Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M02
         (866 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    28   0.083
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   4.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.4  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 0.083
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
 Frame = +2

Query: 650 IYLLY-VCVRENKTVF-----HTIMYLSIPRNIFYQNLRFVMTSLV 769
           + ++Y +CV+  K+VF     HT+ Y     + FYQ L +++T ++
Sbjct: 129 VVIIYSICVQTEKSVFDFLCRHTVEYFQNYIHFFYQLLLYLITDMI 174


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 727 ISWNA*IHYCVKNCFIFSYTYI 662
           ++W A + +C+    IF+YT +
Sbjct: 162 LAWVASLAFCIPQLTIFTYTSV 183


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 852 IIYEIIRHHIYLISH*ASY*LILN*TFWTRLVITNLKF 739
           I+  I     YLIS+   +  ++  TFW+   I N+ +
Sbjct: 248 IVVSIFYMSAYLISNPIMWDRVMLLTFWSAFFIVNVLY 285


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 728 YFLECLNTLLCEKLFYFLLHIHTIDIFVL 642
           YF      LLC   FY+   I T+ +  L
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFL 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,787
Number of Sequences: 336
Number of extensions: 3441
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)