Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M02
         (866 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    47   5e-04
UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    46   0.002
UniRef50_Q8ID63 Cluster: Putative uncharacterized protein MAL13P...    33   9.4  

>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 47.2 bits (107), Expect = 5e-04
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -1

Query: 251 LKLEGGWTDLANFGLELFVEVQRRFK 174
           LKLE GWTDLANFGLEL VEVQR  K
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 20/25 (80%), Positives = 20/25 (80%)
 Frame = +3

Query: 72  LKTNKRIRPTGDTSKRKQNCYFYLI 146
           LK  K IR TGDTSK KQNCYFYLI
Sbjct: 46  LKQTKGIRQTGDTSKEKQNCYFYLI 70



 Score = 35.5 bits (78), Expect = 1.8
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +1

Query: 43  KRPKLLYNINLKQTKGFVRQGTHQRENK 126
           KRPK LY INLKQTKG  + G   +E +
Sbjct: 36  KRPKHLYKINLKQTKGIRQTGDTSKEKQ 63


>UniRef50_Q8ID63 Cluster: Putative uncharacterized protein
            MAL13P1.323; n=2; Plasmodium|Rep: Putative
            uncharacterized protein MAL13P1.323 - Plasmodium
            falciparum (isolate 3D7)
          Length = 3265

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 755  LRTLSFDRKYFLECLNTLLCEKLFYFLLHIHTIDIFVLQFNEN 627
            L+  +F++ Y LE    L  EK FY  + ++ + IFV + N+N
Sbjct: 2309 LKKFNFNKIYNLETFKELKLEKKFYENIELYLLSIFVFEKNKN 2351


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,975,160
Number of Sequences: 1657284
Number of extensions: 11017926
Number of successful extensions: 23334
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23330
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)