669 GGGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GGG G GWG G G G GG G G GG G G
Sbjct: 36 GGGGGGGSGNGSGWGSGSGSGYGQASGPGGYASGGGGGGGGGGGGGNGGSGYG 88
>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 62 FFFFFFFFFFFFFFFF 77
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 63 FFFFFFFFFFFFFFFF 78
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 64 FFFFFFFFFFFFFFFF 79
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 65 FFFFFFFFFFFFFFFF 80
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 66 FFFFFFFFFFFFFFFF 81
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 67 FFFFFFFFFFFFFFFF 82
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 68 FFFFFFFFFFFFFFFF 83
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 69 FFFFFFFFFFFFFFFF 84
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 70 FFFFFFFFFFFFFFFF 85
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 71 FFFFFFFFFFFFFFFF 86
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 87 FFFFFFFFFFFFFFFF 102
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 88 FFFFFFFFFFFFFFFF 103
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 89 FFFFFFFFFFFFFFFF 104
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 90 FFFFFFFFFFFFFFFF 105
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 91 FFFFFFFFFFFFFFFF 106
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 92 FFFFFFFFFFFFFFFF 107
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 147 FFFFLXFXFFXXFFFF 194
FFFF F FF FFFF
Sbjct: 93 FFFFFFFFFFFFFFFF 108
>06_01_0553 + 3942907-3943617
Length = 236
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 519 PRPPXPPQHXXHPRPXSKPP 578
PRPP PPQ PR + PP
Sbjct: 117 PRPPPPPQLWKPPRARAPPP 136
>03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759
Length = 417
Score = 28.7 bits (61), Expect = 8.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 PRPPXPPQHXXHPR 560
PRPP PPQH H R
Sbjct: 205 PRPPSPPQHPRHRR 218
>01_01_0570 - 4231100-4232560
Length = 486
Score = 28.7 bits (61), Expect = 8.4
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -3
Query: 666 GGXVRXXGXXXGWGVGXXWGXCWXXXXXXXGVLXGVGGXXXVGXGXGGGGXG 511
GG V G G G+G G G GVGG VG G GGG G
Sbjct: 204 GGGVGGGGELGGGGMGGGSGF-GGGAGGGFGAGGGVGGGIGVGGGMGGGASG 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,002,844
Number of Sequences: 37544
Number of extensions: 221723
Number of successful extensions: 1708
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3222906096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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